| Entry |
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| Name |
(RefSeq) RNA exonuclease 1 homolog isoform X1
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| KO |
| K14570 | RNA exonuclease [EC:3.1.-.-] |
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| Organism |
cide Ctenopharyngodon idella (grass carp)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:cide00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127517871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:cide03009]
127517871
Ribosome biogenesis [BR:cide03009]
Eukaryotic type
Pre-60S particles
RNases
127517871
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(23188864..23199403)
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| AA seq |
1225 aa
MLRSTGFFRGIDCPFYCENNNGKAGADGCSRPYCHFRHSKQRRAASGIYDIKKTKALSAS
PDDQGYDPFSPEVVRPEKHYNGEPPSTGQGVDLGTMELELVNRAIEAVRSEMEREKKKLS
RIGDQEYEPTTSSVKRPKPSASSHQGYDPGSYQMGQASEYTPSPRSSKYTLDSENSSNNA
SALEYVPTAVSKKSIKKVLPPPPSRVKCKYTLDNSKPSTDMEYDPLSNYSAKPTVKEQRT
LCSEGEGRKRFYPEKQGKDEEYVPTAKKPRSSPPKADVPKYTLSFSESDEESSGTEYRPT
SLSRLQRKGINIGLKQERESGLMGLQKKQVSKIDDGFSHSESDDVESQDVDRTNKKIDKK
ISVSQLKNIKSNKPKKEEKDSDKKSSKERLESSSVNKTSKNSSKKDKNQSKTVDGSSKSK
EKVRKDGTESKSNDEKNRKIVKIKSEHSQREKERGSGNIKKPKTDKPVKNDKVASKFKDQ
KNGKLESSAKEKDKKKSSHGSGSTNSSSTKDKSKKSSSIRDHKQARETKQRNLSHVDLFG
AESAEEDDEEDERIVRKSASAFKRGSLMNNKRKTSEDMSSSSEDDSEVDNDDGGGDEAVD
YSCLQDEMEYDSDPMEECLRIFNESKEVKTEDKGRQAKQPSREQEEEEEEETESTLTTLF
PGQKKRVSHFKAQGKSEASLNAVPMTQRRMTAQEICYQRMQKAQQQAAQLAAAVKTASAS
TNPILGLSGEKRRVAHRPTASLPSSKPGLANASSQVLSPTRVAIDQLSVKAQTSAGILSK
TTSTAMQKRVAHTPTLKSSAMKRPVIPAEFGAKVPTNVRQRYLNIFIDECLKLCSSEQEA
FQMALDEEKVVYDRSSSKNIYLNVAVNTLKKLRSKSTPTSPALKTPAVSVNRKAQSHEGV
LGGRLAATTSYTINRSGKQQDVDLKGAILYNKLKKYAMNEEQLQEHGYPRPHPEMSGHAV
VHNLPEKKSNDPFSKICSRCGAEYKINANGSCVRKEECSHHWGRLRRNRVPGGWETLYSC
CSGAVGSPGCEVCKQHVQDGRKESLDGFVKTFSKPLPVDGNAGVYALDCEMCYTKQGLEL
TRVTVINSDLKVVYDTFVKPGSKVVDYNTRFSGVTQDDLENTTITLRDVQAVLLSMFSAE
SILIGHSLESDLFALKLIHSVVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDSVGGH
DSSEDARACMELMIWKIKEDAKVKR |
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| NT seq |
3678 nt +upstreamnt +downstreamnt
atgttgagatctacggggttctttcgtgggattgactgcccgttttattgtgagaataac
aatgggaaagccggtgcagatgggtgcagcagaccctactgtcacttcagacacagcaaa
caaagacgagccgcctctgggatatacgacatcaaaaagactaaagcgctttctgcgagt
ccagacgatcaaggatatgatccattcagtccagaggttgtgagaccggaaaagcattat
aatggggagccaccatcgacgggtcagggtgtggacctgggcaccatggagttggagctg
gtcaatcgggccattgaggctgttcgcagcgagatggaaagggagaagaagaagctttct
cggattggagatcaggaatatgagcccaccacgagctctgttaagagaccaaagccctct
gcatcatcacatcagggctatgatcctgggagctatcagatgggccaagcaagtgaatac
accccgtcccctcgctccagcaaatacactttggactcagagaacagcagtaacaacgcc
agcgcgttggagtatgtgcccactgctgtctccaaaaaaagcattaaaaaggtgttacct
ccgccaccatcccgtgtcaagtgtaaatacactctggataattccaaaccatcaacggac
atggagtacgacccgctgtcgaactattcggctaagccgactgttaaagaacagagaact
ttgtgttcagagggagaagggagaaagagattttaccctgaaaaacaagggaaagatgag
gaatatgttccaacggcgaaaaaaccaaggtcgtcgccacctaaggcagatgtgccgaag
