Ctenopharyngodon idella (grass carp): 127517475
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Entry
127517475 CDS
T08802
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb isoform X1
KO
K06840
semaphorin 3
Organism
cide
Ctenopharyngodon idella (grass carp)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
ig
PSI
Ig_3
Ig_2
I-set
V-set
DUF7024
Motif
Other DBs
NCBI-GeneID:
127517475
NCBI-ProteinID:
XP_051759156
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Position
8:21727756..21768046
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AA seq
752 aa
AA seq
DB search
MNMMQTLLLILSLCVWGCHGNARTTPRVHLSYKELLETKTIRPFSFSFNTSDYRILHMDQ
DQGRLYLGSCEYLVSLDMQNVNKEPLIIHWPATAQRKGECKLTGKGGQGECANFVRLIEP
WNRTHLYTCGTGAYKPICTFINRGWRAEEYLFRLVPGYVDSGKGKSPYDPRQENAAALIN
GNLYAGVHVDFMGTDPAIFRTLGDRPAVRTEQYDSRWLNEPVFIKIQKIPDSAEKNDDKL
YFFFREKSLDASGGSAPSVLARVGRVCLNDDGGQRSLVNKWTTFLKARLVCSVIGADGVE
TYFDELRDVFIQRTHDERNPIVYAVFSTAGSVFKGSAVCVYSMADIRNVFNGPFSHKHGH
NYQWTPYTGKIPYPRPGTCPGGTFTPDLHTTKAFSDEAVNFVRAHPLMYQPIYPIHKRPL
VVRTGVDYRFTTIAVDLVDAVDGRYEVLFLGTDRGTVQKVIVLPKDISTTEELILEEVEV
FKTPAAVKTLKISSKRQQLYVSSERGLTQVSLHRCAVYGKACSDCCLARDPYCAWDGEHC
SAFTPATKRRSRRQDIKHGDPLRQCRGFNAKVEKRLRETVQFGVEGSSTFLECQPRSPQA
TVKWLYQKDGKRKALNRDKEVLKTGHGILLKSLTQSDAGLYHCLATENNFKHTVARISLR
ILDREIVEALTESDVSVEPEHHRHHSHHHLPPPPPPPQSNPPPLQLHPQPEVRLINQYCQ
SYRQQIQSPPHKAKRNNRRHTGEQEEEELQEQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatgcaaaccctgcttctcatcctgagcttgtgtgtctggggttgtcatggc
aatgcccgcacaacaccccgagtgcacctgtcatataaagagttactggagacaaaaacc
atacggccgttcagtttctccttcaacaccagtgactaccgaattctgcacatggaccaa
gaccaaggccggctctacctgggcagctgtgaatatctggtctctctagacatgcaaaat
gtcaataaagaaccccttattattcactggccagcaacggcgcaaagaaaaggggagtgt
aaattaactggcaaaggtggacagggagagtgtgctaactttgtgcgtctgattgagcca
tggaacaggactcacctgtacacctgtggcacaggagcgtataaacccatctgcaccttc
atcaacagaggctggagagctgaggaatacctcttccggcttgttcctgggtatgtggac
tctggaaaaggaaagtctccttatgatccccggcaggagaatgcagcagctctgatcaat
gggaacctgtatgctggagtacatgtggactttatgggtacagatccagccatcttcaga
accttgggagaccgtcccgctgtcagaaccgagcagtatgactcccgatggctgaacgag
ccagtgtttataaaaatccagaagattccagacagtgcggagaagaatgatgataagctt
tacttcttctttcgggagaagagcttagatgcttcggggggcagcgctccaagcgtcctc
gcgagagtaggccgagtctgtctgaatgatgatggaggtcaaaggtcattggtgaataag
tggacgacgttcctcaaagcacgactggtctgttctgtgattggtgcagacggtgttgag
acctactttgatgaactcagggacgttttcatccagaggacccatgatgaacggaacccc
atcgtgtatgctgtgttctccacagctggctctgtgtttaaaggctctgctgtgtgtgtg
tactcaatggctgacatcagaaatgtcttcaatggaccgttctctcacaaacatggtcac
aactatcagtggacaccctacactggcaaaatcccttaccctcgcccggggacttgtcct
ggaggaaccttcacccctgatctccacaccactaaagccttctctgatgaggctgtaaac
tttgtgcgtgcccatccgctgatgtatcaacctatatatccaatacacaagcgccccctg
gtggtcaggactggagttgattaccgtttcaccaccattgctgtggacctggtggatgct
gtggatggaagatacgaggtgctcttcctgggcacagatcgtggaacagtccaaaaagtg
attgtcttaccaaaagacatcagcacaacagaagagctcattctggaagaggttgaggtt
tttaagactccagcagctgtcaaaactctgaagatttcttctaaaaggcaacagttgtac
gtgtcctcagaaaggggtcttacccaggtttccctgcacaggtgtgccgtttatggcaag
gcctgttcagactgctgcctggcccgagacccttactgtgcctgggatggagaacactgc
tctgctttcaccccggctaccaagaggagaagcagaaggcaagatatcaaacacggagat
cccttaaggcagtgcagaggattcaacgctaaagtagagaagcgtctgagggagacggtg
cagtttggggttgagggcagcagcactttcctggagtgccagccgcggtccccacaggcc
accgtcaaatggctctaccagaaggatggcaagcgaaaagcactcaatcgagacaaagag
gtcttgaagaccgggcatggcatcctgctgaaatctctcacccaatcggatgccggcctt
tatcactgcctggcaaccgagaacaacttcaaacacaccgtagcacgcatctccctacgg
attctggaccgggagattgtggaggcgttgaccgagtcggatgtctctgtagaaccagag
caccaccgccaccattcccatcaccaccttccacccccaccccctcccccacagtccaac
ccacctcctctccagctccaccctcagcctgaagtgcgtctcatcaaccagtactgccag
tcctacaggcagcagatacaaagcccaccacacaaagccaaacgcaacaaccgcaggcac
acaggagaacaggaagaggaggagctacaggagcagtga
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