Ctenopharyngodon idella (grass carp): 127516664
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Entry
127516664 CDS
T08802
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127516664
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127516664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127516664
NCBI-ProteinID:
XP_051757431
LinkDB
All DBs
Position
7:complement(3826303..3829657)
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AA seq
293 aa
AA seq
DB search
MMYSMMEHELKTAGQPHPHQNSPGMSPPVSVLGNAHHGSKTSCPPGGDPMDKVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVHMKEYPDY
KYKPRRKTKALMKKDNPVGKYPLAHGNLLASAVAQGQGGSPRMDGYGWGHTGGYMGMQGE
ALGYPQQLHRYELSALQYPPAQTYMNSASSYSQMSYSGSPQQPSPVMSMVKPEPLSHSPT
GVPNHHRGAFQGDLRDMISMYIPGGDTSDSSNQRAYPSVQQHYLGGTVPLTHI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatgtatagcatgatggagcatgaactgaagaccgcgggtcaacctcacccccaccag
aacagtccagggatgtctcctccggtcagcgtgcttggaaatgcgcaccacggatcaaaa
acttcttgtccacccggcggggaccctatggacaaagtgaagcgccccatgaatgcgttt
atggtgtggtctcggggtcagcggaggaagatggcacaggagaaccccaaaatgcacaac
tccgagataagcaaacgcctcggagcggaatggaaacttttaacggacgtggagaagcgg
ccgttcatcgatgaggccaaacggttgcgggcagtacacatgaaggaataccccgattac
aaatacaagcctcggcgtaagaccaaagctctcatgaagaaggacaatcccgtcggtaaa
tatcctctcgcacacggcaaccttttggcatcggccgtggcacagggacaaggtggcagc
ccgagaatggacggctatggctggggtcacaccggtggttatatgggcatgcagggtgag
gcactcggatacccgcagcaactgcaccgctacgaattgtcagctctccagtacccgccg
gcacagacgtacatgaacagcgccagctcttacagccaaatgtcatatagcggcagccct
cagcagcccagtccagtgatgtctatggttaaaccagaacccctctcccattcacctact
ggagtaccaaaccaccaccgtggcgctttccaaggggacctgagggacatgattagcatg
tacattccaggtggtgataccagcgatagctctaaccagagagcctatcctagtgtccaa
cagcactatctaggtggaactgttcccctcactcatatctga
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integrated database retrieval system
