Ctenopharyngodon idella (grass carp): 127517237
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Entry
127517237 CDS
T08802
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127517237
Membrane trafficking [BR:
cide04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127517237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
127517237
NCBI-ProteinID:
XP_051758531
LinkDB
All DBs
Position
8:15383872..15430962
Genome browser
AA seq
1485 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNNEVLKTAERLYRAAWIAKQQRINLDRLIL
TSVEASPAECCQHAKFLEDTQFVDGYKTLGFQESIYGEFLGRLRENPRLVASCLVAGERL
NHEHTQGVIHTVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKLIERFTPAQQERLFGEKGT
DEYRRKVQAGVEANEAKLVALVNTFIGYLKQNTYCFPQSLRWIVSQMYKTLARVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMSDADDGD
PRRKSSLSKFDKTCVSAFLDVVIGGRAVETPPMSSMNLLEGLTRTVVYMTHNQLLALVDF
VRSVTAGDQLREEDHLALETLLANVPQSRTTKSNSLELTPSNTPQLSPATTPANKKNRLP
IGQQLAAITCWEPSATALSAHIPLVTPFAGSRSRSRSNMAQEGEIEASSQESLQEVTPEE
VLVISFGTSPQTVPGMMSENEVLTLNLGDGGQGDAPVDDNKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEVESVSEGGPGPSGSNGAEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAENALGGMLCLPVL
LDPYGSTISETTSEAWSVEVLPSDSETADLKQEERLQELESCSGVGSTSDDTEVREVSSR
PSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEDSAHGAHSLSCAPS
QTDSLLAMFDPLSSGEGSCTGTIVRPKVHYPRPPHPPPDPPIPEASIMSHQEPRPPLFAP
HLAQGDLEHPKQRHSYPERLVRSRSTDVVSAGRRPNSDPGLNRRTMMEEREPAGAFSTGP
TSSPSKDSLKGESEDRKDSDDEKSDRNRPWWKKRFVPAIPKVLYWTAEGELPVPIAGLRK
RDKPEKDEQGAERVPQDEPSMLRQSSKTQSAEAIMDKYIRYMEKRPAPSDGAVAGTYIGQ
EPCREGDSEHDSPKDEVLQNISADDLPDSASQTAPPQDKTFSFSDIKKKLRMALCSADSV
VFPIIPPATTRNGLPDHADPEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVSHLDP
RTCRKLLTAMAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVC
VRLLLEHMESKMLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMAHDAIWQYASEEQLQDA
QMAIERSVMNRIFKLAFYPNQDGDIHRDELFHEHIQRLSKVVTANHKALQIPEVYLKEAP
WPSAQAEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDAVPGADDFVPVLVFVLIKA
NPPCLLSTIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcacactctggcccaccacctgaagcaggaacggctgtatgtg
gcatcagagaagcagctcatccagcggctcaacaacgaagtgctaaagacggcggagagg
ctctaccgcgcagcctggatcgccaaacaacaaaggatcaacctcgaccgcctcatccta
accagtgtggaggcctctcctgcggaatgctgccagcatgccaagtttctggaagataca
cagtttgtggatggttataagacactaggttttcaggagagcatctacggggagttcttg
ggccggttgagggagaacccgcgattggtggcatcctgtctggtggcaggagagagactc
aatcatgagcacacgcagggggtcatacacacagtcttcacctcactctatggcaactgc
atcatgcaagaggatgaaagctacctgttgcaggtgctgcgttatttggtggaatttgaa
ctaaaggagagtgacaaccctcgtcgcctgttacggcgaggcacgtgtgcctttagcatc
ctcttcaaactcttctctgagggcctgtattcagctaagcttttcctcactgcaaccctc
cacgagcccatcatgcaactgctggttgaggatgaggaccatctagagacagatccagcc
aaactcatagagcgctttaccccagcccagcaggagcgcctgtttggggagaaaggcaca
gatgagtaccgcagaaaagttcaggcgggggtggaggccaatgaggctaagctcgtggcc
ctggtcaacacctttattggctacctgaagcagaacacctattgcttcccacagagtctg
cgttggattgtgtctcagatgtataagacgctggcacgggtggagaggttagaggtcggg
gaggtgaggacgatgtgcaccgacttgctgctcacttgcttcatctgtccagccattgtc
aaccctgaacagtatggcatcatctcagatgcacccatcaatgaggtggctcgtttcaac
ctcatgcaggtggggcagttattgcaacagttagccatgtctgatgcagatgatggagat
cctcgacgtaaaagcagtttatcaaagtttgataagacgtgtgtctctgcctttttggat
gtcgtcattggtggaagggctgtcgagactccacccatgtcgtcaatgaatttacttgag
ggcctcacgcggacggtggtttacatgactcataatcagcttttagctctggtggacttt
