Ctenopharyngodon idella (grass carp): 127516639
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Entry
127516639 CDS
T08802
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
cide03015
mRNA surveillance pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127516639
09122 Translation
03013 Nucleocytoplasmic transport
127516639
03015 mRNA surveillance pathway
127516639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127516639
03041 Spliceosome [BR:
cide03041
]
127516639
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127516639
Spliceosome [BR:
cide03041
]
Complex C
Other components
EJC/TREX
127516639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
127516639
NCBI-ProteinID:
XP_051757382
LinkDB
All DBs
Position
7:1888985..1914091
Genome browser
AA seq
1262 aa
AA seq
DB search
MAELEDVTLDGKPLHSLRVADLKAALEQRGLAKSGQKNALIKRLKGALMLENLQRTSTHH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREATEADERQSPADPEEDDLMS
TKGSTSFLPEKHRIVHSHLSVTQAGGGGLPQDPGLMGSHRLDTGPVPVSQESPDTKAGRI
WHPSFLPGHEEVATPSPPRAVASLSVRVVGQPERQGLPIMMPRSQEREGTAPVEAGLAHS
VLQLSRSAGAAACSQVDSDEDEDDDDDDSEDDDEWGPSSHGKKDVRAPPVHAPPAAAPQR
SRRKLQPPQHIPPQPQPVHQPPLQLRQPTPPPSPPPELSFPLPDTPKQSPHDQDEPAGIA
EDAAPGAGMVSSPSLKRQESSSSSRSSSPEPPSTRRPGPLSLLVRKMESEGVFGAQKEGM
EGEGEMEVEEQEDGEPEAQGSAQQLFGSEVSMSVPAVVPAQQDAQDSELEKEREEEKRSE
EKENEKADETSAPFHLASATTFPPRRKQIFSEVPPPESLKLPSKPEQMSVLTTGPKCSED
IAMETEPSKAMAESKHEEDKEVEVLEKEAPEQSPKPAKESKKALKSPHATGGGEIEKTRK
SSLREKSPGRRSSTSSQTSSSDTDSESSRSSSSPSQEKSSLPSQKKDEKKNRRADVEEEN
KAQSSREVKQEALSEPAGQVAMELEGRSHSESAMHQSDHQGAESSDSHPEESSAAKSFAA
RKISLSSKTEIASSESEPVGGASRKRRWGSSTAVTAKKPSISITTESLKTLIPDIKPLQE
AVVELHPDEGRLSVDEDSSGPREREEPEEDQGLKIRRTVTQIVPSDGHENGQKEMEEEDD
DNEEETKWTGGEKEIHRKQESSPHASIETQEGDSKKVTPNDSLVRRSISQQKSGVSITID
DPIRTGRQLSPPHGKTSKIIHVCNLVRPFTLGQLKELLNRTGMLVEEGFWIDKIKSHCYV
TYCSIEEAAATREALHGVKWPTSNPKVLRVDFCEQDELDFHKGLVSSDRAGVGHDPQASG
TSGRPAAHPPLPPANHEKEKERERERDGGASAVKDQWAERERAMERRERTRSEREWDRDK
VKDFGRDDRNDRTRRSRSRERRRRERGKSKEKRVEKKDKPEEPPVKLLDDLFHKTKAAPC
IYWLPLTDEQATQRALERAERKKEREKRRKELQDEEDKKREEWKERAKGRDREGGNTGGA
GAGVVKRSTEGERDRGKERERERGREAEKRRDSHRGRGSDSKTAGGSRHSQSRSSTSRDR
RH
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggcggaactcgaggatgttacgttagacggcaagccgcttcattcgcttcgtgtggcg
gatttaaaagctgccctggagcaaagagggctcgccaaaagtggacagaaaaatgcactt
attaaaaggctgaaaggggcacttatgttggagaatctccagcgaacatcaacccatcac
attggtcttcagcccaactcgcagattggagaggagatgagtcagaacagctttataaag
cagtacctggcaaaacagcaggagctcctccgacagagactggagagagaagcccgagag
gccaccgaggcagatgagagacagagtcctgctgaccctgaggaggatgacctcatgtca
accaagggtagcacttcctttctgccagagaagcatcgcattgtacactctcatctgtct
gtaacccaggcgggtggaggagggttgccgcaggaccccgggttaatgggatcacacagg
ttggatacaggccctgttcctgtgtctcaagaatcacctgacactaaagctgggaggatc
tggcatccttcgttcctccccggccacgaggaggtagcaacaccctctcctccacgagca
gttgcctccttgtctgtgcgcgtggttggacaaccagagcgtcaaggcctgccaatcatg
atgccccgttcccaagagagagagggaactgcgccagttgaagcaggtcttgcccattca
gtgttgcagctgagccgttctgcaggggctgcagcttgttctcaagttgatagcgatgag
gatgaggatgatgatgatgatgacagtgaagatgatgatgaatggggcccttcctcacat
gggaaaaaggacgtccgtgctcctccggtacatgctccaccagctgcagccccccagcga
