Ctenopharyngodon idella (grass carp): 127517177
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Entry
127517177 CDS
T08802
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127517177
03036 Chromosome and associated proteins [BR:
cide03036
]
127517177
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
127517177
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
127517177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
127517177
NCBI-ProteinID:
XP_051758403
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All DBs
Position
1:complement(33671489..33693958)
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AA seq
701 aa
AA seq
DB search
MSDTLEFNEIYQEVKGTWNDGRLRFSKQTVVFKNSKTGKVDSIPVSEFTQAQWRRVCLGH
GIKLCTSTGHIYKYDGFKDTDLEKISEYFKANYKVELIEKDMSVKGWNWGTAKFNGPLLS
FEVNDSPAFEIPLSSVSQCATGKNEVTVEFHQNDDTEVSLMEVRFYVPPTTGDEGSDPVE
AFAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDISLTLNMNEDEVERRFE
GKLNKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKATSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEGMKGNDNMYSDSDDDQHDAYLERMKEEGKIREEANDSDDSEGESDES
FNPGEEDDEIAEEYDSKASASESSADGGDSDEDRKKKPAKKAKFVKERKPRKKEKKAKDS
SAPKRPMSAYMLWLNASRDRIKSEHPGISVTEISKKAGEMWKQLGKDKKEEWEGKAEEAK
KEYERVMREYKESGGGSSGSSKKERKKKGGKNEEKKKRKSGGGREKEKERATGNDSFKSR
EFISSEESSSESEKGKGRKRKGSDDEEEVVSTPPSSESGSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactctggaattcaatgaaatttatcaggaggtcaagggcacttggaatgat
ggccgtctgcgcttcagtaagcagacagtggtgtttaaaaacagtaagaccgggaaggtg
gacagcattccggtctctgagttcactcaggcccagtggaggagagtctgtctgggtcac
ggcatcaaactgtgcaccagcactggccacatctacaaatatgatggcttcaaagacact
gaccttgagaagatctcagagtacttcaaagccaattacaaagtggagctgattgagaaa
gatatgagtgtgaagggctggaattggggcactgctaaatttaatgggccgttgctttca
tttgaggtgaatgacagtcctgcatttgagattccactctccagtgtatcccagtgtgct
acgggaaagaatgaggtcactgtggagtttcatcagaatgatgacacagaggtatccctc
atggaggtgcgcttctatgtcccacccaccacaggagacgagggttcagaccctgtggag
gcatttgctcagaacgttctgtccaaggcagatgtcatccaggctacaggagatgctgtg
tgtatcttcagagagttgcagtgcctcacacctaggggcaggtacgatatccgtatttat
ccaacattcctccatctgcatggtaaaacgtttgactacaagatcccatacaccacagtg
ctccgccttttcctgttgcctcataaagaccagcggcagatgttctttgtgatcagtctg
gacccgcccattaaacagggtcagacccgctatcattttctcattcttttgttctccaag
gaagaggacatcagcctcactctcaacatgaacgaggatgaggtggagagacgttttgaa
gggaaacttaataaaaacatgtctggctctctctatgagatggtcagcagagtcatgaag
gccctggtcaacaggaagatcacagtgcctggaaatttccaaggtcactcaggagctcaa
tgtataacatgttcatataaggccacttcagggctgttgtatcctttggaaagaggtttt
atctatgtacacaagcctcctgtgcacctgcgctttgaagagatcgcctgcgtgaacttc
gctcgtggaaccaccaccacccgctccttcgatttcgagattgagaccaagcagggcaat
cagtacaccttcagcagcatcgagagggaggaatatggtaaactctttgacttcgtcaat
gctaagaagttaagcatcaagaacagaggctttaaagagggtatgaaaggtaatgacaac
atgtacagcgactcagacgacgaccagcatgatgcgtacctggagcgcatgaaagaagag
ggcaagatccgtgaggaggccaatgacagtgacgactcagagggcgagagtgatgaatct
tttaatcctggagaagaagatgatgaaattgcggaggagtacgacagtaaggcctctgcc
agtgaaagcagcgctgatggtggggacagtgatgaagaccgcaagaagaaaccagccaag
aaagcaaaatttgtaaaagaaagaaaaccacgcaagaaagagaaaaaggcaaaggatagc
agtgcccccaagaggccaatgagtgcctacatgctctggctgaacgctagcagagaccgc
attaaatcagagcacccaggcatctctgtcacagagatctcaaaaaaagctggagaaatg
tggaaacaacttggcaaagacaagaaagaggagtgggaaggaaaagcagaggaagcaaag
aaagagtatgaacgagtgatgagagagtacaaggagagtggtggaggatcttcaggcagc
tcaaaaaaagagaggaaaaagaaaggagggaagaatgaagaaaagaagaaaaggaagtca
ggtggtgggagggagaaagagaaggagcgagcaacaggcaacgacagctttaaaagtcga
gagttcatatccagtgaagagagctcatcagagtcagaaaaaggcaagggacggaagcgc
aaggggtctgatgatgaagaggaagtggtcagcacaccaccaagctctgagtctggctca
gactga
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