Ctenopharyngodon idella (grass carp): 127517053
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Entry
127517053 CDS
T08802
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03083
Polycomb repressive complex
cide04980
Cobalamin transport and metabolism
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127517053
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
127517053
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127517053
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127517053
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127517053
03029 Mitochondrial biogenesis [BR:
cide03029
]
127517053
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127517053
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
127517053
HMT complexes
COMPASS/SET1 complex
127517053
MLL-HCF complex
127517053
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
127517053
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
127517053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
127517053
NCBI-ProteinID:
XP_051758080
LinkDB
All DBs
Position
8:30153260..30177551
Genome browser
AA seq
1969 aa
AA seq
DB search
MASSGTSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSNVAG
WDIPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGAAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMSW
ETILMDTLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQP
PSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVNPTPSLPVNSPKS
PVPATAAPAAQSMPLSGVTLVPQVPSPTTAMPTSPLAASPRGPAILKVAAPHSTPGTSVV
TVRQATPGGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQKIPP
SSATTVLNVPAGATIMKTVNVTPGSTTLPATVKVASPVMVTNPATRMLKTAAAQVGTSAI
STPNTPTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGSSGALISSLGK
MMSVVQTKPVQTSAVTGQAGGSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTTQAGG
TGTKPTILGISSVSPTTTNKPGTTIIKTIPMSALQQGATGVTSSTGIKSPITIITTKVVT
PGTGTPGKIITAVPKLTAGAGQQGLTQVVLKGAPGQPGTILRTLPMGGVRLVSPGTVSAG
KPTVTTLVVKGTTGVTTLGTVTGTVSTSAAGANVASANASLATPVTTLASIATLSSQVIN
PTAITVSAAQTSLATATIQSAPQPTQVTLITTPSGAEAQPAQDLPVSILASPTSEQPSTT
GADAGDGSGDAGTTVTLVCSNPPCETHETGTTNTATTASAKMGTGQVCSNPPCEMHVTGT
TNTATTASANMGRAQQVCTNPPSETHDTGTTNTATTASCNMGSKEMGTVNSKTGASSPAT
SSASGSEAATPVTESGAGSGSMRPENLRTGTTNTSTTARSNMGSDQTGTVQSSNKSQAAI
SSTLMPVCSSPSGETPETDTTKASAESGDVQQVCSNPPCETHETGTTNTATQSSSSMGSG
QTNVVQRVCSNPPCETHETGTTNTPTQASSTMGAGQSGTVQRVCSNPPCETHETGTTNTP
TQASSTMGAGQSGTVQTVCSNPPCETHETGTTNTPTQASSTMGAGQNGTVQRVCSNPPCE
THETGTTNTPTQSSSSIGAGQNGTVQMVCSNPPCETHETGTTNTATTATSSLETGEGTAQ
QGGDGQSDSGTSSEPTSSTEPANPTTQSRAITTVTQATPTPGPSVPEISSMAGSVVVAEV
PGEAEAMEQTSAEAVAAGEEPMQTECQGELGEEGAIRVVAIDESAAGDEGTMLQVHVAME
AQPGQGDQAEQMEAGVEAAEAMSLAAQDSEALALPQELMSAEGQQTTLMVTGLTPEELAV
TAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLSEGDGGQDGQQSTTIPIVLTQQELAAL
VQQQQQLQEAQAAAAQQLSAEAAAAALPTEGLAPADSLNDPASESNGHEMATAVTRAVAC
LLPRTTAETLAPSSTFAPSQPIMVASPAKMQAATALAEVANGIESAAGKQGAPPAVVKPP
VKKENQWFDVGIIKVTNTVVTHYYVPADDSAVTDDDSGAIPDYSRMKKIELSPGTAYKFR
VAGINACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSV
YLAIQSSQTVEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAAR
