Ctenopharyngodon idella (grass carp): 127516353
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Entry
127516353 CDS
T08802
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127516353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127516353
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
NGL family
127516353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
LRR_14
Ig_3
ig
LRR_9
V-set
Ig_2
LRRNT
LRR_RPS2
DUF7617
LRRCT
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
127516353
NCBI-ProteinID:
XP_051756877
LinkDB
All DBs
Position
7:19071251..19101857
Genome browser
AA seq
631 aa
AA seq
DB search
MLNKMTSYHQRQMLRGPRWKGAWFDPLFLLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLKDVPDGISTNTRYLNLQDNQIQVIKVDSFKHLRHLEILQLSRNHIRNIEIGA
FNGLTSLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSRLPSLRRLDL
GELKRLSYISSGAFQGLSNLRYLNLGMCNLKEVPNIQPLIRLDELEMSGNQLTVIQPSSF
KGLVHLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLFTPLHHLQRVHLH
HNPWNCNCDILWLSWWLRETVPTNTSCCARCNSPPSLKGRYIGELDQSYFQCYAPIIVEP
PVDLNLTEGMAAELKCRTNSVTSVSWLTPNGSIITHGALKMRISVQNDGTLNFTNVTIQD
TGTYTCIVSNMLGNISASAVLNVTSVDNSGFSYFTTVTVETIETPIDGESRTPVQPSFGW
ASSSTTRGTPIATERAYTIPVTDIDIDGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHDGPSRTIEIINVHEELARVPAMESHLTLPPLEHNHYNHYNSYKTTYN
HVSTLSSLHSSVHEPLLIQASSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttaccatcagcgccagatgttgagaggtcctagatggaaa
ggggcttggtttgaccccttgtttctcctgcttttagccctgcagttgcttgttgttgcc
ggactggtgcgagcccagacctgtccctctgtgtgttcctgcagtaatcaatttagtaag
gtcatctgcacacgcagagggctaaaggatgtccctgatggcatctccaccaatacacgg
tatcttaaccttcaggacaatcaaatccaggtcatcaaagtagacagtttcaagcatcta
cgacaccttgagattcttcagcttagcagaaaccacatccgcaacattgagattggcgcc
tttaacggcttaaccagccttaacactctagagctttttgacaatcgcctcacgaccatc
ccaaatggcgcctttgagtatctatcaaaactgaaagagctgtggcttaggaataaccca
attgagagcataccgtctgatgccttcagtcgcttgccctccctgcggcggttggacttg
ggagagctgaagcgtctctcctacatctcaagtggagcatttcagggcttgagtaacctt
cgctacctgaatctgggcatgtgtaacctcaaagaggtccccaacattcagcccttgatt
cgcctggatgagctggagatgtccgggaaccagctcaccgtcatccaacccagttctttt
aagggtcttgtccatcttcagaagctgtggatgatgcacgcccaagtccaaaccatagag
cggaactccttcgatgacctgcactctttgcgagagctcaacctggctcacaacaacctt
acctttttgccccatgatctcttcacacctttgcaccacctgcagcgagtgcatttgcat
cacaatccctggaactgtaattgtgatattctttggctgagctggtggctgagagagacc
gtaccaacgaacaccagctgctgcgcacgctgtaattcccctcccagcctcaaggggcgc
tacataggtgagctggaccagagctactttcagtgctacgcccccattattgtcgaacca
cctgtcgacctcaatttgactgaaggaatggcagcagaactcaaatgtcggacaaattca
gtgacctcggtcagctggctaacaccaaatggctccatcataacacatggggcgctaaaa
atgcgcatttccgtccaaaacgacggaacgctaaatttcaccaatgtcaccatccaggac
acaggaacctacacttgcatcgtaagcaacatgctaggcaacatttcagcctctgctgtc
ctcaatgtgacatctgttgacaacagtggctttagttacttcactacggtcactgtagag
acgattgaaactcctatcgatggggagagtaggacaccggtgcagccttctttcggctgg
gcatcatcctcaaccacaaggggaacacccattgccactgagagagcgtacactattcct
gtgactgacatagacattgatggcgctctcaatggtttggaggaggtgatgaaaaccacc
aagattattatcggctgttttgtggccatcacgctcatggctgccgtcatgcttataata
ttctacaagatgcgcaagcagcaccaccagcaggatcatgatgggccgagccgcaccatt
gagatcatcaacgtccacgaggagctggcgagggttccggccatggagagtcacctgact
cttccgcccctggagcataatcattacaaccattataactcctacaaaactacttataac
catgtgtccactctcagctcgctgcatagttcagtgcatgaacctttactaatccaagcc
agctcaaaggataacgtacaggagacgcaaatttga
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