Ctenopharyngodon idella (grass carp): 127516839
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Entry
127516839 CDS
T08802
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1A isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04137
Mitophagy - animal
cide04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127516839
04137 Mitophagy - animal
127516839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127516839
03029 Mitochondrial biogenesis [BR:
cide03029
]
127516839
Membrane trafficking [BR:
cide04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
127516839
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
127516839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
eIF2A
Motif
Other DBs
NCBI-GeneID:
127516839
NCBI-ProteinID:
XP_051757746
LinkDB
All DBs
Position
7:complement(12501436..12583821)
Genome browser
AA seq
1377 aa
AA seq
DB search
MKVGQKNSVCILSSRERGARGLASHRILQQLVEEKTQRMKWQSQKVELPDSPRSTFLLAF
SPDRSLMASTHVNHNIYITEVKTGRCVHSLVGHRRTPWCLTFHPSIPGLIASGCLDGEVR
IWDLHGGSESWLTETNSAIASLAFHPTAQLLLIATNNELHLWDWSRKEPFTVVKTASETE
RVRLVRFDPLGHYLLTAIVNPSNQQNDDDPEIPMDSVEMPHLRQRSFLQSQPVRRTPILH
NFLHILTSRNSVSQTGGTPAASTDEASDSSGRYAVLRDRSRLPYHGCVQPLGVVCFCSRC
SSTQVPSPPDEDSSDSASLEGQSNASTFSSARTEPRIPRFPVESRVVYRPSAFSSVYGGG
SNMRNLSSSSGRRGVAGMAPIPPFRQHPLGREGGGRFPGADWTGSVLNGRGSSMTPPRTS
ASSVSLLSVLQQQGTSSQSPVYTTASDGWGFPHSSGSSSGTSSSRHRPPQEEGHNSPSSI
RNVLQCNLNRYFMEYEQMQDLVQPLEGSRQDQQTQEMINNNMDPEQPGPSHYQPLYNSEN
HSHSHMNRCRVCHNLFTYNRGTQRWERTGQPTSAERNSAWQPTSPAFHNVAPVSHSDHHL
LVRTPMEPSPDATEPHVHFSRSTATNQHEDQAVGLVFNQETGQLERVYRQSATSHSANVS
QEALNQEMPDDTQDDDYLRRRLLESSMMSLSRYDVSGSRDHPIYPDPARLSPAAYYAQRM
IQYLSRRDSIRQRSLRPPSRPRPLSSNSNSLSPGPAPSVENSEVDFEEFEESGSRHRAPR
NARMSAPSLGRFVPRRFLLPEFLPYSGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVA
SNIANTTYRLQWWDFTKFDLPEISNASVNVLVPNCKIYNDASCDISADGQLLAVFIPSSQ
RGFPDEGILAVYSLAPQNLGEMLYSKRFGPNAISVSLSPMGRYVMVGLASRRILLHQITD
HMVAQVFRLQQPHGGETSMRRVFDVVYPMAPDQRRHVSINSARWLPEPGLGLAYGTNKGD
LVICRPVDVHSDGNGTSEHSERMFTINNGGGVGTSSSRGGDRAGNSRTDWRSHREMGLMN
AIGLQPRHPAPTVTSQGTQTQTLQLQNAETQTDHDLPDNPEQPSTSQGSQVTDGQTSLLS
SASDSLDLETLPEDSGSEVVPETPPHSRPQEDEGSDLTEPSTDSTGQAEYVSRIRRLIAE
GGMTAVVQREQSTTMASMGSFGNSIIVSHHIHRGSQTGADAQSRTHLSPIPGPSSSAPET
LAGAAGSYTCILTNALGLHTDTVQGTSTDIDLTPDVEQERFHTSLLSQEFSPLFSSAVNI
NGPSASMETDNVLEGEELQDYESLPPSLLSSSPSLSPVNNSNYNNSDSSYHGEEYGR
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgggacagaagaactcagtgtgtatcctgtccagtcgagagcgaggagcacga
ggtcttgcctcacacaggatcctacagcaacttgtagaggagaagacacagcgcatgaaa
tggcaaagccagaaagtggagttaccagacagcccccgctcgacctttcttctggccttc
agtccagataggtccttaatggcctctacccatgtgaaccacaacatctacatcacagag
gttaagacaggaaggtgtgttcactctctggtgggccaccgccggacaccctggtgcttg
acctttcaccctagcatacctggccttattgcttctggctgcctggacggagaggtccga
atctgggacctgcatggaggcagtgagagctggctcacagagactaactcagcgatcgca
tcccttgctttccatcccacggctcagctgttgctcattgccaccaacaacgagctgcac
ctatgggactggagtcggaaggagcccttcactgtggtgaagactgctagcgagacagag
agagtcaggttggtgagatttgatccattgggtcactatcttctaaccgccattgtaaac
ccttcaaaccaacagaatgatgatgatcctgagattccaatggacagtgtggagatgcct
catctccgtcagcgctccttcctgcagtcccagcctgtaagacgcacacccatcttgcac
aatttcttgcacatccttacttcccgcaactcagtctctcagactggaggtactcctgct
gcttccactgatgaggcctccgattcgtctgggcgttacgctgttttgagggatcgttcc
cggctgccataccatggttgcgttcagccactcggagtggtatgtttctgtagccgttgc
tcatcaacgcaggttccgtctccgcctgatgaggactcttcagactccgcctccctggag
