Ctenopharyngodon idella (grass carp): 127517632
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Entry
127517632 CDS
T08802
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04382
Cornified envelope formation
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04518
Integrin signaling
cide04810
Regulation of actin cytoskeleton
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127517632
04518 Integrin signaling
127517632
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127517632
09142 Cell motility
04820 Cytoskeleton in muscle cells
127517632
04810 Regulation of actin cytoskeleton
127517632
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127517632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127517632
04515 Cell adhesion molecules [BR:
cide04515
]
127517632
04090 CD molecules [BR:
cide04090
]
127517632
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127517632
Exosomal proteins of bladder cancer cells
127517632
Cell adhesion molecules [BR:
cide04515
]
Integrins
Integrin beta subunits
127517632
CD molecules [BR:
cide04090
]
Proteins
127517632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
EGF_2
I-EGF_1
PSI_integrin
EGF_Teneurin
EGF_integrin
Fn3_VIN3
EGF_TEN
vWA_SIBA-E
SEA
Motif
Other DBs
NCBI-GeneID:
127517632
NCBI-ProteinID:
XP_051759497
LinkDB
All DBs
Position
8:complement(27321307..27355691)
Genome browser
AA seq
1921 aa
AA seq
DB search
MGGWALRLAVGIYVLMLTVTAGHANEVNHCNAARAKTCSECIQIGKGCAYCPDEIFEHER
CDLKGNLEALKCSRMVTAESSRKIEQNVEINQSLKYSQVAPQLMHMTFLPGEEKEVEMEV
FEPGRGPLDLYILMDFSNSMSDDLDNLKKMGKELADLVGDLSDDYTIGFGKFVDKVTEPQ
TDMRPAKLAEPWSNSDPPFSFRNVITLTNDTDSFRQKLQRERISGNLDAPEGGFDAILQT
AVCQEQIGWRQHSTHLLVFSTESAFHYEADGANVLAGILNRNDEQCHLTSDGKYTHDIHQ
DYPSIPTLVRLLVKHNIIPIFAITNHSYTYYEKLHEYFPIAELGQLQEDSSNILSILRKA
FENIRSKISIRAEDRPKAVEAKISQSGTFSEYGNFKITPGEIGKFTVRLKALTQVGEVPV
CKTNPADRAGTLRIKPTTFSSALKVNAEVLCLTCDCEKTPVKNAVRCNGHGDLVCGKCQC
YEGWLGPFCNCSAGASTDSAMCIAPGKTELCSGRGDCMCGTCVCYNPNQFEGPFCQFDKS
QCQRFGGFLCNERGSCSMGRCVCTPGWSGDACECPISEDSCRDSKGGICNGLGECKCGRC
ECKHSGLPLSPTCEANFQQQLGMCEGKRSCVQCQAWNTGERKGRQCDNCPFKIIMVEELE
EKDKNVIETCSFRDEDDDCTYHYTVNYPLNMTDKEHRVLVKKKKDCPPAGFLWLIPLIMF
LMLLLGLLLLCCWKYCSCCQACLALLPCCGRGRMVGFKEDHYMLRQSLLTSDHLDTPMVR
TGPPKSTDIVRWKVTDNVHRGPNHPQNQMKPNPNETIQYPVSLRLNRQYSETLSHLESRD
TDVLRREVEDNLNDVFLQIPGAQRVQKTRFRTQRNSGKRQNNTIVDTVLTAPRASYPDIV
KLTDKQVQAGNFRDLKVVPGYYTVANDREAAGAVEFQEGVESVDVRVPLFIKDEDDEKKE
LLVQAVDVPVGIAKIGKDHVNITVIKEHARSIFTFLQPSYTYSRQDGVANIPISREIIED
GRTQVTYCTRDLTAKDKKDYISVDGDMSYGPGETQKTVPVKLLELGEGDSLLEDKQVKQF
VMDLSNPRQGAKLGRYPRTTITIADKPEPSIVMFKKSTQTYNTADPLYTIPVVRTRNQES
PATVYCRTNKASRFDISSPLKFAPGETEKNFVIDPRAYPSPIIPETFQLELFDPSNNAIV
GERKTTLVNVIDGRGDGKIQDVQKLEMANQVATSPGGRLYSPTNIKAVATGPKNIRLNWN
SSPKASGYKVKYWIYGNPEADAQVLDVKSPQAELTNLYPYCDYEMRVCGYNALGEGNYSD
IIQCQTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITSYEVIYIPIDEGKKPTGP
SKKVMIDSPKKRMLLIENLQPSQTYCYKVRARNKVGWGPYREATINLAAQPTRPMSIPII
PDIPIVDAEAGDEYDSYLMYSNEVLRSPTSSQRPSVTDLTEDQFVNGKWDQNFLFPGGSS
SLSRNVSSSSSTYSHSTPRPAATNHSSTTTYISGKGGLTTHTCIHDEVTLRKRSENRHYT
DGDGVRDSIVMGNLSGGFLDSLGVSSFSQSTTTSYNLSSRARTQSEDINDALQNLDSVLQ
DSRFNPGVPETPSRLVFSALGPTALKVSWQEPNCETDVLGYCVLYQLINGGEVKRIEVNS
