Ctenopharyngodon idella (grass carp): 127517608
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Entry
127517608 CDS
T08802
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127517608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127517608
Enzymes [BR:
cide01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
127517608
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127517608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
MycE_N
Motif
Other DBs
NCBI-GeneID:
127517608
NCBI-ProteinID:
XP_051759450
LinkDB
All DBs
Position
8:complement(6189323..6205930)
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AA seq
396 aa
AA seq
DB search
MSQHALLSAGCKAWRSITCPRSELRLDLTLGCGQTFRWRETADGHWTGVMRGKVWTLTQT
EDMLWYYVYSHQKNPGTQKSQKQKVEEKEQLLVKRSKRMSDMKQEEVGMCTVMSETDNKE
EDLLRDYFQLDVKLGDLYRNWSTADPHFKHTANIFTGVRLLRQDPVECLFSFICSSNNHI
SRIQGMVDRLCQTLGTLLCKLDDVAYHDFPPLQDLTDPSVEMRLRDLGFGYRARFLQQSS
QTIVNSHGPDWLHSLRSAPYLQTRDALRTLPGVGLKVADCVCLMSLDKFEALPVDTHVWQ
IAKRDYNFAAGNSQKTLTDRVYKEIGDFFRKLWGPYAGWAQSVLFCADLKKFQKLREEIP
VMKDEKTELKNKMKKRRHDGYKQEQKREKGNKHQRS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcatgctctgctctctgcgggctgtaaggcatggcggtcaatcacatgtcca
cggtcagagcttcgtctggatctcactctgggatgtggtcagaccttccgatggcgcgag
actgcagatggtcactggacgggagtaatgcgggggaaagtgtggacactaactcaaaca
gaggatatgttatggtactatgtttacagtcatcaaaaaaatcctggaacacaaaaaagt
cagaaacaaaaagtggaagagaaggagcagttattggtgaagaggtcaaaaagaatgagt
gacatgaagcaggaagaggtgggaatgtgcacagttatgtcagaaactgacaacaaagag
gaggatcttctgagggactatttccagttagatgttaaattaggggatctctacaggaac
tggagcaccgcggatccacactttaaacatacagcaaacatcttcacaggagtgcgtttg
ttgcgtcaagatcctgtggagtgtcttttctcattcatctgcagctctaataatcacatc
tcgcggattcagggtatggttgacagactgtgtcagacactcgggactctcctctgcaag
cttgatgatgtggcctatcatgatttcccccctctgcaagatcttacagaccctagtgtg
gagatgcgtttgcgtgacttgggttttggctaccgtgctcgttttctgcagcagagctca
caaaccattgtgaactctcatggccctgactggctccattcactccgcagcgctccctac
ctgcagaccagagatgcactgagaactcttcctggagttggtctcaaagtggctgactgt
gtatgtctgatgtcactggacaagtttgaggcgcttcctgtggacacacatgtgtggcag
atcgccaaacgtgactacaactttgcagccggtaacagccagaagaccttgactgataga
gtctacaaagagattggtgacttctttagaaaactctggggtccctatgccggctgggca
cagtctgtacttttctgtgctgatcttaagaagtttcagaagctgagagaagagattcct
gtaatgaaagatgagaaaactgagctgaagaacaagatgaaaaagagaagacatgacgga
tataaacaagaacagaaaagagaaaaaggcaataagcatcagaggtcataa
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