Ctenopharyngodon idella (grass carp): 127517326
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Entry
127517326 CDS
T08802
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
cide
Ctenopharyngodon idella (grass carp)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
127517326
NCBI-ProteinID:
XP_051758742
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Position
8:33824157..33889006
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AA seq
998 aa
AA seq
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MRSQALLLYLTVLQTAGAAFPEDTEPISISHGNYTKQYPAFVGHKPGRNNTQRHKLDIQL
IVIMNRTLYVAARDHIYTVDIETANTEEIFFSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQSDDSLFVCGTNAFNPSCRTYKMDSLDALGDEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSATLRTVKHDSKWLKEPYFVQAVDYGEFIYFFFREIA
MEYNSMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKTRLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMAEIALAFTGRFKEQKSPDSTWTPVPEEK
VPRPRPGVCAGTSSGEKFKVSNEFPDETLNFIKIHPLMDEAVPSIANRPWFLKTMVRYRL
TRIAVDNAAGPHRNHTVVFLGSERGIVLKFLAKMRSGFLNDSLFLEELNVYNPEKCSIDG
VEDKRIVSMQIDSRSHSLFVAFTSCVVKVPLSRCERHGKCKKSCIASRDPYCGWVSEGAC
KEITSDTKWSFEQDVEQGNTDGLGDCQNSFVALNDHQHRHQGLSDITQNAPRGLLTTVPP
SAGGPLGRGRMVKPKDAPLASDKSDPYMPVSSETQQESAGVIRETYHRDRDQMVPVTLLA
IAVILAFVMGAIFSGIVVYCVCDHHRRRDFELPGRKDKDSVQSRRGSMNSVTKLTGLFET
QAKDGRPEAILTPLMHNGRLSNGKMLIKADQHPDLTALPTPESTPMQPRRKPSRGSREWE
RNQNLINACTKDLSSMGSPVIPTDLPLRASPGHIPSVVVLPLPQHQQAYQHEYVEQPHRG
GDLADDQAATLEYKSLKSPCLGLADGEGAPPRVPQREASLSAVVPPAVPQMGKRLDVHSS
MYSRGYPMTSGLKKQHNTNSSNSSHMSRNHSFRVETPPPAPQRVDSMHVTSPPPVLGLSR
HPSLSSYGSLVRQLKPDVPPKPSLVSLSTKVKSGDPCT
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgcaggccttgttgctgtatctcacagtgctgcagacggctggagccgctttc
ccagaagacaccgagccaatcagtatttcacatggcaactataccaaacaatatccagcg
ttcgtgggacacaaaccgggaaggaacaacacgcaacgacacaaactggacatccagctg
atcgtcatcatgaatcggactctctatgtcgctgccagagatcacatttacacagtggac
attgagacggccaacacagaggagatctttttcagcaagaagctgacgtggaagtccaga
caggccgacgtggacacctgcagaatgaaaggaaaacacaaggacgaatgccacaatttc
atcaaggttctcctgcagcagagcgacgactctctgtttgtgtgcggaacaaatgcattc
aacccgtcctgtcgaacctacaagatggacagcctggacgctctgggcgatgaaatcagt
ggtatggcccgatgcccgtacgacgccaaacacgccaacgtcgccctgttcgccgatggg
aagttatattccgccacagtcacagactttctggcgattgacgcggtgatctatcgcagt
ctgggagacagtgcgaccctgaggacggtcaaacacgactccaaatggctgaaagagccg
tattttgtccaggcagtcgattatggcgagttcatctacttcttctttcgggaaatcgcc
atggagtacaacagcatggggaaggtggtgttcccacgtgtggcacgcgtgtgtaaaaat
gatcgtggcggatcgcagcgcgtcctggagaaacagtggacatccttcctaaagacgcga
ctcaactgctcaatccctggagactctcatttctacttcaacatcctgcaggccgtcacc
gacgtcatccacatcaacggacgggatgtcgtcatggcaaccttctccacgccatataac
agtatcccgggctcggcggtctgcgcgtatgacatggcagagatcgctctggccttcacc
ggacgcttcaaagagcagaaatcaccagattccacctggacacccgtgccggaggagaag
gtgcccagacccaggccgggcgtctgcgcaggaacttcctctggtgagaaattcaaagtg
tccaacgagtttccagatgaaacgctgaacttcatcaagattcacccgctgatggacgag
gccgtgccatccatcgccaaccgcccgtggtttctcaagacaatggttcgataccgtctc
actcggatagccgtggataacgccgccggccctcatcgcaaccacaccgtggttttcctg
ggttccgagcgaggaatcgttctgaagttcctggccaaaatgcggagcggcttcctgaac
gacagcctgtttctggaggagctgaacgtctacaacccagagaagtgcagcattgacggc
gtggaggacaaacgcatcgtcagcatgcagatcgacagccggagtcactctctgttcgtg
gccttcacctcctgcgtcgtcaaagtcccgctgtcacgctgcgaacggcacggcaagtgc
aaaaagtcctgtatcgcctccagggacccgtactgcggctgggtgtcagagggcgcctgt
aaagaaatcacatctgacacaaaatggtcgttcgagcaggacgtggaacagggcaacaca
gatggactgggcgactgccaaaattcgtttgtggcgctcaatgaccatcagcacaggcat
cagggtctgagtgatattacccagaatgctccacgcggcctcctcaccaccgtccctccc
tccgccgggggcccgctgggacggggccgtatggtcaaacccaaggacgcgccactggcc
agcgataagagcgacccgtatatgcccgtgtcgtctgagacgcagcaggagagcgccggg
gtgatccgtgagacgtaccacagagaccgcgatcagatggttcccgtgacgctcctggcc
atcgctgtcatcctcgccttcgtcatgggcgccatcttctctggcatcgtcgtctactgc
gtttgcgaccaccaccgccggcgcgactttgagctacccggccgcaaagacaaggactct
gttcagtccagacgaggctccatgaacagcgtcaccaagctgacggggctgttcgagacg
caagccaaggatggccggccggaggccattctgaccccgctcatgcacaacggtcgtctg
tccaacggcaagatgctaatcaaagctgaccagcacccggatctgaccgccctgcccacg
cccgagtctacacccatgcagccgcggcgcaagcccagccgaggtagccgtgagtgggag
cgcaaccagaacctgatcaacgcctgcaccaaagacttgtcctcaatgggctctccggtc
atcccgacggacctgccgctgcgggcgtctccgggccacatccccagcgtggtggtgctg
cctttgccccaacatcagcaagcctaccagcacgagtacgtggagcagccccaccgcggc
ggagaccttgcggatgaccaggccgccacgctggagtacaagtcccttaagagcccgtgt
ctgggcctggcggacggcgagggagcgccgccacgtgtcccccagcgagaggcgtctctg
agcgccgtggtcccaccggccgtcccgcagatgggcaagaggctggatgtgcattcgtcc
atgtacagccgaggctatcccatgacctcgggcctcaagaaacagcacaacaccaactcg
tccaactcatcccacatgtccaggaaccacagcttccgtgtggagacgccgccacccgcc
ccacagcgggtagactccatgcacgtcacctctccgccaccggtcctcggactgtcgcgc
caccccagcctgagctcgtacggctctctcgtaaggcagctcaagcccgacgtccctccc
aaaccatcactggtgtccctttccacgaaagtcaaatccggcgacccctgcacataa
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