PAQNSVVVQDLLPNHSYIFKVKAQSREGWGPEREGVITIESAVDPKSPLSPMPGSPFTLS
TPSAPGPLIFSALSPDTLQLSWEKPRKPNGDILGYVVTCEQLHGGGDLRSFQVNSNAATS
LTVSDLKENMPYKFKVQAQTTQGFGPEREGIITIESQDGGSMSQYSSQSVTKREVFNLPT
EISSHTMFSEPFVSSDGMMMMSSRQVTESGGSVTRQVEMVQRGVVSSSTVTKRLERQYFE
A
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgggaggatgggcgctgcgtctcgctgtggggatctacgttctcatgctcactgtgaca
gccggccatgctaatgaggtgaaccactgtaacgctgccagggccaaaacctgctcagaa
tgtatccagatcggcaaaggatgtgcatactgccccgatgagatcttcgagcatgagcgt
tgtgacctgaagggaaacttggaggcacttaaatgtagtcggatggtaacagctgagagc
agcaggaaaattgaacagaatgtggaaatcaatcagtcactaaagtactctcaggtggcc
cctcagctaatgcacatgacgtttctccccggggaagagaaggaggtggagatggaagtg
tttgaaccaggccgtggccctctggacctctacatcctcatggacttctcgaactctatg
tctgacgatttggacaacctgaagaaaatgggaaaagagctggctgatcttgttggcgat
ctctctgatgattacaccatcggatttggcaagtttgtggacaaagtcaccgagcctcag
acagacatgaggccagccaaattagctgagccgtggtccaacagtgaccctccgttttca
ttccgtaatgtcatcactctcaccaacgacaccgactccttcagacagaagctccagcga
gagcgcatatctggcaacctggacgcccctgaggggggttttgatgccatcttacagact
gctgtctgccaggaacagattggctggaggcaacacagcacccacttgcttgtcttctcc
accgaatcggctttccattatgaggcagacggtgccaacgtgcttgcgggcatcttgaac
cgtaacgatgagcaatgccatctgacttcagatgggaaatacacacacgacattcatcaa
gactacccatctatacccaccctagtgcgacttctggtgaaacataacatcatcccaatc
ttcgctattaccaaccactcctacacatactatgagaaactgcatgaatacttccctatt
gctgagctgggacagttacaagaagattcctccaacatcttgagcattttaagaaaagct
tttgagaatattcgttccaagatcagtatccgtgcagaggacagaccaaaggcggtggaa
gccaaaatctctcagtctggcactttttctgaatatggcaatttcaaaatcacaccagga
gaaattggtaaatttacagtccgtctgaaggctcttactcaggtgggagaggttcctgtg
tgtaagaccaacccagctgaccgggcgggaaccttgagaatcaaacccaccacctttagc
tccgcactcaaagtcaatgctgaagtgctctgtcttacatgtgactgcgaaaagaccccg
gttaaaaatgcggtgcgctgtaatggccatggagatcttgtctgtgggaaatgccagtgt
tatgaaggatggctaggccctttctgtaactgttcagcaggggcctccacagactctgcc
atgtgcatcgcacctgggaagacagagttgtgctcgggcagaggagactgcatgtgtggg
acctgtgtgtgctataacccaaaccagtttgaagggccattctgccagtttgacaaatct
cagtgtcagagatttggtggttttctctgtaatgagcgtggaagctgcagtatgggcaga
tgtgtgtgtacaccaggctggtctggagatgcctgtgaatgtcccatcagcgaagactct
tgtcgagacagcaaagggggcatctgcaatggccttggtgagtgtaaatgtggccgttgt
gagtgtaaacactctggacttccactgagcccgacttgtgaagcgaacttccagcaacaa
ctgggcatgtgtgaaggcaagaggagctgcgttcaatgccaggcctggaacaccggtgag
agaaaaggacggcaatgcgataattgcccctttaaaatcattatggtggaagagcttgaa
gaaaaagataaaaacgtgatagagacgtgcagttttcgtgatgaagatgacgactgcact
tatcactacactgtgaattatccattaaacatgacagacaaagaacacagagtcctagtg
aagaaaaagaaagactgtccacctgcaggtttcctgtggttgattcctctcattatgttt
ctgatgctattgcttggtttgcttttactctgctgctggaaatactgctcctgctgtcag
gcctgtcttgctcttctcccatgctgtggcagaggtcgtatggtgggattcaaagaagac
cactacatgctacgtcagtctttgttgacctccgatcatttggacaccccgatggtgcgc
accggcccacccaagagcacagacattgtgcgctggaaagtgacggacaatgttcatcga
ggaccaaaccacccccagaaccaaatgaaacccaaccccaatgagaccatccagtaccct
gtctctcttcgtctaaaccggcaatattccgaaactctttcccaccttgaatctcgggac
acagacgtgctcagacgagaagtagaggacaacctcaatgacgtgttcctgcagatccct
ggcgcacagagagtgcaaaagactcggttcaggacacaaagaaattctggaaagagacag
aacaacacaattgtggacacagttttaactgcccctcgggccagttacccagatattgtt
aaattgactgataaacaggttcaggctggaaacttccgggacctgaaggtggttccaggc
