Ctenopharyngodon idella (grass carp): 127516735
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Entry
127516735 CDS
T08802
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127516735
Membrane trafficking [BR:
cide04131
]
Protein recycling
Others
Others
127516735
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
127516735
NCBI-ProteinID:
XP_051757556
LinkDB
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Position
1:36066402..36266931
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AA seq
1244 aa
AA seq
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MERGIRYCRVNVSAFCTLLLVLFASVPVTETVITCRSCHLLDKWSGRELLVRMDSGVDSG
KVSGKNGDGSTALFNSAGAETAQPDYGATDNGEHAHSVRKRNTERLRSEKMPPDDKWKSV
RSNGKVHHLKRAGSQGSSSTPGDPHHRVRRSTQGPSSSPGARSPPAFGNSTARAARRVPR
SELRWNREERRTATSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFN
LGSVTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVESSLLIS
SDEGATYQKYRLNFYILSLLFHPEQEDWILAYGHDQKLYSSVEFGRRWQLVHERVAPNRF
YWSKLGLDKEPGLIHLETSISETQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYV
FVQVSTGGRPIYYVSSRRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNL
YVSEAGGIYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANKKLNNEVKTYITYNKG
RDWRLLQAPSADLRGNQIHCILPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIG
AELTSSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGR
VWNKYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIESDY
VPWDLHDQGERCLMGVKRVYRKLKAIARCVMGKTYSVTMISEPCDCTESDFECDYGFERR
TDGKCTPAFWFPPSSMSRTCTTEHTFLNSTGYRKVVSNNCTGGVMEQYTARRQLCPSQAP
RGLHLVTSEGKLTASLASNVTFLVFLEEGDGSKTSITVDFGDGNAFTYSNVSSIEDGIKH
IYKNVGIYRVSATAENSLGSETVLLFLHITCQLESVHLSAPFVAVKNKEVNLTVVLWPSQ
VGTVTYIWWFGNNSEPVITLEGSVAFTFSREGISIVTVQVSAGNNILQDRKTIAVHEYFR
SHLLAFSSNLDDHNPDVAEWRLDVSRVIKASMVQATGVSPEQLLVTVLPGLPTAAEFFLL
PDKQLTEGKPDKTATHLDQLSELVLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSE
NHSGSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHIYAAMQDEKEQEMIQSPVSPTDSTPS
CSSQRELLTPLEPLDTEPNTQTIECIKPHPRVKFSSDLPTYIDV
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggagagagggatcagatattgccgggttaatgtcagtgctttctgcaccctgcttttg
gttttgttcgcttcggttcctgtgaccgaaacagtgataacttgcaggtcatgtcacctg
ctggataagtggagcggtcgggaattactggtgaggatggacagtggtgtcgactctggt
aaagttagtggaaaaaatggagacgggtcaacggcgctgtttaattcggctggtgctgaa
actgctcagcccgactacggcgcaaccgacaacggcgaacacgctcactctgtgcgtaaa
cggaatacagagaggcttcgctcagagaaaatgccacccgatgataaatggaagtcggtg
cgcagtaatggcaaagttcatcatctcaaacgggcaggttcacaaggttcaagttcaacc
cctggagatccccatcaccgagtgcgtagaagcacccagggacccagctcgtccccaggt
gcgcgctcgccaccggcttttggcaacagcaccgcgcgggctgcgcgcagagtcccccgc
tctgagctgaggtggaacagggaagagcggagaacggccacatcacgacaggaggagctg
aaacttaccagctctacctttgcactgacaggggattccgctcacaaccaagctatggtg
cactggtccggccaaaacagcagcgtgatcctcatgctgaccaaactgtacgacttcaat
ctgggcagtgtcacagaaagttctttatggaggtcaacagattacggaaccacttacgag
aaactcaatgaaaaggtgggcgtgaagaccatcctcagctatctgtacgtcagccccaac
aacaagcgcaagatcatgttgctgacagatccagaggtggaaagcagtttgctcatcagc
