Ctenopharyngodon idella (grass carp): 127516633
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Entry
127516633 CDS
T08802
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2 isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127516633
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127516633
Transporters [BR:
cide02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127516633
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127516633
NCBI-ProteinID:
XP_051757372
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Position
7:complement(26673234..26691130)
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AA seq
776 aa
AA seq
DB search
MDFSEHGEMLRQPSNSIPPQPSGGAVGATTNNKPENGNPVPQPPPVNERKTFCPSENKPC
EMEANKAYGTFKNAAPGPTFAPVNSAARKDSAGKMDGSTGKATSDFMSNNQSAVRIAAEH
NNTTGDWTSMSQTTIILGTDGNTSVLPGTVTGDDDDDDAGGDENKARGNWSNKLDFILSM
VGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWK
AIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKESLPWATCKNEWNTIECKDKD
MLLLDTCILRDRNITSIKNTTFCLSANAVGNLSKLLNVTMDNKTYVSPSEEYFKYNVLHI
SKGIEYPGDIRWPLAGCLFLAWLIVYASLAKGIKSSGKVVYFTATFPYVVLVILLIRGVT
LPGAGSGILYFITPKWEKLNDSKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDT
LIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIESVADEGPGIAFVVYPEALTRLPLSPF
WAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPKYLRTHKPQFTLICCLSFFVLGFPMIT
ESGMYMLQLVDTYAASYSLVIIAIFELVGISYIYGLQRFCEDIEMMIGFQPNKFWRICWA
FVTPTILTFILALSLYQWKVMTYEDYTYPTWSMVLGWLMVICSVIWIPIMFVIKMYLAPG
TLIERLKLVCSPQPDWGPFLMKHRGERYKNMIDPLGTNSLGLKLPPKDFQLSAQYQ
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggatttttccgaacacggggaaatgttgaggcagccgtcaaacagtattccgccccag
ccgtcggggggagcggttggagctacaactaataacaaaccggagaacggcaacccggtg
ccccaaccgccgcctgtaaacgaacggaaaactttttgtccctcggaaaataaaccgtgc
gaaatggaagccaataaagcatacgggacgtttaaaaacgcagcacctggacccacgttt
gctcccgttaattctgccgcgcgcaaggattccgccggtaaaatggatggttcgaccggt
aaagccacgtcggacttcatgtctaacaatcaaagtgctgtaaggatcgcggcggagcat
aacaacaccaccggtgactggacctccatgagccagaccaccatcatactgggtacagat
ggcaatacatctgttctgcctggcacggtgaccggggatgatgatgatgatgatgcggga
ggagatgagaataaggcccgggggaactggtccaacaaactggattttattctgtccatg
gtgggatatgccgtgggattgggaaatgtgtggagattcccatatcttgctttccagaat
ggtggaggtgcgtttttgataccttacctaatcatgttaggcctcgccggtatccctata
tttttgttggaggtgtcgttgggtcagttcgccagccaaggcccggtgtcagtatggaaa
gcgattccagctctacaaggttgcgggattgccatgttgataatatctgtcttgatagcc
atatactataatattattatgtgctggacattgtactacctgttcgcttcgttgaaggag
tcactgccatgggccacctgtaaaaatgaatggaacaccatcgagtgcaaagacaaagac
atgctgcttttggacacctgtatactaagggacagaaacatcacgtcaatcaagaacact
acattctgtttatctgcaaatgctgtcgggaatttaagtaaactgttaaatgtaacaatg
gacaataaaacctatgtcagccctagtgaggagtatttcaagtataatgtgttgcatatt
tccaagggtattgaatacccaggtgatattcgttggcccttggctggttgccttttcctg
gcttggcttattgtttatgcatctttagctaaagggatcaagtcttcagggaaggtggtg
tatttcactgccacgttcccttacgtggtgttggtcatcctgctgatccgaggggtcact
ctgcctggggccggttctgggatcctttacttcataacacccaaatgggaaaaactcaat
gattccaaggtgtggaaggatgctgctacccagatcttcttctctctgtctgcagcgtgg
ggtggtcttataaccctgtcatcctacaataagttccataacaactgttacagggatact
ctcatcgtgacgtgtactaacagtgccaccagtatttttgctggttttgtcattttttcg
gttattggcttcatggctcatgagctcaaagtccccatcgagagtgtggcagatgaaggc
ccaggaattgcatttgtggtgtatccagaggctctgactaggctgcccttgtcacctttc
tgggccatcatcttcttcctcatgctgcttacgcttggtctggatactatgtttgccacc
atagaaactatagtgacgtctgtttctgatgagttccccaagtacctgcgcacacacaag
cctcagttcactttgatttgctgtttgtccttttttgtgctgggtttccccatgatcact
gagagtggaatgtacatgcttcagctggtggacacatacgcagcctcttactctctggtc
atcattgccatatttgaactggttggaatctcatacatttacggtctacaacggttctgt
gaggacattgagatgatgattgggttccagccaaacaagttttggagaatctgctgggct
tttgtcacaccaaccattctcacatttattttggcacttagtctgtaccagtggaaggta
atgacatatgaggattacacttatccgacctggtcaatggtcctcggctggcttatggtc
atctgttctgttatatggattcccattatgtttgttatcaagatgtacctcgcacctgga
accttaattgagcggctgaagttggtttgctctcctcagcctgactggggtccattcctg
atgaaacaccgcggtgaacgctacaagaacatgatcgacccactgggcaccaactccctt
ggcctcaaacttccccctaaagatttccagctatcagcccaatatcaataa
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