Ctenopharyngodon idella (grass carp): 127517357
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Entry
127517357 CDS
T08802
Name
(RefSeq) G-patch domain and KOW motifs-containing protein
KO
K13101
G patch domain and KOW motifs-containing protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127517357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127517357
Spliceosome [BR:
cide03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127517357
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPKOW_C
G-patch_2
KOW
G-patch
KOW7_SPT5
SH3_KIN17_C
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
127517357
NCBI-ProteinID:
XP_051758798
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All DBs
Position
8:8939156..8952170
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AA seq
510 aa
AA seq
DB search
MASPEPHQERQSLKINISQDDGGKKSAPISFGFSKTLSRAKPGKAEERDYLVEVEGKELK
GTKPVEKPKELVIPLIHKNRWYRQDAERGDKSSEDKTKDPPQEVQDTVESQAVKELIEES
QKHQERWKNGPQSDPNLSIPLLMQNQAPEGFEDGDKVNVDLRPESSTEADYELVPVEAYG
LAMLKGMGWKQGEGIGRTFKQDVKPIEHQLRPKGLGLGADRSAIRDLEPGVPKRPPKPGD
EKGKEEEALVLGPGGCVQVLAGAHKDLYGKIEGVDPDNARVVVKLAIGGKTVTIIQHSLK
LVTRKEYDKYSKDLSRLSKAHKDKEREKEREQQREREQKLNGKDERGKTDRDREREKDRE
KDQKKRKHRESSGDREKPPPAKESRPSPPAPSWLQRDLRVRFIDKAFKGGKYYNSKMRVE
DVVTPHTCVCRTEDGRLLDDIRQKMLETIVPKNDSDYIMVVLGEHRGQVGRILKRDREKC
RAMVQLDRYEEQLFTLDYDAICHYVGGTEH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccggagccgcatcaggagcgtcaatcactgaagattaatattagccaggat
gatggaggcaaaaaatctgctccaatatctttcggttttagtaaaacattgagcagggcc
aaaccagggaaagcggaagagcgagattatttagttgaagtcgaagggaaagaactaaaa
ggaaccaaaccggtggagaaaccgaaggagctggttatcccgttgatccacaagaaccgc
tggtaccggcaggatgctgagcgaggggacaagagcagcgaggacaagaccaaagatccg
ccccaggaggtgcaggacacggtggagtctcaagccgtcaaagaactcatcgaagagtct
caaaaacaccaggagagatggaagaacggaccacagtcggatccaaacctttccattcct
cttctcatgcagaatcaagctcctgagggctttgaggatggtgacaaagtcaacgtggat
ttgcgaccagagtcgtccacagaagcagactatgaacttgttcctgtggaggcttatggg
ttggccatgctgaagggaatgggctggaagcagggagagggaattggacgcacatttaaa
caagatgtgaagcctatagagcatcagttgaggcctaaaggactgggtttgggtgctgat
cgctcggccattagagacctggagcccggcgtccccaagagaccccctaaacctggtgat
gagaaggggaaagaagaggaggcactggttctggggcctggaggatgtgtgcaggtcctg
gcaggagcccataaagacctgtacgggaagatagagggagtggatccagataacgccaga
gttgtagtcaaacttgccatcggcggaaagacagtaaccatcattcagcactctttaaaa
cttgtcacccgcaaggaatacgacaaatacagcaaagacctcagtcgtcttagtaaagca
cacaaggacaaagaaagagaaaaagagcgggaacagcagagagaacgagagcaaaagtta
aacggtaaagatgagagaggaaagacagatagagatcgggagagggagaaggacagagag
aaagatcagaagaaaaggaaacacagagaatcaagtggagacagagagaagcctcccccg
gcaaaagagtcgcgtccctccccaccagccccctcatggctccaacgggacctccgtgtg
cgtttcatagataaagcattcaaaggaggcaaatactacaactcaaagatgagagtcgag
gatgtcgtgacgccccacacttgtgtgtgtcgtacagaggacggcaggctgctggacgat
attagacagaaaatgctggagaccattgtacccaagaatgactcggactacattatggtg
gttctgggagaacacagaggacaggtgggccgcatcctgaagcgagaccgagagaaatgt
cgagccatggttcagctggaccgttacgaagagcagctgttcacactcgactatgacgcc
atctgtcattatgtgggcggaacagaacactga
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