tcagatgaaggcgccacctatcaaaaataccgtctcaacttctacatcctcagcctgttg
tttcatcctgagcaggaggactggatccttgcttatggccatgaccagaagctctacagc
tctgttgagtttggccgtcgatggcagcttgttcacgagcgggtggcgcccaatcgattc
tactggtctaaactgggccttgataaagagccgggcctgattcaccttgagaccagcatc
tcagaaacccaggctttgtatgtcacatgtaagcttcagaactgcacagatgccaacaag
ggcaaaccttttcctggatacattgaccccaactccctggtggtccaagatgagtatgtg
tttgttcaggtgtcaaccggtggtcggccaatctactatgtgtcatccaggcgagatgtg
tttacacccatgaagcttcccaaatacacccttccaaaggatctgcatgtgatcagtaca
gatgagaaccgggtcgtggcggcggttcaagagtggaaccagaatgacacttacaacctg
tatgtgtcagaggccggaggcatttactacacactggctttggagaacgtcatgagcagt
atgggtccagagggaaatgtcatgatagatttatatgaggtggcagggataaaaggcatg
ttcctggccaataagaagctaaataatgaggtgaagacatatataacctataacaaaggc
cgagactggaggctcctgcaggctccctcagctgatctcagagggaaccaaatccattgc
atactgccatactgttcgcttcatcttcacctgcacgtgtcagcaaacccgtacacatct
ggaaatatagccagcagagagtcggctccaggaatcatagtggcgtcaggttcaataggc
gcagagttaacgagcagcaacgttagcatgttcatcacatccgacgctggaaacacgtgg
cggcagatatttgatgaagagtacagtgttctgtatctggaccaaggcggagctttagta
gctattagacatactcctcttcccatcaggcacctctggttgagctttgatgaggggaga
gtgtggaacaaatatagtttcacttcatcacccctgtttgtggacggggtcttgggtgaa
ccaggcgaggagacgctcattatgacgatcttcggtcatgtcagtcaccgctcagaatgg
cagctggtaaagatagacttcaggtctatctttaacagaagatgcatagagtctgactat
gtgccatgggatttacatgaccagggtgaacgctgcctcatgggagtcaaaagagtctat
cgaaagctgaaggccatagcaaggtgtgttatgggtaaaacctactctgtcacgatgatt
tccgagccgtgtgactgcactgagtcagactttgaatgtgattatggtttcgagagaagg
actgatgggaaatgtactccagcattctggttccccccctcctctatgtctcggacctgt
actacagaacacacgttcctcaacagcactgggtacagaaaggtggtgtctaacaactgc
actggtggggtgatggagcagtacacagctcgtaggcagctgtgccctagccaggcccct
cgcggcctccacttagtgaccagcgaagggaagctaacggcatctctggccagcaacgtc
accttcctcgtgttcctggaggagggtgatggatcgaaaaccagcatcacggtggatttc
ggtgacggaaacgccttcacctactccaacgtgagctctatcgaagatggcattaaacac
atctacaagaacgtgggaatctaccgagtgtcagccacggcggagaacagtctgggctct
gaaactgtgctcctcttcctacacattacgtgtcagctggagtctgttcatctctccgcc
ccatttgtcgctgtgaaaaacaaagaagtcaatctcacagtggttctctggccaagccaa
gtgggaacagtcacctatatctggtggtttgggaacaattcagagcccgtgatcacgctg
gaggggagtgtggcgttcacattctctcgagagggaatcagcattgtcactgtacaggtg
tccgctgggaataacatcctgcaagacaggaaaaccatcgctgtccatgaatacttcaga
tctcatcttcttgcattttcatcgaatctggatgatcacaaccctgatgtggctgaatgg
agacttgatgtgagccgagtcattaaagcctctatggtgcaggcgacaggagtgagtcct
gaacagctgttggtcactgtgttgcctggactgccaacagcagctgagttcttcctatta
ccagacaaacaactaacagaagggaagccagacaaaacagctactcatttagaccagctc
tcagaactggttctcagtgctctgaatcagaatctggttcagttcacactcagaccagga
gtccaggtcacagtatacgctgcccatttatcagcagcgcctctagtggatacaagtgag
aatcacagtggctcagctatgcttatgctcctctctgtggtggtggtgggtttagcagtg
ttcctcatctataaattcaaaaggaagatcccaggcctccacatctatgcagcgatgcag
gacgaaaaagagcaagaaatgatccagagtccagtttctcccactgacagcacacccagc
tgcagctctcagagagagctgctcacaccactggaacctctggacacagagcccaacacc
cagaccatcgaatgcatcaaacctcatccacgtgtcaaattctcatcagatcttcctaca
tacatcgacgtttga
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