KEGG   Ctenopharyngodon idella (grass carp): 127517702
Entry
127517702         CDS       T08802                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03082  ATP-dependent chromatin remodeling
cide03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127517702
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127517702
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cide01009]
    127517702
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cide03021]
    127517702
   03036 Chromosome and associated proteins [BR:cide03036]
    127517702
Protein phosphatases and associated proteins [BR:cide01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127517702
Transcription machinery [BR:cide03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     127517702
    SWI/SNF complex
     127517702
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    127517702
   PBAF complex
    127517702
   SWI/SNF complex
    127517702
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 127517702
NCBI-ProteinID: XP_051759651
LinkDB
Position
8:22678468..22685235
AA seq 376 aa
MFNMALSKTYGQKPIKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLSRRLATVEER
KKIVASSHDHGYTTLATSVTLLKASEVEEIFEGHDEKYKAVSISTEPPAYLREQKAKRNS
QWVPTLPNSSHHLDAVPCSTTINRNRLGRDKKRTFPLCFDDHDPAVIHENATQPEILVPI
RLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQQIESYP
TDSILDEQMDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVT
TIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQD
RNTRRMRRLANTAPAW
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgttcaacatggctctaagcaaaacatacggacaaaaacctattaaattccaactggaa
gaggatggagaattttacatgattggatcagaggtgggaaattacctgcgtatgttcaga
gggtctttatataagcgctacccgtcactttcaagaagattagcgacagtagaggagaga
aagaagatagtagcatcatctcacgatcacggttacaccactttagccaccagtgtgacg
ctgctgaaggcctcagaagtagaagagatatttgagggacatgacgagaagtacaaggct
gtgtcaatcagcactgaacctccagcttatctcagggagcagaaagccaagagaaacagt
cagtgggttcccactcttcccaacagttcccatcacttagacgctgtgccttgctccact
acgattaaccgcaaccgactgggccgtgacaaaaagaggactttccccctctgctttgat
gatcacgaccctgctgtcattcatgagaatgccacccagcctgagatcctggtgcccatc
cgactggacatggagattgacgggcagaaactgcgtgatgctttcacatggaacatgaat
gaaaagctaatgactccagagatgtttgctgaaatcctttgtgacgatctggacctgagc
ccactgacctttgttccagccattgcctcggccatcagacagcagatagagtcctacccc
acagacagcatactggatgagcagatggaccagagagtcatcatcaagttaaacatccat
gttgggaacatatctctggtggaccagtttgaatgggacatgtctgagaaggagaactct
cctgagaagtttgctctgaagctgtgctctgagctgggcctgggcggagagtttgtcacc
actatcgcatacagcatacgtggccagctcagctggcatcagaggacctacgctttcagt
gagaaccctctccccacggtggagattgccatccgaaacacaggcgatgctgaccagtgg
tgtccactgctggagacactgacagatgctgagatggagaaaaagatcagggaccaggac
agaaacacaaggcggatgagacgacttgcaaacacagccccagcatggtga

DBGET integrated database retrieval system