Ctenopharyngodon idella (grass carp): 127516335
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Entry
127516335 CDS
T08802
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127516335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127516335
03400 DNA repair and recombination proteins [BR:
cide03400
]
127516335
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
127516335
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
127516335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
Cnd1
EnP1_C
PI-TkoII_IV
Motif
Other DBs
NCBI-GeneID:
127516335
NCBI-ProteinID:
XP_051756820
LinkDB
All DBs
Position
1:complement(20759950..20797070)
Genome browser
AA seq
1415 aa
AA seq
DB search
MMEFPQQPQQQRPAGDGKIIYPLGVKEITDKISNDEVVKRLKLVVKTYMDMDQDSEEEKQ
QYLALALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQL
KGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQ
MHMLDLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLAKTLLKRTVQTIETCIA
SFFNQVLVMGKSSVSDLSEHVFDLIQELFAIDPLLLVSVMPQLEFKLKSNDGEERLAVVK
LLAKLFGAKDSELATQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTEF
LKVRSHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGFVRERMLDKRWRVRKEAMMGLAQ
LYKKYCLHHEAGKESALKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYMVPHSLETEEKM
KCLYYLYACLDTNAVKALNEMWKCQNMLRGLVRELLDLHKLPTSEANTTAMFGKLMTIAK
NLPDPGKAQDFMKKFNQVLGEDEKLRLQLEQLISPTCSCKQAEQCVREITRKLTFPKQPT
NPFLEMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEDEGVTPDTAIRAGLELLK
VLSFTHPTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELPQIRSTLIPIL
HQKAKRGTPHQAKQAVHCIHAIFHNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHIS
MLAPDQFASPMKSIVANFIVKDLLMNDRSVGNKNGRLWTADDEVSPEVLAKVQAIKLLVR
WLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRLAAGSAIMKLAQEPC
YHDIITPEQFQLCGLVINDECYQVRQIFAQKLHVALVKLLLPLEYMAVFALCAKDPVKER
RAHARQCLLKNISVRREYIKQNPMAHEKLLSLLPEYVVPYMIHLLAHDPDLTKPQDLEQI
RDVKECLWFMLEVLMTKNENNSHSFLRKMVENIKQTKDAQAPDDPKANEKLYIVCDVALF
VIANKSTSCHLDSPKDPVLPSKFFTPPDKEFVNDKEYLSPEAKVVLQTGKIQQPPKQTGV
LGAVNKPLTVTARRPFIKTTTADTVSNASTNSQPSSPATNKSRDVNSEASETGARENEEN
PVITKAGGVKKDEAAQPSGKKRAAPASDGTENSVSPNPSAGSQPPANKPRRGRPPKNPAG
VATPDKEAGATTGGGSGRGRKRAAPAQDPATTASADSISGKTPKQQKEAEPKRAGPQRQI
DLQRSVRVAQREQQAYQDIRLSQKTYGSEGETEREFESSPEYVLSLTQLQEQQEEAILKQ
LRGAAGPKMRESTYAAEQGELSVKRRFVKTRTVRQ
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgatggagttcccgcagcagcctcagcagcaaagaccagcgggggacggaaagatcatc
tacccactgggtgtcaaagagatcactgataagatcagcaacgatgaagtcgtcaaacga
ctcaagctggtggtcaagacatacatggacatggatcaagactcagaggaggaaaagcag
cagtatttggctctggctcttcacctggcctctgaattcttcctgcgaaaccccaacaag
gatgtacggttactcgtggcctgctgtctcgctgacatcttcaggatctacgctccggag
gccccatacacctcacatgacaagctcaaggaaatttttctcttcattactcggcagttg
aagggattagaggacactaagagccctcagtttaacagatatttttacttgctagagaac
ctggcatgggtgaagtcctacaacatctgttttgaattggaagactgtaatgagatcttc
atccagctcttcaaaactctcttttctgtcatcaataacagccataatcagaaggtgcag
atgcacatgttggacctgatgagttccatcatcatggagggggatggagtgacgcaggag
ctgctagacacaatcctcatcaacctcatccctgctcacaaaaacttgaataagcaggca
tatgacctggccaagactcttctgaaaagaacggttcagaccatcgaaacctgtatcgcc
tcattctttaatcaggtgttggttatgggaaagtcctccgtgagtgatctgtcggagcat
gtatttgacctcattcaggagctctttgcaattgaccctctgctcctcgtatctgtgatg
ccacaacttgagtttaaattaaagagtaatgatggagaggagaggttggctgtggttaaa
ttgttggctaaactctttggagcaaaagactctgaactggctacccagaatcgcccactc
tggcagtgttttctgggcaggttcaatgacattcatgttcctgtgagactggaatgtgtg