ggacaatcaaacgcatccaccttttcttctgcacgcacagagccgcgaataccgcggttt
cctgttgaatctcgtgttgtatatcggccctcagcatttagcagcgtgtacggtggcggg
agcaacatgcggaacctttcttctagctctggaaggaggggagtggctggaatggcgcca
atcccacctttccggcagcacccgctaggcagggaaggtggaggccgtttccctggggca
gactggacaggcagtgtgcttaatggaagaggtagtagtatgactccacccagaaccagt
gcttcctctgtcagcctgctttctgtcctgcaacagcaagggacttccagccaatcacct
gtttacaccactgctagtgatggatggggctttcctcatagcagtggcagctcatcaggg
actagttctagcaggcaccgcccaccgcaggaagaggggcacaacagcccttcttccatc
cgcaatgttctgcagtgtaaccttaaccgctatttcatggagtatgagcaaatgcaggac
ctagtgcagccactagagggcagcaggcaggaccagcagactcaggaaatgataaataac
aacatggacccagaacaaccgggcccatctcattaccagccactctacaacagcgaaaac
cattcccacagtcacatgaatcgctgtagagtctgccacaacctcttcacctataatcgg
ggtactcagcgctgggagagaacaggtcagccgacatctgctgagagaaactcagcttgg
caacctactagtcctgccttccacaacgtagccccagtctctcattctgatcatcaccta
cttgtacgcacacctatggagcccagcccagacgccacagagcctcacgtacacttttcc
cgcagcacagctaccaatcagcatgaggatcaggctgtcgggctggtcttcaaccaggaa
actggccaactagagcgtgtttacagacaatctgcaacctctcattcagcaaacgtatca
caagaagccttaaaccaggaaatgcctgacgacacacaagacgatgattacctacgcagg
aggctgctggagtcatccatgatgtctctttccagatatgacgtctctggatcacgagac
caccccatctaccccgacccggccaggttgtcccctgcagcatattatgcacaacgtatg
atccagtatttgtctcggcgtgacagcattcggcagcgctctctccgtccccccagcaga
cctcgacccctctcctctaattccaacagcctctcccctggccccgcccccagtgtggag
aacagcgaagttgattttgaggagtttgaggaaagtggaagcagacatagggctcctcgt
aatgcacgcatgtctgccccctcccttggtcgctttgtacccaggcgcttcctcctgccg
gagtttttgccgtattctggaatcttccatgagcgagggcagccaggcctggcaacacac
tcatccgtcaatagggtcctcgcaggtgctgtaattggagacggtcaatctgcagtagcc
agcaacattgctaacacaacctatcgtctacagtggtgggacttcaccaaattcgacttg
cccgagatcagtaatgcttctgttaacgtattggtgcccaactgtaagatctacaatgac
gcgagctgtgatatctcagcggacgggcagttgctggctgtattcattcccagcagtcag
aggggtttccctgatgagggcattttggctgtgtactccctcgccccgcaaaacctggga
gagatgctctactccaagagatttggtccaaatgccatctctgtcagtttgtctccgatg
ggtcgttacgtgatggtgggtctggcgtctcgtcgcatcctgctgcatcagatcaccgat
cacatggtggcacaggtcttcagactgcagcagccccacggaggagagacatccatgagg
agggtgtttgatgtggtgtatccaatggccccagaccagcggagacatgtcagtataaat
tctgcacgttggctgccagaaccagggcttgggctcgcttatggaaccaacaaaggagat
ctggtcatctgcagacctgttgatgtacattcagatggcaacggcacttctgaacactct
gagagaatgttcaccatcaataatggtggaggggttggaaccagcagcagcaggggtgga
gacagggcagggaacagcaggactgactggcgctcacacagagagatgggcctgatgaat
gcgattggtctgcagccacgacatcctgcccccactgttacatcacaggggacgcagaca
cagactttacagctacagaatgcggagacacaaacagaccatgaccttccagataaccct
gagcagcccagcacttctcaggggtcacaggttactgatggtcagacatcattactgagc
tcagcctcagactctctggatttagagactctcccagaggattctgggtctgaggtggta
ccagagacgcccccccacagtcgacctcaggaagatgaagggtcagatctcactgaaccc
agcacagacagcacaggtcaggcagagtatgtttctcgtatccgaaggctaatagctgag
ggaggcatgactgcggttgtccagcgtgagcagagcaccacaatggcttccatgggcagc
tttggcaacagcatcattgtcagccaccatattcaccgtggctcccagacaggagcggac
gcacaaagccgtactcatttgagtcctattcctggtccctcctctagtgcccctgagact
ttggctggagctgcaggttcgtacacctgcatcctaaccaacgcactgggccttcatacc
gacacagttcagggcacctctacagacatagacctaacacccgacgtagaacaggagaga
tttcacacatccctgctttcccaggagttttcacctcttttctcatctgctgtaaacata
aacggaccttctgcttccatggaaacagacaatgtcttggagggggaggagctccaagac
tatgagtcactccctccatctttactctcatcctcaccatctctttctccagtgaataac
agtaactacaacaacagtgatagtagttaccatggagaagagtatgggcgttga
DBGET
integrated database retrieval system
