Ctenopharyngodon idella (grass carp): 127517543
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Entry
127517543 CDS
T08802
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127517543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127517543
Membrane trafficking [BR:
cide04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127517543
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Erf4
Motif
Other DBs
NCBI-GeneID:
127517543
NCBI-ProteinID:
XP_051759273
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All DBs
Position
8:8034990..8060170
Genome browser
AA seq
1217 aa
AA seq
DB search
MSLGDQQWYPTSVQVTVLKARNLRIKGKNGTNDAYAIMQVGKDKFSTSVAEKCVSPEWKE
EATFDLPLVHQGNAERCTLYIIAMHRALVGLDKFLGQAVINLVDLHANRSRKKTDWYKLV
DKNGKQEKDRGEVLLDIHFMRNNMTASMFDLSMTDKPRSGISKLKDKIRGKKKDGLSDSA
SAIVPSSVGTDSEGEEEGSSDSPKKKSKLKSFFGSKTNLQRNVSQSMSTLGTLPEKNSSL
SSSRSSGLNVDSPDVKKKFKILGHKRTDSSDSKVSLGPFSLLNRSKQNIPAQNNLCINGG
HVYAEEQEPKAAFGSTLSLNSSGKGSVEDVRKYHQRNTSDISIDSLKGLSIPSYKPEVQD
KTSLVPQSHLEDRSLSSLERRVEVVEEERGRKPEVRSLQEMLNRQEEQELKKQQERERKQ
EEERKSRLEEQEKKRKEEEELQKKRREEEAQRAEEQRHQEESRVTERLSSLFGIGRKKEE
KREEAMNEPKRLDEPSSTNPFEDIPLTPDTPASVPEERSTDSRRGVRSTLTPTPPASVFP
SRTAKVSAVKPRLALNVLPETDNSHSQSPSDSVDTQSTIHASPLSPPLSTKSFESFGMFS
DLHTSLAPPKPQRTFIESSESSMENLSAPKSDKKRKAPLPPGNHEGSSKTESHPDNGGQM
HTQNSKSSQRPALPLPDYETLFPKKRHGVMSQTRWDHIIAEVNQRNWDFSEEMNVDGPER
PMSNKSAVFKDRTSANLNQHQRNHEAPPPAPVRHKEAIMPPKAPATPELSFEPNFQHGHE
PLYATVNKPEKSKNMENKPPPAVHSRHIPQEMERNTLTPDAITYQLSQSKEKPTPAARAI
QNVNSKTDDAAKQVPSVKPRQQSLVKDPVKQVQPDKQVTAQPMTSENNKVEKLHKGQNEN
ISTDVFVETDYFKTAEIPEELHLGKLTNEPEGKGMTAFDPFPSDNLISKDPWALPQQTTN
EVDLFTRGPKKMGNIVDQASTIDKKDAFANKGKTDPFTNLSEYGTAPKLERGKQSPSFTE
QARASFQRNFSLKKKRQYTTTGKVGTENGSLGRSVSQSSQDAEDVELTVTSVASASRTEP
TLVTSESPIGGKTALRAWVSPSEAQPVGSGSAVSNSRRPHPVKPMSTTESQSSSVLAVGK
DPKIITIKEMAEKPKIGESAPYTQLTQEELITLVVKQQVELSKKDARILELEDYIDNLLV
RVIEEKPAILLSLNSKC
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgggtgaccagcagtggtatcccaccagtgttcaggtgacggtgctcaaagca
cgaaacctgcggatcaagggcaaaaatggaacgaacgacgcatatgccatcatgcaggtg
ggcaaggacaagttttccacgtccgtagcggagaaatgcgtctcgcctgaatggaaggaa
gaagcgacgttcgatctgccgctggtccatcaggggaacgcggagcgatgcacgctttac
atcatcgctatgcaccgagccctggtgggactggacaagtttttggggcaggctgtcatc
aacttagtggatctccacgccaacagatcacgcaaaaagaccgattggtacaagctggtg
gataagaatgggaaacaagagaaagacagaggggaagttcttttggacattcatttcatg
aggaataacatgacagccagcatgtttgacctctctatgacagacaagcctcgctccggc
atctccaagctcaaggataaaatccgtggtaagaagaaagacggcctgtcggattctgcc
tctgcgatcgtgccctcctcagtgggaacagacagtgaaggggaagaagagggcagttca
gactctcctaagaagaaatctaaactgaaatccttttttggatcaaaaacaaacctccaa
aggaatgtgtcccagtccatgtcaaccctgggcaccctgcctgagaagaacagttcactc
agcagcagcagatcatccggccttaatgtggactctcctgatgtgaaaaagaagtttaaa
attctgggacacaagcgcactgacagctcagatagcaaagtgtctcttggccccttttca
cttctgaaccgctctaaacaaaacataccggcgcagaataacctctgtatcaacggcggc