aagtttgctagccactgcctgatgaaccacccagatcttgccaaggatcttacagagttt
ctgaaagtgagatcacatgaccctgaggaggcaatcagacatgatgtcattgtgaccatc
atcaacgcagggaagaaagacctgaacctggtgaatgatcaactgctggggttcgtcaga
gagaggatgttggacaagaggtggcgtgtccgtaaagaagcaatgatgggtttggctcag
ctgtataagaagtactgtctgcaccatgaggctgggaaggagtctgctttgaaaatcagc
tggatcaaagacaaactcttacacatctactaccagaacagcatagatgacaagttgttg
gtggagaagatctttgcacagtacatggttcctcacagtttggagactgaggagaagatg
aagtgtctgtactacctttatgcatgtctggacactaacgctgtcaaagcactgaatgaa
atgtggaagtgtcagaatatgttgagaggactggttcgagaactgctggacttacacaaa
ctgcctacatctgaagcaaacaccacagcaatgttcggaaaacttatgaccatcgctaag
aatctcccagacccaggcaaagctcaggactttatgaagaagtttaatcaggttctgggt
gaagatgagaaactacgtcttcagcttgagcaactcatcagccccacctgctcatgtaaa
caggctgaacagtgtgtgagggaaatcacacggaagctgacattccccaagcagcccaca
aacccattcctggagatggtgaaattcctgctggagagaatcgcaccagtgcacattgac
tctgaggccataagtgccctggttaagctgttaaataagtcaattgagggcactgctgat
gatgaagatgagggagttactcctgatactgccatccgcgctggacttgagttgctcaag
gttttgtcatttactcaccccactgcgttccactcagctgagacatacgagtctttgctg
cagtgtctgaagatggaggacgataaagtggcggaagcagcaatacagatcttcagaaac
acaggacaaaagattgagacagaactgccacaaatccgctccactctaattcccatacta
catcagaaggcaaagcgaggcaccccccaccaggccaaacaggcggtccactgcatccat
gccatctttcacaacaaagaggtccagttagcgcaaatatttgagccattgtcacgcagt
ctgaatgcagatgtgcctgaacagctgatcactccactcgtgtctcttggacacatctcc
atgctggccccggatcaatttgcgtcacccatgaagtcaatcgtagctaatttcatcgtg
aaggaccttctgatgaatgacagatctgtgggaaacaagaatgggcggctctggacagct
gatgatgaggtttcccctgaagtgctggctaaggtgcaagccattaagctgttggtccgc
tggttgttgggaatgaagaataatcagtctaaatccgctaactctactctcagactcctc
tcagccatgctggtcagtgagggagacctcaccgagcagaagaaaatcagcaagtctgac
atgtctcgactgaggcttgcagcggggagcgccatcatgaaactggcacaagagccttgt
taccatgacatcatcactccagaacagttccagctctgtggactcgtcattaatgatgag
tgctatcaggtgcggcagatctttgctcagaagttacatgttgctctggtgaagttgttg
ttgccactggagtacatggctgtgtttgctttgtgcgctaaagacccagtgaaagagcga
cgtgctcatgcccgacagtgcctgctcaagaacatcagtgtccgcagagagtacatcaaa
cagaatcccatggcccatgaaaagctgctgtctctcctgccagaatatgtggtgccatac
atgatccatcttctagctcatgatccagaccttaccaaaccgcaggatttggagcagatc
agagatgtcaaagagtgcttgtggttcatgctggaggtgttgatgacaaagaatgagaat
aacagtcactcatttctgaggaagatggtagagaacatcaaacaaacaaaagatgcacag
gccccagatgacccaaaggcaaacgagaaactttacattgtgtgtgatgtggcattattt
gtgatcgcaaacaagagcacttcatgtcatctggactccccaaaagatcctgtgctgcct
agcaagttctttaccccacctgataaggaatttgtcaatgataaggaatatctctcacca
gaggcaaaagtagttctgcagacagggaaaatccagcaaccaccaaagcagacaggtgta
ctgggggcagtgaacaaacctttaacggtaaccgctcgccggccgttcattaaaaccacc
actgccgacacagtgagcaacgcaagcactaactcccaacccagctcacctgcaacaaat
aagagcagggatgtaaattctgaggcttcagagactggggcaagggagaatgaagagaat
ccagtgatcacaaaagcaggaggtgtaaagaaggatgaggctgctcagcccagtgggaag
aaacgtgcggcacctgcaagtgacggcacggagaacagtgtgtctccaaacccctcagca
ggatcacagccccctgccaataaaccacgacgtggccgaccccctaaaaaccctgcaggt
gttgccacaccggataaagaggctggagctacaacagggggagggtctgggcggggccga
aagagagcagcacctgctcaggatcccgccaccacagcctcagctgattcaatcagtggc
aagacaccaaaacagcagaaagaagcagagccgaaaagagcggggccacagagacagata
gacctacaaagatcagtgagggtagcacagcgagaacagcaagcgtaccaagacatccgc
ctgtctcagaagacttatggaagtgaaggggagacagagagagaatttgagtccagccca
gagtatgtactctcactcacacagctacaggagcagcaggaagaagccattctcaagcag
ctcaggggtgcagcagggcctaaaatgagagaatccacgtatgcagcagagcagggggag
ctgtcagtaaagcgtcggttcgtgaagacaaggacggtcaggcagtaa
DBGET
integrated database retrieval system