tactacaccgtagctaatgacagagaagcggcaggtgctgtggagtttcaggagggcgtg
gagtcagtggatgtccgggttcccctcttcatcaaagatgaggatgatgaaaagaaggag
ctgcttgtgcaagccgttgatgttccagtcggaattgcgaagattggcaaagatcatgtc
aacattacagtgattaaagagcatgctaggagcatctttaccttcctgcagccgtcatac
acctacagtcgtcaggatggtgtggcgaacatcccgatcagtcgtgagatcatagaggat
ggacggacacaggtcacatactgcacccgtgacctcactgccaaagacaagaaggactat
atctcagtcgatggagacatgagttatggaccaggggaaacacagaagaccgtcccagtg
aaactcttggagcttggggaaggagacagtctgctggaggacaaacaggtcaaacagttt
gtgatggatctgagtaacccacggcaaggtgctaaactcggccgttacccacgcaccacc
atcaccatcgccgataaaccagaacccagcatcgtgatgtttaagaagagtactcaaact
tacaatacagccgacccgctttacaccatccctgtggtacgcactcgaaaccaggagagt
ccggccactgtttactgtcgcacaaacaaagcctcgcgcttcgacatttccagtcctctc
aaatttgctcctggcgagacggaaaagaattttgtcattgatcctcgtgcgtatccatct
cccatcataccagagaccttccaactggaactattcgacccaagtaacaatgcaatcgtt
ggagagaggaagactacgctggtgaacgtcatcgatggtagaggagatgggaaaattcag
gatgtacagaaattggaaatggccaatcaggtagccacatctcctggaggacgcctctac
tccccaaccaacatcaaagctgtcgctaccggccctaaaaacatacgtctgaactggaac
tccagtccaaaagccagtggttacaaggtgaagtactggatatatggaaatcctgaggcc
gatgctcaggtgctggatgtgaaatctcctcaagccgagctgaccaatctttacccatac
tgcgattacgagatgcgcgtatgtggctacaatgcacttggagagggcaattacagtgat
atcatccaatgccagactctagaggatgttcctagtgaacctggtcgcttggctttcaat
gtcatcagccccactgtcactcaggtcagctgggcagagccagcagagacgaatggtgtc
atcacttcctatgaggtcatctacatacccatcgacgagggcaaaaagccgacaggacct
tctaagaaggtgatgattgacagtcccaaaaagcgcatgctgctcatcgagaacctgcag
ccttctcagacttattgttacaaagtgcgtgctcgcaataaggtgggctggggcccatac
agagaagccacaatcaacctggcagcacagcctaccagacccatgtcaattcccatcatt
cccgacattcccattgtggatgcagaagctggtgatgaatatgacagctatctgatgtac
agtaatgaagttctacgatccccaacaagtagccagaggcctagtgtcacagatctgact
gaagatcaatttgtaaatggaaagtgggaccagaatttcctgtttccaggaggaagcagc
tccctctcccgcaacgtcagctcctcctcatccacgtacagccattccacccctcgcccc
gctgcgaccaatcacagcagcaccacaacgtacatttccggcaaagggggcttaactaca
catacctgtatacatgatgaagtgaccctgaggaaacgatctgagaacaggcattacact
gacggtgatggtgtgagggattctatcgtcatgggaaacctgtctggaggatttttggac
agcttaggggtctctagcttcagccagagcacaactaccagctacaacttgagctccaga
gctcgtactcagtctgaagatatcaatgatgcactgcagaacctggatagtgttcttcag
gattctcgcttcaaccctggtgttcctgagactcccagcagactggtgttctctgccctg
gggcccacggccctgaaagtgagctggcaggagcccaactgtgagactgacgtactgggc
tactgcgtcctttaccagctaatcaatggaggtgaggtaaagcgtatcgaggtgaacagt
cccgctcagaactctgtggtggttcaggatctcctgcccaaccattcctacatcttcaaa
gtgaaggcccagagtcgggagggctggggtcctgagagagagggagtcattaccattgag
tctgccgtcgaccccaagagtccactgagcccaatgccagggtctccgttcactctcagc
actcccagcgctccaggacctttgatcttctcagctttgagtccagacacgctgcagctg
agctgggagaaaccccgcaaacccaatggggacatcctgggctacgtggttacctgcgaa
cagctgcacggtggaggagatcttcgctccttccaggtgaacagcaacgctgcgacttcg
ttgactgtgtctgacctgaaagaaaacatgccgtacaaattcaaagttcaagcccaaacc
acgcagggctttggaccggagagagagggcatcatcaccattgaatcccaagatggaggc
tccatgtcacagtacagcagtcagtcagtcacaaagagagaggtgtttaacctaccaaca
gagatttcttcacacaccatgttctcagaacccttcgtgtcttcagacggtatgatgatg
atgtcgagcaggcaagtcacggagtcgggcggctcggtcacacggcaggtggagatggtg
cagaggggagtcgtgtccagcagcaccgtcacaaagaggctggagaggcagtactttgag
gcctaa
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