NEKGYGPATQVRWLQETNKDGSAAKPAAKRPVSSPDMKGAGPKKARSDQ
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaggcacctcggttctgcagccgcgctggaagagggttttgggctggtct
ggcccggttcctcgcccgagacacggacaccgagctgtggccattaaagagctgatggtg
gtgttcggcggagggaatgaaggcattgtggatgagctgcacgtctataatacagccacc
aatcagtggtttattcctgctgtccggggtgacattcctcctggctgcgctgcatatgga
tttgtgtgtgacggcaccagactccttgtgttcgggggcatggttgagtacggaaaatac
agcaacgatctttatgaactacaggccagtagatgggagtggaaacgtttgaagcccaaa
gcccccaaaaatggcccgccaccatgtcctcgcctgggccacagcttttctctagttgga
aacaaatgttacttgtttggtggactggcaaatgacagtgaagatcccaaaaacaatatt
cccagatacctgaatgacctctacacactcgagctacgcccggggtcaaacgtagcaggc
tgggacatccccattacatacggcgtgcttccccctcctcgtgagagccacactgctgtt
gtctacacagagaaaacgtccaaaaagtctcgtctcatcatctacggcggcatgagtggt
tgccgtcttggagacctctggactttagacatagatactttaacctggaacaaacctgcc
ataagtggtgcagcacctttgccccgcagtctccactctgccaccactataaccaacaag
atgtttgtgtttggtggatgggtccctctggttatggatgatgtcaaagtagccacacac
gagaaggaatggaagtgcactaacacgttggcctgcttaaatctagactcgatgtcttgg
gagactatcctgatggacactcttgaggataatatcccaagggccagagctggacactgc
tctgtggctattaacaataggctgtacgtctggagtggaagggacggctaccgcaaagcc
tggaacaaccaagtttgctgcaaagatctgtggtatttggagacagatcgtcctcagccc
ccatcacgtgtgcagctggtccgtgccaacactaactctctggaggtgagctggggggca
gtgcctaccgctgacacttacctgctgcagctgcagaaatacgacatccctgctgcaact
gctgccacatcgccaacggtcaaccccaccccatctttacccgtcaactcgcctaagagt
ccggtgcccgccactgctgctcctgcagctcagagcatgcctctctctggggtcacactg
gtgccacaagtcccttctcccaccaccgccatgccaaccagcccacttgcagcctcacct
cgtggaccagctattctcaaagtggcagcgcctcattcaacccccgggacgtcagttgtt
actgtgcgtcaggccactcctggaggaaaatccccagtcacggttacatcacttcctgca
ggcgtccgcatggttgtccccgcacagagcacccaggggacgccaattggcagcagccct
cagatgagtggcatggctgctttggctgcagctgcagccgccacacagaagatcccgccc
tcttctgcgaccactgtgctaaatgttccagccggagccaccatcatgaaaacggtcaac
gttactcctggatccacaactctgcctgctactgtcaaagtagcttcacctgtaatggtt
actaatcctgcgacccgaatgctgaaaacagctgcagcacaggtcggcacttccgccatc
tctactcccaacaccccgactcggccgatcataactgtgcacaaatcaggcacagtaact
gtagcccagcaggcccaggtcgtcaccaccatggtcggaggagtcaccaaaactataacc
cttgttaagagccccatcacaatgggtagcagcggtgctctgatctccagccttgggaaa
atgatgtctgttgtccagaccaaaccagtacaaacgtctgcggtcaccgggcaggctgga
ggcagtcctgtcactctaatacaaacaaagactcctctgcctgctggtaccattctgaaa
ctggtcacatctgctgatggcaagcccaccacaatcattacaactacccaagcaggaggg
actggcaccaaacctactatcctgggcatcagtagtgtctctccaactaccaccaacaaa
ccaggcaccaccattattaaaaccattcccatgtcggctttacaacaaggagcaacaggt
gtgactagcagtactggcatcaagtcccccatcacaattatcaccactaaggttgttact
cctggcacgggtactccggggaagatcataacagctgtgcctaagctgacagcaggtgca
ggacaacaggggctcacacaggtggtcctgaagggggcgccaggacagcccggcactatc
ctacgcactttgcctatgggcggagtgcgtctggtttcaccaggcactgtgtctgccggc
aaaccaacagttactacactggtagtcaagggcaccacgggagtcacaactctgggtaca
gtaactggtacagtatcaactagtgcggcaggggccaatgtggcaagcgctaatgccagc
ctagctactcctgtcaccacacttgcctctatcgccacattgtccagccaggtgatcaat
cccacggccatcactgtatctgctgcccagaccagcctcgccaccgctacaatacaatct
gcaccccagcctactcaagtaaccctgatcacgactccaagtggtgctgaagcccagcct
gcacaggatcttcctgtctccatcctggcctctcccacctcagagcagccctccaccact
ggtgctgatgctggtgacggctctggcgacgctggtaccactgtgacactggtctgctcc
