Ctenopharyngodon idella (grass carp): 127516702
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Entry
127516702 CDS
T08802
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127516702
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127516702
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127516702
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C46: hedgehog family
127516702
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Morphogens
127516702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
DHQS
DUF7764
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
127516702
NCBI-ProteinID:
XP_051757492
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Position
7:13593211..13601857
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AA seq
418 aa
AA seq
DB search
MRLMTRVLLVSLLSLSLVVSGLACGPGRGYGTRRHRKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELIPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSALVTLKDGGQKAVKDLNPGDKVLAADSAGNLVYSDFIM
FTDRDSATRRIFYVIETKEPVEKITLTAAHLLFVLDNSTDDLHTMTAAFASSVRAGQKVM
VVDDSGQLKSVIVERIYTEEHQGSFAPVTAHGTIVVDRILASCYAVIEDQGLAHLAFAPV
RLYYDVSSVLFPKNFISQSSATLQQEGVHWYSKLLYQMGTWLLDSHMLHPLGMSVNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttatgacgagagtgctgctggtgtctcttctcagtctgtccttggtggtgtcc
ggactggcctgcggtccaggcagaggctacggcacaagaagacatcggaagaagctgaca
cctctcgcctacaagcagttcatacctaatgtcgcggagaagaccttaggggccagcggt
agatacgagggcaagataacgcgcaattcggagagatttaaagaacttattccaaattac
aatcccgacattatctttaaggatgaggagaacacaggcgcggacagactcatgacacag
agatgcaaagacaagctgaactcattggccatctctgtaatgaaccagtggccgggggtt
aagttgcgtgtgacagagggctgggatgaggacggtcaccattttgaagaatcactccac
tacgagggaagagctgttgatatcaccacctctgatcgagacaagagtaaatatgggaca
ctctctcggttagctgtagaagctggatttgactgggtctattatgagtccaaagcccac
atccattgctctgtcaaagcagaaaattcggttgctgcaaaatctggagggtgtttccca
ggttcggctctggtcacgctcaaagacggagggcaaaaggccgtgaaggacctgaacccc
ggcgacaaggtgctggcggcggacagcgccgggaacctcgtgtacagcgacttcatcatg
ttcacagaccgagactccgcgacgcgacgtatcttttacgtcatagaaacgaaagaaccc
gttgaaaagatcaccctcaccgctgctcatctcctttttgtcctcgacaactcaacggat
gatctccacaccatgaccgccgcgtttgccagcagtgtcagggccggacaaaaggtgatg
gttgttgatgatagcggtcaacttaaatctgtcatcgtggaacggatatacacggaggag
caccagggctcgttcgcaccagtgactgctcatggaaccattgtggtcgacagaatactg
gcgtcctgttacgccgtaatagaggaccaaggtctcgcgcatttggccttcgcgcccgtc
aggctctattatgacgtgtcatcagtcctgttccccaaaaacttcatcagtcagtccagt
gcgactttacaacaggagggagtccactggtactccaagctcctctatcaaatgggaacg
tggcttttggacagccacatgcttcatcctttggggatgtcagtaaactcaagctga
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