tcccgtcgaaagcttcagcccccacaacatatccctccccagcctcaaccagtccaccag
ccgcctctgcaactccgtcagcctactcctcccccatcaccacctccagagctctctttc
ccactacctgacactcccaaacagagcccgcatgaccaagatgagccagccggcatagca
gaagatgctgctccaggggcaggcatggtctcttctccatccctcaaaagacaggagtcc
agctccagttctagatccagcagcccagaaccaccatccacacggagaccaggtcccctt
agcctgctggtccgaaaaatggagtctgagggcgtgtttggtgcacagaaggaagggatg
gagggagaaggagagatggaagttgaagagcaggaggatggtgaaccagaagcgcaaggc
tcagctcagcagcttttcgggtcagaggtgtccatgtcagtacccgcagtggtccctgct
caacaagatgctcaagactccgagttggagaaagagagagaggaagaaaaaagaagtgag
gagaaagaaaatgagaaagcagatgagacctctgcaccattccatttggcatcagccaca
actttcccacctaggagaaaacaaatcttctcagaggtcccaccacctgagtcacttaag
ttaccctccaaacctgagcagatgtcagtcctcaccacagggccgaagtgctctgaagac
attgctatggagacagagccctctaaagcaatggctgaatcaaaacacgaggaggacaaa
gaagtggaggttctagagaaagaggcacctgaacagtcacctaaaccagcaaaagaaagt
aaaaaagccctaaaatcaccacacgctactggaggaggtgaaatagaaaaaacaagaaaa
agttcactgagagaaaaatctcctggacgacgctcatcaacgtcaagtcagacatcatca
tctgacacagattcagaatcctctcgttcttcaagctctccttcccaggaaaaatccagc
ctacccagccaaaagaaggatgagaaaaagaacagaagagcagatgttgaagaagaaaat
aaggctcagtcttccagggaggtaaagcaggaagctctctctgagcctgcaggccaagtt
gctatggagctggagggccgctcgcattcagagagtgctatgcatcagtctgaccaccag
ggggcagaatcaagtgactcccatcccgaggagagctccgctgcaaaatcgtttgctgcc
cgaaagatctccctgagcagtaaaacagagattgcatcatctgagtcagagcctgtgggc
ggagcaagcaggaagagaaggtgggggtctagtacagcagtcactgccaagaagccttca
atcagcatcaccactgaatcattgaagacactgattccagacatcaagcccctacaggag
gcggtggtcgaactgcacccagatgaggggcgtctctctgtggatgaggactcatccggg
cctcgcgagcgagaggaaccagaggaggatcagggactcaagatcaggcgcacagtgaca
cagattgttccatctgatggacatgagaatgggcagaaagaaatggaggaggaggatgat
gataatgaagaagagacgaaatggacaggaggagagaaggaaatacataggaaacaggag
agctcccctcatgctagcatagaaacacaggaaggtgattccaagaaagtcactcccaat
gattctttggtgcggcggtccatcagtcaacagaaatcaggtgtgtccataactattgac
gacccaataaggacgggtcgccagctgtctcctcctcatggaaaaacctccaaaatcata
cacgtatgcaacctggtgcgacctttcaccttagggcagctgaaggagttgttaaatcgg
actggtatgttggtggaggagggtttctggattgacaagatcaaatctcactgctatgtc
acatactgctctatagaggaagcagcagccactcgagaagcactgcatggtgtgaaatgg
cctacgagtaatcccaaagtactacgggtggatttttgcgagcaggatgagttggacttc
cataaaggtcttgtgtccagtgaccgtgcaggtgtaggtcatgaccctcaagcctcagga
acctcaggccgccctgccgcacatcctccactcccacctgcaaatcacgaaaaagagaag
gaacgagaaagggagcgagacggaggggcttcagctgtgaaagaccagtgggccgagaga
gaaagagccatggagagaagagagaggactcgttctgagcgggagtgggaccgggataaa
gtgaaggatttcgggagggatgaccgaaatgacagaacaagacggtcacgatcgcgggaa
cgaagacgcagagagagaggcaagagcaaagagaagagagtggaaaagaaagacaaacca
gaagagcctcctgtaaaacttcttgatgacctgttccacaaaactaaagcagctccctgt
atatactggttacccctcacagacgaacaggcaacacagcgagctctggagcgtgccgag
cgcaaaaaggagcgagagaagaggaggaaggaactccaggatgaagaggacaaaaaacgg
gaagaatggaaggagagagcaaaaggccgtgacagagagggagggaacacaggaggagca
ggggcaggtgttgtaaaacgttcaactgagggagagcgagacagaggcaaggaaagagag
agagaaaggggcagagaggcagaaaagaggagagacagccacagaggccgtggtagcgac
tccaaaactgcagggggaagcagacactcacagagccgtagcagcacctccagagacaga
cgccactga
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integrated database retrieval system
