Ctenopharyngodon idella (grass carp): 127517618
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Entry
127517618 CDS
T08802
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127517618
03019 Messenger RNA biogenesis [BR:
cide03019
]
127517618
03041 Spliceosome [BR:
cide03041
]
127517618
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
127517618
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127517618
mRNA cycle factors
Common to processing body (P body) and stress granule
127517618
Spliceosome [BR:
cide03041
]
Common components
Common spliceosomal components
General mRNP proteins
127517618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
127517618
NCBI-ProteinID:
XP_051759477
LinkDB
All DBs
Position
8:5491912..5499816
Genome browser
AA seq
314 aa
AA seq
DB search
MSSEAETQQPPQPAADVESPSSPAAAATAGDKKVIATKVLGTVKWFNVRNGYGFINRNDT
KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA
DRNRYRRYPRRRAPPRDYQENYQSDGEGEVREKREGGENAPEGEMQQQQRRPTYPGRRRY
PPYFVRRRYGRRPPYSNTPQRGDMTEGGEVDESQGGPDQGNKPMRQNYYRGFRPRFRPRG
PPRPRPVREGEEDKENQSESGQNQEPRQRRYRRNFNYRRRRPQTTKPQDGKDSKAADASA
DKSAAPEAEQGGAD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgaaacacagcagccgccgcagcctgccgccgacgtggagagcccg
tccagcccggcagccgcagctaccgcgggggataagaaggtcatcgcaacaaaagtcctg
gggacagttaaatggttcaatgtaaggaatggctacggtttcatcaacaggaatgacaca
aaggaagatgtctttgttcaccagaccgccattaagaagaacaacccaaggaaatatctt
cgtagcgttggggatggagagactgtggagtttgacgtcgtagaaggggagaagggtgcc
gaggcagccaatgttaccggcccgggtggcgtccctgtgcagggtagcaagtatgcggct
gacaggaaccgatacaggcggtacccacgcaggagggccccccctcgcgactaccaggag
aactatcagagtgatggtgagggagaggtacgggagaagagagaagggggagaaaacgcc
cccgagggtgagatgcagcaacagcagcgtagacccacctaccccggcagacggcgctac
ccaccatactttgtgcggagacgttatggcagacgccctccctactccaacacaccccag
agaggggacatgacagagggtggggaagttgatgagagccaaggtggtccagaccaaggc
aacaaaccaatgaggcagaactactacagaggcttccgaccaaggttcagaccaaggggt
cccccacgtccccggccagtgcgggaaggggaggaggataaggagaaccagagtgagagt
ggccagaaccaggaaccccgtcagcgccgctaccgccgcaacttcaactaccgccgcaga
cggccccagacaaccaagcctcaggacggcaaggacagcaaggcagccgatgcatcagcc
gacaaatcagccgctcccgaagccgaacagggcggagcagattaa
DBGET
integrated database retrieval system