tacactctaagtttctctgaatccgacgaggaaagttctgggacagagtatcggccaacg
tccctaagccgcctgcagcgcaaggggatcaacatcggcttgaaacaggaacgagagtcg
ggtttgatgggactacaaaaaaagcaggtatctaaaatagacgatggcttctcacatagc
gaatctgatgatgtggagtcccaggatgtggacaggacaaacaaaaagatagataaaaag
atatctgtgagtcagttgaaaaatattaaatctaataagccaaaaaaagaggagaaagac
tccgataagaagagttcaaaagaaagactggaaagttcaagtgtcaacaagacgtcaaaa
aattcaagtaaaaaagacaagaaccaaagtaagactgtggatggaagcagtaagtccaag
gaaaaggtgcggaaagacggaactgagtcaaagagtaatgatgaaaagaacaggaagata
gttaagataaagagtgaacacagccaaagggaaaaagagagaggaagtggtaacatcaag
aaacccaaaacagacaaacctgtaaaaaacgataaggtggcatccaaattcaaagaccaa
aagaacggaaaacttgagagcagtgcaaaggagaaggacaaaaagaaaagcagccatggg
agcggcagtaccaacagcagtagcactaaagataaaagtaaaaaaagcagctcgatccgt
gatcacaaacaggcaagagaaaccaaacagaggaatctgagccacgtggacttgttcggt
gctgagagtgccgaagaggatgatgaggaagacgagaggatagtgaggaagtctgcttct
gcttttaaacggggaagcctcatgaataataagaggaaaacctctgaagatatgtcatca
tcgtcagaggatgattctgaagtggataacgatgatggcggtggtgatgaagcagtggac
tactcctgtctgcaggatgagatggagtatgactcagaccctatggaggagtgtctgcgg
atatttaatgaatccaaagaggtcaagacggaagacaaagggagacaagctaagcagcct
tcaagggaacaggaggaggaggaggaggaagaaacagaaagcactttaactactctcttt
cctggtcagaagaagagggtgtcacattttaaagctcaaggaaagtcagaggcgtcactg
aacgctgtgccgatgacacagcggaggatgacggcgcaggagatctgttaccagcgcatg
cagaaggcccagcagcaggcagcacagctggctgctgcagtaaagactgcgtctgcatcg
accaacccaatactggggctctctggagaaaaacgacgggtggcgcaccggccaactgcc
tccctgccctcctcaaagcctggattagctaatgccagcagtcaggtgttgtcgcccacc
agggtggcgatagatcagctttcagtcaaagctcaaacgtcggcaggcatcctgtcaaag
accacatccactgcaatgcagaagagagtggctcatacccccaccctgaagagctctgcc
atgaagcgtcctgtcattcctgctgaatttggggccaaggtgcccacaaatgtccgtcag
cgttaccttaacatattcattgatgagtgcctgaagctctgttcttctgaacaagaagcc
tttcagatggctctggatgaagagaaggtggtgtatgacaggagcagcagtaagaacatc
tatctgaatgtagctgtgaacacactgaagaagctccgcagcaagagcacacctacgtcc
cctgccctcaagaccccggctgtatctgtgaatagaaaggctcagtcccatgaaggagta
cttggtggacggcttgctgccacaaccagctacacaatcaaccgctccggcaaacagcag
gatgtggaccttaaaggtgccattctctataataaactgaaaaagtatgcaatgaatgaa
gaacagctgcaagagcatggctaccccagacctcaccccgagatgtcgggtcacgctgtc
gtccataaccttccagaaaagaaaagcaatgaccctttttccaaaatctgtagtcgatgt
ggtgccgagtacaagataaacgctaacggcagctgtgtgcgtaaggaggagtgcagtcac
cactggggaagattacgcagaaacagagttccaggaggttgggagaccctttacagctgc
tgctctggtgcagttggttctcctggatgtgaagtgtgtaaacaacatgtacaagatggc
cgtaaagagtccttggatggttttgtgaagacttttagcaaaccgttgccagtagatgga
aatgcaggtgtctacgccttggactgtgagatgtgctatacaaagcaaggtttggagctg
accagagtgaccgtcattaactctgacctcaaagttgtgtacgacacgtttgtcaagcca
gggagcaaagtggtggattacaacacacggttttcaggtgtgacacaggatgatctggag
aacaccaccatcacccttagagatgtgcaggcggtgctgctgagcatgttcagtgccgag
tccattctaattggacacagtcttgagagtgacctgtttgcgcttaagcttattcacagt
gtagtcgtggacaccgccattgtgtttcctcaccgcctgggtctgccttacaaacgtgcc
ctacgcaaccttatggccgactacctcaaacgcatcatacaagacagtgtgggggggcat
gactccagtgaggatgcccgggcctgcatggaactcatgatctggaagatcaaagaggat
gccaaggtgaagagatga |
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