Ctenopharyngodon idella (grass carp): 127517371
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Entry
127517371 CDS
T08802
Name
(RefSeq) syntaxin-3
KO
K08486
syntaxin 1B/2/3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127517371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127517371
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127517371
Membrane trafficking [BR:
cide04131
]
SNARE
Syntaxin (Qa)
Stx-PM
127517371
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
127517371
Exosomal proteins of other body fluids (saliva and urine)
127517371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Relaxase_C
DUF3540
ATG17_like
Baculo_PEP_C
Baculo_F
Spectrin_Anc-1
PI_PP_C
FlaC_arch
AAA_13
FUSC
YtxH
Occludin_ELL
GNVR
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
127517371
NCBI-ProteinID:
XP_051758825
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All DBs
Position
1:complement(33596629..33600551)
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AA seq
285 aa
AA seq
DB search
MKDRLEQLKAKSDQAPDDVEIPVENKEFMDEFFAQIEEIRTSIDKIDENIGEIKRLYSVI
LSAPTSDQKTQDELEAVTNEIKKLANNARNKLKSIEQSLASNTEERVSADIRIKKSQHAI
LAKKFVEVMTKYNEAQVEFREKSKGRIQRQLEITGKVTTDEELEEMLDGGNAAVFTAGIM
DSGISKQALSEIEARHKDIMRLESSIKELHDMFVDIAMLVENQGSMIDRIESNMDQSVGF
VERAVADTKKAAKFQQEARRKKMMIMLCCTILAVIGGSLVYSWLT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgcctggaacaactaaaagcgaaatcggatcaagctcctgatgatgtggaa
attccagtggaaaataaagaattcatggatgaattcttcgctcagattgaggaaatccgc
accagtatagacaagattgatgaaaatataggcgagataaagcgactgtattctgtcatc
ctttctgcacctacatcagaccagaagacacaggatgaattggaggcagttactaatgag
ataaagaaactggccaacaatgctcgcaacaaactcaaaagcattgagcagagcttggca
tccaacacagaggagagggtttcagcagatatacggataaagaaatctcagcatgccatt
cttgctaagaagttcgtagaggtcatgaccaaatacaatgaagcccaggtggagtttaga
gagaagagcaaagggcgcatccaaagacagctggagatcactggcaaagttactactgat
gaggaactggaggaaatgctggatggaggaaacgctgcagtattcacagcaggaattatg
gactctgggatatcaaaacaggcactaagtgagattgaggcacgtcacaaagatattatg
cgactggagagcagcataaaagagttgcatgacatgtttgtggacattgcaatgctagtg
gagaatcagggaagtatgattgacaggattgagagcaacatggatcagtcagtgggtttt
gtggaaagagctgtggctgacactaaaaaggctgccaagttccaacaggaagcacgcagg
aagaagatgatgatcatgctgtgttgcacgattcttgcggtcatcggtggttctctggtg
tatagctggctgacataa
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