Ctenopharyngodon idella (grass carp): 127517278
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Entry
127517278 CDS
T08802
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127517278
Spliceosome [BR:
cide03041
]
Common components
Common spliceosomal components
General mRNP proteins
127517278
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
PRP38_assoc
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
127517278
NCBI-ProteinID:
XP_051758607
LinkDB
All DBs
Position
8:11121075..11135057
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AA seq
525 aa
AA seq
DB search
MADDFDVEAMLEAPYKKGESKSSSANGHNEERSKKKRRSNSRSPSPGRRRSRSGGRKKSR
ERRRSRSRERRRSRSKERKRSRSRSKDRGGRYRGRKSPFMGPKLNGGPGGKTGPQHFTKH
SRRRSRSKSPFKKDKSPVRQPIDNLSPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVR
DVRMISDRNSRRSKGIAYIEFVEATSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAS
MLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFAD
AECAKKALEQLNGFELAGRPMKVGHVTERSDASSASSFLDNDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPAAAKQALQMSGSVAFGNLANASAAPPLIPNPGMNQAMNLPTQPLATHC
LQLSNMFSPQTENEPGWDMEIRDDVIEECKKHGGVVHIYVDKNSAQGNVYVKCPTIPVAM
AVVSALHGRWFAGKMITAAYVPLPTYHNLFPDAATATELLRPMHR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacttcgatgttgaggccatgctggaagctccttataagaagggtgaaagc
aagtcttctagcgccaatggtcataatgaggaacgcagcaaaaagaaaagacgcagcaac
agtcgtagtccgagtccaggccgccggaggagtagaagcggggggcgcaagaagagccga
gaacgacgcaggagccgcagccgtgagcgaagacgttcacgaagcaaagagcgcaaacgt
tcacgatcccgcagcaaggatcgtggtggacgttatcgtggacgcaaaagcccctttatg
gggccgaaattaaatggtggtcccggagggaagaccggcccacaacatttcaccaaacac
agtcgcaggcgctctcggagcaaaagcccgtttaagaaggacaaaagccccgtcaggcaa
ccgatagataatctaagcccagaagagagagacgcccgcacagtgttctgcatgcagctc
gctgccagaattagacccagagatctggaagaattcttctctgcagtgggaaaagtccgt
gacgtcaggatgatctcagatagaaactctcggaggtcaaagggcattgcctacattgag
tttgtggaggccacatcagtaccactggcaatcggcctgacggggcagagagttctggga
gtgcctatcatagtccaggcctcgcaggctgagaagaacagggccgcagccatggctagc
atgctccagagaggtggtgcagggcccatgcggctgtatgttggctccctgcacttcaat
ataactgaggacatgctcaggggcatttttgagccgtttggaaagattgagggcatccag
ctaatgatggacagtgagacgggcaggtcgaaaggatacggcttcatatcatttgcagat
gcagaatgtgctaaaaaagccctggagcagctaaatggttttgagcttgcggggcggcca
atgaaggtgggtcatgttaccgagcgttcggatgcctcatcggccagctccttcttggac
aatgatgagctggagagaactggcattgacttgggcacgacgggtcgccttcagctgatg
gcaagactcgcagaaggcacaggactgcagattcctgctgctgccaagcaggccttacag
atgagtggttctgtggcgtttggaaatctggcaaatgcctcagccgcacctcctcttatt
cccaatcctgggatgaaccaagctatgaaccttccaacccagcctctggccacacactgt
ttacagctctccaacatgttcagtccacagacggaaaacgaacctggctgggacatggag
atacgagatgatgtcatcgaagagtgcaaaaaacacggaggagtggttcacatatacgtc
gacaaaaactctgctcaaggaaatgtttatgtaaaatgtccaaccatcccagtagcaatg
gctgttgtcagcgctctgcacgggcggtggtttgcaggtaaaatgatcacagctgcctac
gtgcccctccctacataccataacctgtttccagacgctgccacagccacggagctcctg
aggcccatgcaccggtga
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integrated database retrieval system
