Ctenopharyngodon idella (grass carp): 127516493
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Entry
127516493 CDS
T08802
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04217
Necroptosis
cide04622
RIG-I-like receptor signaling pathway
cide04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
127516493 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127516493 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
127516493 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127516493 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127516493 (si:cabz01101003.1)
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127516493 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C67
127516493 (si:cabz01101003.1)
Ubiquitin system [BR:
cide04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127516493 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
127516493
NCBI-ProteinID:
XP_051757180
LinkDB
All DBs
Position
7:complement(35260760..35273418)
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AA seq
954 aa
AA seq
DB search
MSGDAHHGRRRRHPKMYMFASDYKVQDHLEGTIRLQRGQLCLEQEGGGGGHRAGRGDYLW
VKVIDNGSVVKVDRQVLSEVPSDLAGLLEPVPDLDVRVKLLSRPQILQRFAALALGSEVR
VFWNRSQSELAEAELRFRGPLTRGSSAVYFGVQLKGWAAGRGKSNGNYKGHQLFTCPDAC
GLFLPVSELSLPRSSRGGSSGDHDRHPHQSNQTPNNGVSPVNILSRAAESAVLCSPQPLA
VGQRVCFTQDESIHRGTVQFCGPLPNRTSSAVYVGVLLDQAVGSWDGYYKGTKLCSITSP
EFGALLPLSKVTPESRSERSPLAVTNPKPLPKLPALPNKTALQPPSPTHSREPAQTPSDR
PLIQAAMLVTAKKALQPPSSSVPKAALKPPPLTTPKPALQPPPVPLTKPQAPPTSPATDH
SRSSNGFHNLPSPPIAEQKVEFGRWLEVGSMVEVNDPPLFGVIRWIGQIGGVSEPVAGIE
LDQELSAATDGSYLGERHFRCPSNKGLFVKLRNCRRDSRFPEPELPINQVDRCNSIAFAN
WSSERVEENTPPVSGLDARLTYEGFKKGIQGHLNSCYLDASLFSMFSCCSSFDWLLFWPT
GPANSKSAQDLLRCEIVNPLRRYGYVCASKTMALRKLLKAETADSGFTNEEKDPEEFLNQ
LFLLLRVEPLLKIRSASQKPQECFIYQLFPPSVSASPASPLVSPVSVCASPPLSPIPLSS
PAAALQRVASVQALLESSFMHSGLKLTEAPSCLPLLMPRFGKEFKMFDAILPSLTLDVTD
LLDEALRQCSICQSVAQWECLQCYEDVDITPGQLKQYCSTCNTQVHTHKKRQTHKPTQVR
VPRGSWEGPVYGARQLMDLFAVTCIETSHYVSFVKHGPEPTDWLFFDSMADREGGENGFN
VPQVRACPEVGRYLSLSADEFARLDAASLRDPVRRLLCDAYMCLYHCPELSLYK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgacgcgcatcacggtaggaggcgacgacaccccaaaatgtacatgttcgcg
tccgactataaagtgcaggaccacctggaaggaaccattcgcctgcagcgggggcagctc
tgtctggagcaggagggaggaggaggaggacacagggctgggagaggagactacctgtgg
gtgaaggtgattgataatggatccgtggtgaaggtggaccggcaggtgctcagtgaagtc
ccctcggatctggctggtctgctggagcccgtccctgacctggacgtccgtgtgaagctg
ctgtcccggccgcagatcctgcagaggtttgctgctctagcgctgggctcagaggtgcgg
gtcttctggaaccgcagccaatcagagctcgctgaggcggagcttcgtttccgcggcccc