gtgcgtagtgtcactgcaggtgatcagctcagagaagaagaccacctggctctggaaacc
ctactagccaatgtacctcaatcccgcacaacaaagagcaacagcctggagctcacaccc
tctaacacgccccagctctccccagctaccacacccgccaacaagaagaacagactccct
attggacaacagttggcagccataacgtgttgggagccctctgccactgccctgtccgct
catatacccttagtaaccccgtttgcaggctctcgcagccgaagccgatccaacatggcc
caggagggtgagattgaagctagctcccaggagtctctgcaggaggtcacgcctgaggaa
gtgctagtcatctccttcggaacctcaccacagactgtacctgggatgatgtcagaaaac
gaggttctgactctgaatcttggagatggtggacaaggagatgcccctgtcgacgacaat
aaactgcacggcaagcctgacaaaacgctgcgcttctcactttgcagtgacaacctggag
ggcatttctgagggcccgtctaaccgctccaattcagtttcttctttggacttggaggtg
gagtctgtgtcagaaggtggaccagggccatctggtagtaatggtgcagaggctttgcag
ctactggaacatgaacaagccactacacaggataatttggacgataaactgcgcaagttt
gagattcgggacatgatgggcctgacagatgatcgagacatttctgagacggtcagtgag
acttggagcactgatgtcctgggcagtgacttcgatcccaatatggatgaggatcgtctg
caggagatagcaggggcagcggagaatgcgttgggcggcatgctgtgtttgccagtgctt
ctggacccatacggttctaccatctctgagacaacgagcgaagcgtggagcgttgaggtt
ctgccaagtgactcagaaactgcagacttgaagcaggaggaacgcttgcaggagctggag
agctgctcgggtgtgggtagcacttcagatgacaccgaggtcagagaggtcagctcccga
cccagcaccccgggactcagcgttgtttcaggcatcagtgccacgtcagaggacatcccc
aataagattgaagacctacgctcagagtgcagctcagattttggaggcaaagactccgtg
accagtccagatggagaggactctgctcatggagctcacagtctatcctgtgcaccctct
caaacagattcactgctggccatgtttgatcccctctcctctggagaaggttcatgcact
ggcaccatcgtgcggcccaaggtgcactatccccgaccccctcaccctccccctgaccca
cccattccagaggccagcataatgagccaccaggagcctcgcccgcccctcttcgccccc
cacctggcacagggtgacctggagcatcccaagcagaggcactcttaccctgaaaggctg
gtgagaagccgcagcacagatgtggtgtccgctggacgcagacccaacagtgatcccgga
ctgaaccgcaggaccatgatggaggagagagaaccggctggggccttctccacagggccc
acctcttctcccagcaaggattccctaaaaggagagtctgaggacagaaaggacagtgat
gatgagaagtctgacaggaacagaccctggtggaagaagcgctttgttcctgccattcct
aaagtgctctattggactgcagagggtgaactcccagtgccgatcgccgggctccgaaag
cgggacaagccagaaaaagacgagcaaggagcagagagggtcccacaagatgagccttca
atgctcagacagagctctaagacccagtcagcggaggcaataatggacaagtacatcagg
tacatggagaaacgacccgcccccagtgatggagcagttgccggaacctatattggacaa
gagccttgtagagaaggagacagtgagcatgactctcctaaagatgaagttctgcagaac
atctctgcagatgaccttccagactctgccagtcagacagcaccacctcaggacaagacg
ttctccttcagtgatattaagaaaaagctacgcatggcgctgtgctctgcagattcggtt
gtatttcccatcattccacctgctacaacacgtaacggcctcccggaccatgcagatccc
gaagacaacgagattgtgtgctttctgaaggtgcagctggcggaggccattaacctgcag
gataagaaccagatggctcagatccaggagactacgcgctgcgtcagccacctcgacccc
cgcacctgcagaaaactgctcactgccatggcagaggactacaggaagcgggctccgtac
atcgcctatctgacgcggtgtcggcaaggcctgcagacgtctcaggctcatctggagaga
ctcctgcagagagtgttgagagataaagaagtggccaaccgctactttaccaccgtctgt
gtccgactgctgctggaacacatggagtctaagatgcttgacttcatcaaagcatttcag
ggctgcacagcagctgacgataagacagcagccgtggaggatttcctgcgttacctgtat
ggagccatggcccatgatgccatctggcagtatgccagtgaggagcagctccaggacgcc
cagatggccatcgaacgcagcgtcatgaaccgcatcttcaaactggcattctaccccaat
caggatggggacatccacagagacgagctattccacgagcacattcagcgtctttctaaa
gtggtgacggccaatcacaaagctctgcagatcccggaggtgtatctgaaggaggcaccg
tggccctcagcacaagctgagatcaggaccatcaatgcctataagaccccacgagataag
gtgcagtgtatcctgcgcatgtgctccaccattatgaacctgctcagcctggccaatgag
gatgctgtacccggggcggacgacttcgtccctgtgctcgtctttgttctgattaaggca
aacccaccctgccttctgtccaccattcagtacatcaataatttctacgccagcaggctg
agcggggaggagtgctattggtggatgcagttcactgccgccgtggaattcattaaaacc
atcgacgatcgcaagtga
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