Ctenopharyngodon idella (grass carp): 127516932
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Entry
127516932 CDS
T08802
Name
(RefSeq) sortilin 1b isoform X1
KO
K12388
sortilin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127516932
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
127516932
NCBI-ProteinID:
XP_051757804
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Position
8:complement(16902237..16921221)
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AA seq
850 aa
AA seq
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MRGLGHFIALLFFPIAFCVDFHVEPGSYNAHRVYVKSPVAARSLIGTESDADISRIHRHI
QKRSADASDTCNGLKGYETKLTSNTHNWTFPDISGSVSLAWVGDGTGVVLALTTFQMPLV
FLRFGQSKLYRSENYGKSFEDVTELINNTFINTEFGIAIGPENSGKVILTGDSSGGTGGK
IFRSKDFGKSFVRTDLPFHPLMQIMYNPQNTDVLAAISIKNDLWISKDFGTTWTKIHEMV
CVVKWGMDSLFFSANLNGSCFDKGILVLRKSVDLGVNIKTVAEKIYSFGIGGRFLFASVM
AGSGTIMQSASEDILRAIHVSIDQGETWNMAQLPPVSHEQFYSILAANDEMVFMHVDEPG
DAGFGTIYVSDDRGTVYSKSLERHLYTTPGGETDFTNVTSLRGVFTTSVLAEDNSVQTVI
SFDQGGEWVPLKKPENSKCDSTAKDKEMCSLHIHASYSTSMRLNVPMLPLSEPNAVGLIL
AHGSVGDAISLLTPDVYVSDDGGYSWLLALKGPHHYAILDSGGLLVAVEHNQAKPISEIK
FSTDEGQCWHVYKFTETPMYFTGLASEPGARSVNVSLWGYEDAMISHWVTYTIDFKDLLT
RNCKESDYVQWLAHSDDISDPEDGCMLGYKERFLRVRKDSVCWIGRDYIVNKQPTPCRCT
LDDFLCDFGYSRKENSSECIEQADLKGHDLEICIHGRKEQLQTSGYRKIPGDKCEGGEQP
QRKLIDLSKRCVSDLLEPQMLASATTTVLEKTSNIYAPLFTLYLCNPQRGQSTSHTAPII
AIVIAILLTGTVFGVLFVKKYVCGGRFLVHRYSVLQHNAEANAIDEPLDTDVAGEPKNDF
HDDSDEDLLE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccttggacactttattgcacttttattttttcccattgcattttgtgtggat
ttccatgtggaacctggatcctataacgcgcaccgggtgtatgtgaagtctccagtagcc
gccagaagtctgatcgggacggaatcggatgccgatatttctcggatccatcgtcacatc
cagaaaagaagcgctgatgcgtcagatacatgtaatggtttaaagggatatgagaccaag
ttaactagcaacactcacaactggacttttccagatatcagtggatctgtgtctctggcc
tgggtgggggacggaactggggtagtgttggccctgacaacatttcagatgccattagtc
ttcctgcgattcggtcaatctaaactgtataggagtgaaaactatggaaagtcgtttgag
gatgtcacagaactcatcaacaacaccttcatcaacactgagtttgggattgctatcggt
ccggaaaactctggcaaggtgatcctcacaggagattcttctggaggcactggcggcaaa
attttccgttcaaaagactttggcaagagtttcgtccgcacagatttgcccttccaccct
ctaatgcagataatgtacaaccctcaaaacactgatgtgcttgcagccatcagcatcaag
aatgatctctggatctctaaagactttggtacaacatggacgaaaattcatgagatggtg
tgtgtggtgaaatggggaatggatagtctgttcttctctgccaaccttaacggatcctgc
tttgataaagggatactggtgctgaggaagtcagttgaccttggtgttaacattaagaca
gtcgccgagaaaatctactcatttgggatcggcggacgctttctgtttgcttcagttatg
gctggatcaggaaccataatgcagtcggcgtcagaggacattttacgcgcaatacatgtg
tcgatagaccaaggtgagacgtggaacatggcgcaacttcctcctgtcagtcacgagcag
ttctactcaatactagcagccaatgatgaaatggtcttcatgcatgtggatgaaccagga
gacgctgggtttggcaccatctatgtgtcagatgacagaggcactgtgtattccaagtct
ctagaacgccatctgtatacaactccagggggtgagacagacttcacgaatgtcacttcc
ctcagaggagtcttcactactagcgtgctggctgaggacaactcggtacagacagtaata
tcatttgatcagggaggagaatgggttcctttgaagaaaccagagaacagcaagtgtgat
tctacagccaaagataaagaaatgtgtagtctgcatattcatgcttcatacagcacctcc
atgaggctgaatgttcccatgctgcctctgagtgaacccaatgctgtgggactcatcttg
gctcatggcagcgtaggtgatgctatctcattattgacccctgatgtgtacgtgtctgat
gatggaggctactcctggctgctggctctgaaggggccgcaccactatgctatcctggat
tcaggaggcctcctggtggccgtggagcacaaccaagccaaacccatctctgagattaag
ttctccaccgatgaggggcaatgctggcatgtttataagttcaccgagacgccaatgtac
ttcacagggctggcctcagagcctggtgcccgctcagtgaatgtcagtctctggggttat
gaagatgctatgatcagccactgggtaacttacaccattgactttaaagacctgctgaca
cgtaactgcaaagaaagtgattatgtccagtggctggcgcactctgatgacatcagcgac
ccagaagatggttgcatgctgggttataaggaacgattcctgcgtgtgagaaaggactcg
gtgtgttggattggcagggattacattgtcaacaagcagcccacaccatgcagatgcact
ctggatgacttcctgtgtgactttggatactcccgtaaagagaacagctcagaatgtatt
gagcaggctgatctcaaaggccacgatttggagatctgcatccacgggagaaaggaacag
ctacagaccagtgggtacagaaagattccaggtgataaatgtgagggaggagaacaacca
caaagaaagttgattgacctgagcaagagatgtgtcagcgacctgctggaacctcagatg
ctggcctcagctacaactacagtgcttgagaaaacctcaaatatttatgcaccgctgttt
accctgtatctctgtaatccacagagaggtcaatccacctcacataccgcccctatcatt
gcgatcgtcattgccatcctgctgaccggcacagtgtttggggttctgtttgtaaagaag
tatgtctgtggtggaaggttcctggtacacagatactcagtcttacaacataatgcggaa
gccaacgccatagacgaaccactggacacagatgtggctggagaacctaagaatgatttc
catgatgactcagatgaggacctactggagtaa
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