aacccaccatgtgagacccatgagactggaacaaccaacacggctacaacggcttctgcc
aaaatgggcaccggacaggtttgttccaaccctccatgtgagatgcatgtaacaggcacc
accaacacagcaaccaccgcctctgcgaacatgggcagagcacaacaggtctgcaccaac
ccaccctcagagacacatgatactggcaccaccaacacagccactactgccagctgcaac
atgggctctaaagagatgggcaccgtgaacagcaagacaggggcttcttcgccggctaca
tcctcagcttctggttcagaagcagcaacacccgtcacagagagcggtgctggatctggc
tccatgcggccggagaatctccgcacgggtaccaccaacacctccactactgcccgctcc
aacatgggctctgaccagacgggaacggtgcagagctccaacaagagccaagctgccatc
tcctctactctgatgcctgtttgctccagcccttctggggaaacgcccgagacggacacc
acaaaagcttcagctgagtccggtgacgtccagcaggtctgttcaaatccaccctgtgag
acgcacgaaacgggcacgaccaatactgctacgcagtcaagctccagtatgggaagtggg
caaaccaatgttgtgcagagggtgtgctccaatccaccttgtgaaacacacgaaacgggc
accaccaacacgccgacccaggcctcatcaactatgggtgcaggacagagtggcactgta
cagagggtgtgttccaatcctccctgtgaaacacacgaaacgggcaccaccaacacaccg
acccaggcctcatctactatgggtgcaggacagagtggcaccgtgcaaacagtgtgttcc
aatcctccctgtgaaactcatgaaacgggcaccaccaacacaccgacccaggcctcatct
actatgggtgcaggacagaatggcactgtgcagagggtgtgttccaaccctccctgtgaa
actcatgaaacaggcactaccaacacgccaacccagtcctcgtcttctattggtgctgga
cagaacggcaccgtgcagatggtgtgttccaatccaccctgtgaaacacatgagacgggc
accaccaacacagccaccaccgctacaagcagcttagaaactggagaaggaacagcccag
cagggcggtgatggacagagtgacagcggcaccagctcagaacccacatcatctacagaa
ccagccaatcccacaacacaaagcagagccatcaccacagtaacacaggccacgcccact
ccaggaccatcagtaccggagatctcgtctatggccggatctgtggtagtggctgaggtc
ccgggagaggcggaggccatggagcagaccagcgcagaggccgtagctgcgggagaagag
cccatgcagaccgagtgtcagggagagctgggtgaagagggagccatcagggtcgttgcc
atagatgaaagtgcagcgggtgatgagggcaccatgctacaggttcatgttgccatggaa
gcacagccaggtcaaggagatcaggctgagcagatggaggccggtgtggaggctgcagaa
gcgatgagtctagctgctcaagactcagaagcgctcgctctgccccaggagctgatgtct
gcagaaggacagcaaaccaccctcatggtgactggactgaccccagaggagctggctgtg
acggcagcggctgaggctgcagcacaggctgcggctacagaagaagcgcaggccctcgcc
atccaggctgtcctacaggcggctcagcaggctgtgctcagtgagggagacggaggtcag
gacgggcagcaatccaccaccatccctatagttttgacccagcaggaactcgctgctcta
gttcagcaacagcagcagctccaggaggcgcaggcggccgcagcccagcagttaagcgct
gaagcagctgcagctgcgctgcccaccgaaggcttggcaccagcagacagcctcaacgac
ccagcatctgaaagcaatggccatgagatggcaaccgctgttacgagagccgtggcctgt
cttcttccacgcactactgcggagactctagccccatcaagtacttttgcaccatctcag
ccgattatggtcgccagccctgccaagatgcaagcagcaactgctttagctgaggtggcc
aatgggattgaatcagcagctgggaagcaaggagcgcctccagcagtcgtgaagccacca
gtgaagaaagagaatcagtggtttgatgttggaatcattaaggtcacaaacacggttgtc
actcactattacgtgccagctgacgattcagcggttactgatgatgattctggcgcaatc
ccagactacagccggatgaagaagatcgagctgtctccaggcactgcatacaagttccgc
gtggccggtatcaacgcgtgcggccgtggaacattctctgaggtctctgcgtttaagacc
tgcttacctggcttccctggagcaccgtgtgccatcaaaatcagcaagagccctgatggt
gcccacctgacctgggagcctccatcagtgacatcagggaagatcattgagtattcagtg
tatctggccatccagagctcgcagacagtcgaagcgaaagcatccactccggctcagctt
gcctttatgcgggtgtactgtgggcccaacccatcctgcctagtgcagtcgtctagtctc
tccaacgcccacatcgattacaccaccaaacccgccatcatcttccgcattgccgcccgc
aatgagaagggctacggccccgccacgcaagtcaggtggctacaagaaaccaataaagat
ggctctgcagctaaacctgcagcaaagaggccggtctcgtcacctgatatgaaaggtgct
ggtccaaagaaggccagatctgaccagtga
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integrated database retrieval system
