Ctenopharyngodon idella (grass carp): 127517720
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Entry
127517720 CDS
T08802
Name
(RefSeq) sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H isoform X1
KO
K06840
semaphorin 3
Organism
cide
Ctenopharyngodon idella (grass carp)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_2
ig
PSI
Ig_3
V-set
Motif
Other DBs
NCBI-GeneID:
127517720
NCBI-ProteinID:
XP_051759726
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Position
8:17451226..17475725
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AA seq
752 aa
AA seq
DB search
MRRMLALFCLISLAAPLTDAWRPSQPRLHFQHSELVKSGRLMSLSVPAGDLSSLLPDEDG
RRLYIGMKDHLLSTSLDDITQIPRKIHWPANPDRIQECIMAGKNLQMDCANFLRVLELYN
QTHLYACGTGAFNPRCAFIPTNLFLRAEEQTLPYEDTESGKGKCPYDPHQRTATAIVDGE
LYAGISSDFLSHDTAFIRSLGERHVIRTEQYHSTWLQGAEFVHVAAMSESDNEEDDKVYV
FFTERAQEAEGAAGKVLYSRVARVCKNDIGGQRSLVHKWSTFQKARIVCSVPGPDGIHTH
FDKLQDIFIQRGKDKMNPLIYGLFTTTSNVLNGSAVCVYRMQDIIRAFKGNFLHREGQQY
KWTEYTGRVPYPRPGTCPSKTYGGFKSTREYPDDVIFFSRTHPLMQELVHPHGGHPLLIR
VGVSYKLTRLLVDRVEAVDGQYDVLFIGTDSGLVLKAIHLPKSNGQNQEVTLEQLQVFKN
KSPITAMTMSKKKQWLFAGSAEGVVQLRLFHCDLYGQACAECCLARDPYCTWDGHSCSPY
MPTAHRRNIRQVIDDGNPLNQCVRQGAGLQVEAEEKTLVVAVGNSTYLECLPKSHHATVT
WYKDIGENSLEQHKVTSGEQLVVIDRGILIPRTELNHGGVYHCQLEEHQFRWTAVTIRLI
VWSPALQPFLGPAQPWYQDVMTLINHSKLERRCKELSQRHNNKESANHKHNKQDRKRADR
HRHRGGGEKEKGKGRKNRSRMQSSAQRLPRSA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggatgctggctctcttttgcttaatttcactggcggcacctctaacggacgca
tggagaccatcacaaccacgactgcacttccaacactcagagctggtgaagagcggcagg
ctcatgtctctctctgtgcctgctggggatctgagctctctgctgccggatgaagacggt
cgtcgcctttacattggtatgaaggaccatctgctgtcgaccagcctggatgatattact
caaatcccccgcaagatacactggcctgcaaatccagaccggatccaggaatgtataatg
gctggaaaaaacctgcagatggactgtgctaacttcctgcgtgtgttagagctttataac
caaacacatctttacgcatgtggaactggagcgttcaaccctcgctgtgccttcatccct
accaacctcttcctcagggccgaggagcaaacactgccgtatgaagacactgaatcaggg
aagggaaaatgtccgtacgaccctcaccagagaacagctaccgccatcgtagacggtgag
ctgtacgctggcatctcatctgactttctaagtcatgatacggcttttattcggagtctg
ggggagcgacatgtgattcgcactgaacaatatcactctacatggctgcaaggcgctgaa
tttgtacatgttgcagcgatgtcagagagtgataatgaggaggatgataaggtctacgtg
ttcttcactgagcgcgctcaggaggcagaaggggctgctgggaaggtcctctattctaga
gtcgcccgcgtctgtaagaatgatattggtggtcagcgtagtttggttcataaatggagc
accttccagaaagctcgtattgtttgctccgtaccgggacctgacggcatacacacacac
tttgacaaactccaggatatttttattcaacgtggtaaggacaaaatgaaccccctcatc
tatgggctcttcaccactaccagcaatgtcttgaatggatctgctgtgtgcgtgtaccgc
atgcaggacattattagagcttttaaaggaaacttccttcacagggagggacaacagtac
aagtggacagagtatacaggccgagttccctatcccagacctggcacatgtcccagcaag
acatacggaggctttaaatcaacgagggagtatcctgatgacgttatcttctttagccgc
acacatcctttaatgcaggagctggtgcatcctcatgggggtcatcctttgctgatcaga
gtgggcgtgtcttacaagctgacccgcctccttgtggacagagtggaggcggtagatgga
caatatgacgtgttgttcatcggcacagattctggcctggttctgaaagcgattcacctt
ccaaaatctaatggacaaaatcaggaggtcactctggaacagctgcaggtttttaagaac
aagtcaccaatcactgccatgacgatgtccaagaaaaagcagtggctgtttgctggatca
gcagagggtgtggttcagttgcgtctgttccactgtgatctgtacggccaggcctgcgct
gaatgctgtctagctagagacccgtactgcacttgggatgggcactcttgcagcccatac
atgccaactgcacacagaagaaatattcgtcaggttattgatgacggcaacccgctgaac
cagtgtgtcagacagggagctggtcttcaggtggaggcagaggagaagacactagttgtt
gctgtaggtaacagcacctacctagagtgtctacccaaatctcaccatgccaccgtcacc
tggtataaagacataggcgagaacagcttggagcaacataaggtcacatctggggagcag
ctggttgtcatcgacaggggaatcctcattccccggactgagctcaatcatggcggcgtt
tatcactgtcagctagaagagcatcagttccgctggacagctgttactattcgtttaatt
gtgtggagccctgccctgcagcccttccttggtcctgcccagccatggtaccaggatgtg
atgacactgatcaaccacagcaaactggagcgacgctgcaaagaactcagccaacgtcac
aacaacaaggaatcagcgaatcacaagcataacaaacaagacagaaagagagcagaccgg
cacaggcacagaggagggggggagaaggagaaagggaaggggcggaagaaccggagcaga
atgcagagttcagcacagaggctgccgaggagcgcatag
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integrated database retrieval system
