Ctenopharyngodon idella (grass carp): 127516712
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Entry
127516712 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate synthase 1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cide01100
Metabolic pathways
Module
cide_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
127516712
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cide01003
]
127516712
Enzymes [BR:
cide01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
127516712
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
127516712
Glycosyltransferases [BR:
cide01003
]
Glycan extension
O-Glycan
127516712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
127516712
NCBI-ProteinID:
XP_051757510
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Position
7:30467030..30543724
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AA seq
799 aa
AA seq
DB search
MAGRSRRSWFSVLLGLVVGFTLASRLILPRATELKKAGHKRRASGGTGGCGGGGGMMMMK
KEYGGVLMPSTEKPVVPQSNSFLFVGVMTAQKYLNNRAVAAYRTWAKTIPGKVEFFSSEG
SDTTIPIPIVALQNVDDSYPPQKKSFMMLKYMHDHYLDQFEWFMRADDDVYIKSEKLESF
LRSLNSSEAIFLGQTGMGARDELGKLALEPGENFCMGGPGVIMSREVLRRMVPHIRQCLQ
EMYTTHEDVEVGRCVRRFAGVQCVWSYEMQQLFYENYEPNKKGYIRDLHNSKIHRAITLH
PNKNPPYQYRLHSYMLSRKIAELRHRTIQLHREIVQMSRYSNTEVHKEDLQLGMPPSFMR
FHPHLREEVLEWEFLTGKYIFSSSDGQPPRRGIDSSQKMALDDIIMQVMEMINANAKTRG
RVIDFKEIQYGYRRVNPMYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSKIQFLE
DEEMDARVLAARINQDSDSLSFLSNSLKMLVPFKLSGPGVEQHEPKEKKINILVPLAGRY
EIFVRFMANFEKICLIPNQNVKLLILLFSTDNNTERIKQIELMREYHMKYPKADMEIKPV
SGPFSRALALEVGSAHFTNDSLLFYCDVDLLFTPDFLTRCRGNTILGEQTYFPIIFSQYD
PKVVYAGKVPSDNHYVFTSKTGLWRHYGFGIVCVYKGDLVKAGGFDVSIQGWGLEDVDLF
NKFVQSGIKLFRSTDTGIVHVHHPVVCDPNLDPKQYKMCLGSKASSHGSTQQLAELWLEK
NNHSFRKISNSNNESMRTE
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagaagtcgcagatcgtggttcagtgtgttgctgggtctggtagttgggttc
acactggcgtccaggctcatcctgccccgggccactgagctgaagaaagcgggtcacaag
cggcgggcgagcggtggcacgggcggctgcggaggtggaggagggatgatgatgatgaag
aaggagtatggaggggtgctgatgcccagcacggagaagcccgtggtgccccagtccaac
agtttcctgttcgtgggcgtcatgaccgcgcagaagtacctgaacaaccgcgccgtggca
gcatataggacctgggccaagaccattccaggcaaagtggagtttttctccagcgagggt
tctgacacgacgatcccaattcccattgtggctctgcagaacgtggacgactcgtaccct
ccgcagaagaagtccttcatgatgctcaagtacatgcatgaccactacctggaccagttt
gagtggttcatgcgagccgacgatgacgtctacatcaaaagcgagaagctggagagcttt
ctgaggagtctcaacagcagcgaggccatctttcttggccagacgggcatgggcgcccgt
gacgaactgggcaagctggccttggaaccaggggagaacttctgcatgggcggccctggc
gtcatcatgagccgtgaggtgctgcgcaggatggtgccccacatccgccagtgcctgcag
gagatgtacaccacccatgaggacgtggaggtgggccgctgcgtgcgccgcttcgccggg
gtgcagtgcgtctggtcctatgagatgcagcagctgttctatgagaactacgagccaaac
aagaagggctacatccgtgatctccacaacagcaagatccaccgggccataacccttcac
cccaacaagaaccctccataccagtatcgcctgcacagttacatgttgagccgaaagatc
gctgagctgcgccaccgcaccatccagcttcaccgtgagattgtgcagatgagccgctac
agcaacactgaggtgcacaaggaagacctccaactgggcatgcctccttcgttcatgcgc
tttcatccccacctacgtgaggaggtactagaatgggagttcctcacaggcaagtacatt
ttctcgtcctcggacggtcagcctccacgtcgaggcattgactcctcacagaagatggcg
ctggacgacatcatcatgcaggtaatggagatgattaacgccaatgccaagacgcgaggt
agagtcatcgacttcaaagagatccagtacggataccgaagggtcaaccccatgtacggg
gcggagtacgtactggatttgctgctgctctacaaaaagcacaaggggaagactatgaca
gtgcccgtaaggaggcacgcttatcttcagcagacattcagcaagatccaattcctggaa
gatgaggaaatggacgcccgagtgctggctgccaggatcaaccaggactcagactcgctg
tccttcttgtccaactctctcaagatgcttgtcccattcaagctgagcggcccaggcgtc
gaacagcacgaacccaaagagaagaagatcaacatccttgtgccgctggcgggacgctac
gaaatctttgtgcgcttcatggccaacttcgagaagatctgcctcattcccaatcagaac
gtcaagttgctgattctgcttttcagcacggacaacaacacggagcgcattaagcagatc
gagctcatgagggagtatcacatgaagtatccaaaagccgatatggagatcaagccggtt
tctggccctttctcccgtgctctggccctggaggtcggctcggcccactttaccaatgat
tccttactcttctactgtgacgtggacttactgtttactccggacttcttgaccagatgt
cgcgggaacaccatacttggggaacagacgtactttcccatcatctttagccagtacgac
ccaaaggttgtctacgcgggcaaggtgcccagtgacaaccactatgtgttcacatccaaa
acgggcttgtggagacactacggttttgggatcgtctgtgtctacaaaggagacttggtc
aaagcgggtggctttgatgtctcaatccaaggttggggactggaggatgtggacctcttt
aacaaattcgtccagtccgggatcaagctgttccgcagcacagacactggcatcgtgcac
gtccaccaccccgtggtttgcgaccccaacctagatcccaagcagtacaaaatgtgcctg
ggttccaaagcatcctcgcatggctccacgcagcaacttgccgagctgtggttggagaag
aacaaccatagcttccgaaagatctcgaactctaataacgaatcaatgaggacagaatag
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