cacgtttatgcagaggaacaagaacctaaagctgcttttggctccacactcagtctgaac
agctcaggaaagggttcagtagaggatgttcgtaaataccatcaacgaaatacttccgat
atctccatcgactcattgaaaggcctaagcatcccctcatacaagcctgaagtgcaagac
aaaacttctcttgtcccacagagccatctagaggacaggagcctcagctcgctggagcgt
cgtgtagaggtggtggaggaggagaggggaaggaaacccgaagtaagaagccttcaagag
atgctgaatcgacaggaagagcaagagttgaagaagcagcaagaacgagagagaaaacaa
gaggaagagaggaaaagcagacttgaagagcaggagaagaagcgcaaggaagaggaagag
ctgcagaagaagcgccgcgaggaggaggcgcagcgagccgaggagcagcggcatcaggag
gagagcagagtaactgaacgcctctcctctctctttggcattggaaggaagaaggaggaa
aagagagaggaagcaatgaatgaacccaagcgtctggatgagccctcctccacaaacccc
tttgaagacattcccctcacaccggatactccagcctctgtcccagaagagagatccacg
gactcacggaggggcgttaggagcaccctcaccccaacaccacccgctagtgttttcccc
agtcgcactgcaaaagtgtctgccgtcaagccaagattggctctgaatgtactgcctgaa
accgataatagccattcccaatccccttcagactctgtagacacccagagcactatccac
gcttctccactttccccacccctctctactaaatcatttgagtcttttggtatgttttct
gatcttcatacttctttggcacctcctaaacctcagagaactttcattgaatcaagtgag
tccagcatggaaaacctctcagctcccaaatctgataagaagcgaaaggctcctctaccc
cctggtaatcatgagggctcgtccaagactgaaagccatcctgataatgggggacaaatg
catacacagaactccaaaagtagtcaaaggcctgctcttcctctgccagactatgaaact
ctctttcccaagaaaaggcatggggtgatgagtcagacacgttgggaccatattattgca
gaggtaaaccagaggaactgggatttctctgaagagatgaatgtagatggaccggagaga
ccgatgtcaaataaatctgcggtctttaaagacagaacctcagcaaaccttaaccagcac
caaaggaatcatgaggcacctccccctgcccctgtgaggcacaaagaagcaatcatgccc
cccaaagcccctgcaacaccagaactatcattcgagcctaatttccaacatggtcatgag
cctttatatgctacggtcaataagcctgaaaaatccaagaacatggaaaataagccacct
cccgctgtccatagtagacatatacctcaggagatggaaaggaatactctgactcctgat
gccattacctatcaactctcccagtcaaaagagaagcctacaccagctgccagagccata
caaaatgttaattcaaagactgatgatgcagctaaacaggtgccttcagtaaaaccaaga
caacagtcattagtaaaggacccagtcaaacaagtccaaccagacaagcaggtaaccgct
caacccatgacatcagaaaacaacaaagttgagaaactacacaagggccagaatgaaaac
atttctacagatgtgtttgttgagacagactactttaaaactgctgaaattccagaagaa
ctgcatttggggaaactgactaatgaacctgaggggaaaggaatgactgcttttgaccca
ttcccaagtgataacctaatatctaaagatccctgggctttaccacagcagaccacaaat
gaagttgacctgttcacaaggggcccaaagaaaatgggaaatattgtagatcaggcgtcg
accattgataaaaaagatgcatttgcaaacaaagggaaaaccgatccattcacaaatctt
tctgaatacggcacagcaccgaaactagagcgcggaaaacaatctcccagctttactgaa
caagccagagcttcatttcaaagaaatttttcacttaaaaagaaacgccagtacacaacg
actgggaaagttggtacagagaatggtagtctgggtagatcagtttctcaatcttcacaa
gatgctgaagatgttgagctgactgtaactagtgttgcttcagcaagcagaactgaaccc
accctagtaacatctgaatcccctattgggggcaagactgctcttcgtgcttgggtctcg
ccatcagaggctcagccagttggtagtggaagtgctgtttctaattcaagaaggccccac
ccagtgaaacccatgagcaccaccgagagccagtcttccagtgttcttgctgtggggaaa
gacccaaagattatcaccatcaaggaaatggctgagaagccaaaaattggagagagcgct
ccgtacacccagctcacacaggaggaactgatcacactggtggtaaagcaacaggttgaa
ctatccaaaaaagatgccaggatcctcgagttagaggactacattgataacctgctagta
cgcgtcattgaggaaaaaccggccatcctgctttcacttaattccaagtgttag
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