Ctenopharyngodon idella (grass carp): 127517202
Help
Entry
127517202 CDS
T08802
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X1
KO
K08538
farnesoid X receptor beta
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127517202
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cide03310
]
127517202
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127517202
Nuclear receptors [BR:
cide03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
127517202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127517202
NCBI-ProteinID:
XP_051758465
LinkDB
All DBs
Position
8:28492497..28509449
Genome browser
AA seq
484 aa
AA seq
DB search
MREGTDSEMSMSVGGYLSASDTFDITEPPQYYDVLVDPLSCSYQEPDLQSPLYGQQPFSP
VNVQFSMYGAPNAQVCNPPYPYSHQCSEYICEPEMEVQSPTRGSIIGLPVLKRSRMGHGP
RVKGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYRCKSGGSCEMDMYMRRK
CQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGYKNRGHNGSTGRAEDDYSESRSVSSTS
RITTRVSSSFSREQRCILNRIVEAYRRYIIQDNTHCSVPLWSSLTNTDLTPPQTEKLLQF
LRSVPGFELLDSSDQNTLLSSSSVEVMFLLLAQQFSENPTSVSTALYPANSNNSNPDWAK
TLESKSGNSHRILTHSGLNDELLRSVVNFLHSMVTIAVTEAEYALLTATAVLCSDRPSLR
AVSCVENLQEFVLELLSRACCCCSQGTAQDPRRFARLLGRLTELRTLRHNHLTLLPQQPW
DMQS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagagagggcacagattctgagatgagcatgtcagtcggcggctacctctccgcatca
gacacgtttgacatcacagagccaccgcagtactatgatgttcttgtggatccactgagc
tgctcttaccaagaaccggatctacaaagtcctctctatggccagcagccgttcagccct
gttaatgtgcagttctccatgtacggagcgccaaacgctcaagtgtgcaacccaccgtac
ccctacagccatcagtgctctgaatacatctgtgagcccgagatggaggtccaaagccca
acaagaggcagcattattggtcttccagtgctaaaaaggtccaggatgggccatggacct
cgggtgaaaggccaggatgagctgtgtgtggtgtgtggagataaagcctcgggatatcac
tacaatgccctcacctgtgagggctgcaaaggtttcttcagacgcagcgtgactaaaaag
gccgtgtaccgctgcaaaagtggtggaagctgtgagatggacatgtacatgcggagaaag
tgtcaggactgcagactacgcaaatgtagagccgtcgggatgctggcagagtgcctgctt
acagaagtgcaatgccagtcgaagagactgaggaagggctacaagaacagaggacacaac
gggtcaacaggaagagctgaagatgactactctgaaagcagaagcgtctcgtctaccagc
agaatcaccacacgggtatcatctagtttctccagagagcagaggtgcattctgaataga
attgttgaggcttatcgtaggtacataattcaagacaacacgcactgctcggtgcctctg
tggtcaagtttaacaaatacagatctgactcctcctcaaacagagaagcttttacaattt
ttgaggagtgtacctgggtttgagcttttggatagttctgaccagaacacacttctgtcc
agttcttcagttgaagtcatgttcctactcttagctcagcagttctccgagaaccccact
agtgttagcactgctttatacccagcaaattcaaataactcaaaccctgattgggcgaaa
actttagagtccaagagtgggaacagccacaggatactgacccactcagggttgaacgat
gagctcttgaggtctgtggtaaatttcctccacagcatggtgactattgcggtaacagag
gctgaatatgcacttctaacagcgacagcagtgttgtgttcagacaggccatctctgcgt
gcggtgagctgtgttgagaacttacaggagtttgttttggagctcctgtcccgagcttgc
tgctgctgtagtcaggggacagcgcaggacccgcgccgcttcgccaggctcctgggacgg
ctgacggagctgagaacactacgacacaaccacctcacccttctcccacagcaaccctgg
gacatgcagtcctga
DBGET
integrated database retrieval system
