Ctenopharyngodon idella (grass carp): 127516842
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Entry
127516842 CDS
T08802
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127516842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127516842
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127516842
Membrane trafficking [BR:
cide04131
]
Endocytosis
Macropinocytosis
Sorting nexins
127516842
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127516842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
4HB_MCP_1
FAM92
Tiam_CC_Ex
Motif
Other DBs
NCBI-GeneID:
127516842
NCBI-ProteinID:
XP_051757751
LinkDB
All DBs
Position
7:complement(12593638..12602598)
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AA seq
525 aa
AA seq
DB search
MSSSCGRNPPPFPDNEDQEAELDSRALDSDEYDDEGEDIFTGARSKPITPTSPPDEGDIF
SEEGSYIRTDVHHATNGLHSDEELDLFTEATVELTLTNTTSQGRREIIGPTASACNTTHV
PNSILKPSIVAKTMEELEEEESGDQFELNIAVTNPEKIGDGMNAYMSYKVSTQTTLPMFH
NKTFTVRRRFSDFLGLYEKMLAKHSLLGCIIPPPPQKSVVGMTKVKVGKEDSSSAEFVEK
RRAALERYLQRVVAHPSLLQDPDVREFLERDELPRAVNTQTLSGPGLLKMINRASDAVNK
MTIKMNESDNWFESKLQEVENEEQLLRRLHAAVDSLVNHRKELCSNTAVFSKSVAMLGSV
EENSALSRALSQLAEVEDKMEQLHQQQAFSDFFILAELLADYVRLLGAVRCCFEQRMKVW
QRLQEAQSTLQKKREAEAKLLWANKPEKLQQAKDDINEWESKVSQYERDLERVTCTVRKE
VLRFEKEKARDFKQHVVKYLESLLHTQHRLVKCWEAFLPEAKAIA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagttgcgggcggaatcctcctcctttccctgataatgaagatcaggaggct
gaattagacagtcgtgcgctggacagcgacgagtatgatgatgaaggcgaggacatattc
accggcgcgagaagtaaaccgatcacaccgacatcacctcctgatgagggcgatatcttc
agtgaggagggctcttacatcaggaccgatgtccatcacgccactaatggccttcactct
gatgaagagctggatctgttcactgaggccactgtcgagctgacactcaccaacaccact
agtcaaggcaggagagagattattggtccgaccgcatcggcttgcaacaccacacatgtc
cctaattccatactcaaacccagcattgtcgccaagaccatggaggagttggaggaggaa
gagagtggagaccagtttgagctgaacattgcagtcacaaaccctgagaaaattggagat
ggcatgaatgcctatatgtcgtacaaagtttcgactcagacaacactgcccatgtttcat
aataagacgttcacagtgcgtcgacgttttagtgatttcctgggactttatgagaagatg
ttggccaaacactccttgctgggctgcatcatcccacctccacctcagaagagcgtagtg
gggatgactaaagtaaaggtagggaaggaggattcgtcctcagcggagttcgtggaaaag
agacgagcagcactggagaggtatctacagagagtagtggcccatccatctctgttgcag
gacccggatgttcgagagtttttagagagagatgagttgcccagggcagtaaatactcag
actttgagtggacctggcctgctaaagatgataaacagagcgtcggatgcagtaaataag
atgaccataaaaatgaatgaatcagataattggtttgagagtaagctgcaggaggtggag
aatgaagagcagctgttaaggaggctgcatgctgctgttgactcattagtaaaccacagg
aaagagttgtgtagtaacacagcagtgtttagtaagagtgtggccatgctgggcagtgtg
gaggagaactctgcattgtctcgggcgctgtcacagctggcggaggtggaggataagatg
gagcagctgcatcagcaacaggccttcagtgatttcttcatcctcgctgagcttctggcc
gactacgtcagactgctgggggctgtgaggtgctgttttgagcagaggatgaaagtgtgg
cagcggctgcaggaagctcagagcacgctgcagaagaaacgagaggctgaggccaaactg
ctctgggcgaacaaacccgagaaactgcagcaagctaaagatgacataaatgagtgggag
tctaaagtcagtcagtatgagagagatttagaaagagtcacctgtactgtgcgcaaagaa
gtgctcagattcgagaaagagaaagccagagatttcaaacagcacgtagtgaaatacctg
gagtcccttcttcacacacagcatcggctggtgaagtgttgggaggccttcctgcctgag
gccaaagccatcgcctga
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integrated database retrieval system
