Ctenopharyngodon idella (grass carp): 127517452
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Entry
127517452 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga
KO
K06840
semaphorin 3
Organism
cide
Ctenopharyngodon idella (grass carp)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_3
Ig_2
ig
I-set
ATR1_N
Motif
Other DBs
NCBI-GeneID:
127517452
NCBI-ProteinID:
XP_051759083
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Position
8:complement(17264676..17285779)
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AA seq
750 aa
AA seq
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MGLTMRVMETRLLLLLWALFVFEVACTHRSAPRVHLAFKELMDTRTARPFSFSFNTSDYR
ILHVDPDQGRLYLGSREYLVSLDMQNINKEPLIIHWPAPAQRKGECQMTGKGRHGECANF
VRLIEPWNRTHLYTCGTGAYKPICTFINRGWRAEDYLFRLVPGYVDSGKGKCSYDPNQEN
VAALINGNLYAGVPVDFMSTDPGIFRTMGSRPAVRSEQYDSKWLNEPVFVHMKQIPDSSE
KNDDKLYFFFREKSLDSGGGASPSVLARVGRVCLNDEGGQKSLVNKWTTFLKARLVCSVM
GDDGVETFFDELRDVFIQLNQDERNPVVYGVFSTSGSVFKGSAVCVYSMADIRNVFNGPF
AHKHGHNYQWTTYTGKIPYPRPGTCPGGTFTPGLKSTKEFSDEAVNFIRAHPLMHHPVYP
IHKRPLVVRSGVDYRFTTIAVDQVDAVDGRYEVLFLGTDRGTVQKVIVLPKDPTTMEELT
LEEVEVFRTPAPVKTMHLSAKRQQLYASSEAGLTQMSLHRCGVYGKACSDCCLARDPYCA
WDGENCSAFTQATKRRSRRQDVKHGDPLRQCRGYNAKVERRLKEKIQFGVEGSSTFLECV
PRSPQATIKWLYQKEGRRKVLNRDGEVLKTPQGVLLKALTKADAGQYHCLATENNFKHTL
ARVSLRILDRDIAVALTTPDEEEEASRSHHKNHQQDAPPTPALLLEPEMRLIQQYCQSYW
EQLTAGGNSQADLPKRTNRRHTEALKASGE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggtctaaccatgagagttatggaaacaagactcctcctgttgctgtgggctttgttt
gtgtttgaagtggcctgcacacatcgctccgctcccagagtgcacctggcttttaaagag
ctgatggatactcggacagcaaggccgttcagtttctccttcaacaccagtgactaccgg
atcttgcacgttgacccagaccaggggcggttgtacctgggcagccgtgaatatctggtc
tctctagacatgcaaaacatcaacaaagagcctctcattatccactggccggctccagct
cagagaaagggagagtgtcagatgactgggaaaggcaggcatggagagtgtgctaacttt
gtgcgtctgattgagccgtggaacaggactcacctgtacacctgcggcacaggagcttat
aaacccatctgtactttcatcaacagaggctggagagctgaggactacctcttcaggctg
gttcctggttatgtggactctggaaagggaaaatgttcttacgatccaaaccaggagaat
gttgcagccctgataaatggaaacctgtatgctggagtgccggtggacttcatgagcact
gatccaggaatcttcaggaccatggggagccggccagctgtgagatcagagcagtatgac
tctaagtggctgaacgaacctgtatttgttcacatgaaacagattcctgacagctcagaa
aagaacgatgacaagctttatttcttcttccgtgagaagagtctggactcgggtggagga
gcgagtccaagtgttttagccagagtgggccgtgtgtgcctgaatgatgagggaggacag
aagtctcttgtgaacaaatggacgacttttctgaaggccaggctggtgtgctctgtgatg
ggagatgatggggtggaaaccttctttgatgaactgagggatgtgtttatccaacttaac
caggatgaacgaaaccctgtagtatatggcgtcttctcaacttctggctctgtgtttaaa
ggctcagccgtgtgtgtctactcaatggctgacatccgaaatgtcttcaatggccctttc
gcccataaacacggacacaactaccaatggactacatacacagggaagattccctatcca
cgtccaggaacgtgtccgggaggcacattcacaccgggtcttaagtccacaaaagagttc
tcagatgaagcagttaacttcatacgtgctcatcctctcatgcaccaccctgtgtatccc
attcacaagcgccctctggtggtgcgctctggtgtagactatcgctttactactattgcg
gtggaccaggtggatgctgtggatggccgatatgaggttctctttctgggaacagatcgt
ggtacggttcaaaaagttatagtcctgcccaaggatcccaccacaatggaagagctcact
ttagaggaagtggaagtttttaggacacctgctcctgtcaaaacaatgcacctatcagcc
aaaaggcaacagctgtacgcatcttcagaggcaggacttacccagatgtctttgcaccgc
tgtggagtgtatggaaaggcctgttcggactgctgtctggccagagacccctactgcgcc
tgggatggagaaaactgctccgcctttacacaagccaccaaaaggaggagcagaaggcag
gatgttaaacatggtgaccctttgcgtcagtgccggggctacaatgccaaagtggagagg
agactgaaggagaaaattcagttcggagtggagggtagcagcacatttctggagtgcgtg
ccgcgctctcctcaggccactatcaaatggctctaccagaaggagggaagacgaaaagtg
ctgaatcgtgacggggaggttcttaagactcctcagggggtccttctgaaagctctcacc
aaagcagatgcaggccagtaccattgcctggccacagaaaataacttcaaacacacgctg
gctcgtgtctctttacggatcctggatcgggacatcgctgtagccctcaccacccccgat
gaggaggaagaggcttcaaggagccatcacaaaaaccatcaacaggatgcacctcctacc
ccagcgctcctgctggagcctgaaatgcgtctgattcagcagtactgccagtcctactgg
gagcagctgaccgctggggggaactctcaggctgacctccctaaacgcacaaatcgcaga
cacacagaagcactgaaggctagtggggagtga
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