ttgaccagaggaagctctgccgtttatttcggggttcagctgaaggggtgggcagcaggc
cgcggcaaatctaacggcaactataaagggcatcagttgttcacgtgtccggacgcctgc
ggcctcttcctcccggtcagcgagctctcgctgcctcgatcgtcacgaggcggcagttcc
ggcgaccacgatcgccatccgcaccagtccaaccagacaccaaacaacggcgtcagtccg
gtgaacatcctgtcccgcgcggcagagtccgcggttctctgctctccgcagccgctcgct
gtcggacagagagtctgtttcacccaggacgagtctatccatcggggaaccgtgcagttc
tgcgggcccttgcctaatcggacctcctccgcagtttacgtgggagttttactggatcaa
gcagtgggatcatgggatggatattataaaggcaccaaactgtgctccatcacatcgcct
gagtttggggctttacttcctctttccaaagtaaccccagaaagtagatctgaacggtct
cctctggcagtaaccaatcccaaaccacttcctaaactgccggcgttgcccaataaaacc
gcccttcagcctccgtcgcccacccacagcagagagcccgcgcagacaccctcagaccga
cccctcatccaagcggccatgctagtgacggcgaaaaaagccctccagcccccgtcctcc
tccgtccctaaagccgctctgaaacctcctccgctcaccacgcccaaacctgctctgcaa
cctccccctgtcccgctcaccaaaccccaggccccgcccacgtccccagccactgaccac
tcgcgctcttcaaacggattccacaacctcccctctccaccaatcgcagagcagaaggtg
gagtttggcaggtggttagaggtggggtccatggtggaagtcaatgacccgccccttttc
ggagtgattcgctggattggacagatcggcggcgtctcggagccggtcgctggaattgag
ctggatcaggagttgtccgccgccacggatggcagttacctcggtgagcgtcacttccgc
tgtccttccaacaaagggctgttcgtcaaactgaggaactgcagacgcgactccaggttt
cctgagcctgaactgcccattaatcaggtcgatcgctgcaactctatagcgtttgcgaac
tggagcagtgagcgtgtggaggagaacactcctcctgtgtcgggtctggacgcccggctg
acctacgagggcttcaagaagggcattcagggtcacctgaactcctgctacctggacgcg
tctctcttcagcatgttctcgtgctgcagctcgtttgattggctcttgttctggcccacg
ggacccgccaacagtaaaagcgctcaggatctgctgcgctgtgagatcgtcaatcctcta
cgcaggtacggctacgtgtgcgccagtaaaaccatggctttacgcaaacttctgaaagca
gagacggcagattctggatttaccaacgaggagaaagatccagaggaattcctcaaccag
cttttcctgcttctccgggttgaaccacttctgaagatcaggtctgcgagtcagaagccg
caggagtgtttcatctatcagctctttcctccgtctgtttcggcgtctccagcatctcct
ctcgtctctccggtgtccgtgtgcgcgtctccgcctctctctccgatcccgctctcgtct
ccggccgcggcgctccagcgtgtggcgagtgtccaggcgctgctggagtcctccttcatg
cactcggggctgaagctcacagaggctccgtcatgtctgccgctcctcatgcccagattc
ggcaaagagttcaagatgtttgacgccattctgccctcgctgaccctcgacgtcactgac
ctgctggacgaggctctgcgtcagtgcagtatctgtcagtcggtggcgcagtgggagtgt
cttcagtgttatgaggatgttgacatcacacccggccagttaaagcagtactgcagcacc
tgtaacacacaggttcacacacacaagaagcggcagacgcacaagccgacgcaggtcaga
gtgccgcggggctcatgggaagggccggtttacggggcccggcagctcatggatctgttc
gccgtcacctgcatcgagaccagccactacgtgagcttcgtcaaacacggccccgaaccc
acagactggctcttctttgacagcatggccgacagagagggaggagagaacggctttaac
gtgccgcaggtgcgagcgtgtcccgaggtgggccgttacctgagtctgtccgcggacgag
ttcgctcgactcgacgccgcctcgctccgagatcccgtccgccgcttactgtgtgacgcg
tacatgtgtctgtaccactgtcctgagctcagcctctacaaatga
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