KEGG   Ctenopharyngodon idella (grass carp): 127516631
Entry
127516631         CDS       T08802                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cide03041]
    127516631
Spliceosome [BR:cide03041]
 Complex B
  Other components
   Complex B specific factors
    127516631
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_DCAF4 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_IP5PC_F Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_VPS8 Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_DCAF12 VPS8_N Hira eIF2A DUF7165 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 127516631
NCBI-ProteinID: XP_051757374
LinkDB
Position
1:complement(44825299..44831876)
AA seq 266 aa
MMMDEAVLCLAVSHDSDMIASGAQDGKIQVWRILNGTCLNRLERAHSKAVTCVCFNKDSS
QLLSASFDQIIRLHGLKSGKTLKEFKGHTSHVNEVIFSHDGHHVISASADGTVKVWNMKT
MDCTHTIKTPDIPEGTDITVNNVVLVPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVR
RGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTITGKLERTLTVHEKDVIGITHHPHQNLIA
TYSEDGLLKLWKPKKVDLQELKVGHN
NT seq 801 nt   +upstreamnt  +downstreamnt
atgatgatggatgaggctgtgctgtgcttggcagtaagtcatgactccgacatgatcgcc
tctggagctcaggatggaaagatacaggtttggagaattctgaatggaacatgcctgaat
agattagaacgagcccacagcaaagcagtcacctgtgtctgcttcaacaaggacagcagt
caactattaagtgcctcctttgaccagattatcaggcttcatggtttgaaatcaggaaag
acgctgaaggagtttaaaggccatacgtctcatgtaaatgaggtcatcttctcacatgat
ggccatcatgtcattagtgcatcggcagatggcacggtaaaggtctggaacatgaagaca
atggattgcacccacacaataaaaacccctgacattcctgagggtacagacatcactgtt
aacaatgttgtgcttgtcccaaagactcctgagcactttgtggtgtgtaataggaccaac
acagtggttgttacgaatattcatggccaggtgatgaggagtttctgttcaggcgtaaga
aggggaggagactttgtttgctgcacgttgtctccacgtggagagtggatttattgcgtg
ggagaggactatgtgctgtactgcttcagcaccatcactggcaaactagagagaaccctc
acggtacatgaaaaagacgtgattggcataactcaccacccccatcagaatctcatcgcc
acatacagcgaagatggcctactcaaactctggaagccgaagaaggtggatcttcaggag
ctcaaagttggtcataattaa

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