Ctenopharyngodon idella (grass carp): 127517871
Help
Entry
127517871 CDS
T08802
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127517871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127517871
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
Pre-60S particles
RNases
127517871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
127517871
NCBI-ProteinID:
XP_051759983
LinkDB
All DBs
Position
8:complement(23188864..23199403)
Genome browser
AA seq
1225 aa
AA seq
DB search
MLRSTGFFRGIDCPFYCENNNGKAGADGCSRPYCHFRHSKQRRAASGIYDIKKTKALSAS
PDDQGYDPFSPEVVRPEKHYNGEPPSTGQGVDLGTMELELVNRAIEAVRSEMEREKKKLS
RIGDQEYEPTTSSVKRPKPSASSHQGYDPGSYQMGQASEYTPSPRSSKYTLDSENSSNNA
SALEYVPTAVSKKSIKKVLPPPPSRVKCKYTLDNSKPSTDMEYDPLSNYSAKPTVKEQRT
LCSEGEGRKRFYPEKQGKDEEYVPTAKKPRSSPPKADVPKYTLSFSESDEESSGTEYRPT
SLSRLQRKGINIGLKQERESGLMGLQKKQVSKIDDGFSHSESDDVESQDVDRTNKKIDKK
ISVSQLKNIKSNKPKKEEKDSDKKSSKERLESSSVNKTSKNSSKKDKNQSKTVDGSSKSK
EKVRKDGTESKSNDEKNRKIVKIKSEHSQREKERGSGNIKKPKTDKPVKNDKVASKFKDQ
KNGKLESSAKEKDKKKSSHGSGSTNSSSTKDKSKKSSSIRDHKQARETKQRNLSHVDLFG
AESAEEDDEEDERIVRKSASAFKRGSLMNNKRKTSEDMSSSSEDDSEVDNDDGGGDEAVD
YSCLQDEMEYDSDPMEECLRIFNESKEVKTEDKGRQAKQPSREQEEEEEEETESTLTTLF
PGQKKRVSHFKAQGKSEASLNAVPMTQRRMTAQEICYQRMQKAQQQAAQLAAAVKTASAS
TNPILGLSGEKRRVAHRPTASLPSSKPGLANASSQVLSPTRVAIDQLSVKAQTSAGILSK
TTSTAMQKRVAHTPTLKSSAMKRPVIPAEFGAKVPTNVRQRYLNIFIDECLKLCSSEQEA
FQMALDEEKVVYDRSSSKNIYLNVAVNTLKKLRSKSTPTSPALKTPAVSVNRKAQSHEGV
LGGRLAATTSYTINRSGKQQDVDLKGAILYNKLKKYAMNEEQLQEHGYPRPHPEMSGHAV
VHNLPEKKSNDPFSKICSRCGAEYKINANGSCVRKEECSHHWGRLRRNRVPGGWETLYSC
CSGAVGSPGCEVCKQHVQDGRKESLDGFVKTFSKPLPVDGNAGVYALDCEMCYTKQGLEL
TRVTVINSDLKVVYDTFVKPGSKVVDYNTRFSGVTQDDLENTTITLRDVQAVLLSMFSAE
SILIGHSLESDLFALKLIHSVVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDSVGGH
DSSEDARACMELMIWKIKEDAKVKR
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctacggggttctttcgtgggattgactgcccgttttattgtgagaataac
aatgggaaagccggtgcagatgggtgcagcagaccctactgtcacttcagacacagcaaa
caaagacgagccgcctctgggatatacgacatcaaaaagactaaagcgctttctgcgagt
ccagacgatcaaggatatgatccattcagtccagaggttgtgagaccggaaaagcattat
aatggggagccaccatcgacgggtcagggtgtggacctgggcaccatggagttggagctg
gtcaatcgggccattgaggctgttcgcagcgagatggaaagggagaagaagaagctttct
cggattggagatcaggaatatgagcccaccacgagctctgttaagagaccaaagccctct
gcatcatcacatcagggctatgatcctgggagctatcagatgggccaagcaagtgaatac
accccgtcccctcgctccagcaaatacactttggactcagagaacagcagtaacaacgcc
agcgcgttggagtatgtgcccactgctgtctccaaaaaaagcattaaaaaggtgttacct
ccgccaccatcccgtgtcaagtgtaaatacactctggataattccaaaccatcaacggac
atggagtacgacccgctgtcgaactattcggctaagccgactgttaaagaacagagaact
ttgtgttcagagggagaagggagaaagagattttaccctgaaaaacaagggaaagatgag
gaatatgttccaacggcgaaaaaaccaaggtcgtcgccacctaaggcagatgtgccgaag
tacactctaagtttctctgaatccgacgaggaaagttctgggacagagtatcggccaacg
tccctaagccgcctgcagcgcaaggggatcaacatcggcttgaaacaggaacgagagtcg
ggtttgatgggactacaaaaaaagcaggtatctaaaatagacgatggcttctcacatagc
gaatctgatgatgtggagtcccaggatgtggacaggacaaacaaaaagatagataaaaag
atatctgtgagtcagttgaaaaatattaaatctaataagccaaaaaaagaggagaaagac
tccgataagaagagttcaaaagaaagactggaaagttcaagtgtcaacaagacgtcaaaa
aattcaagtaaaaaagacaagaaccaaagtaagactgtggatggaagcagtaagtccaag
gaaaaggtgcggaaagacggaactgagtcaaagagtaatgatgaaaagaacaggaagata
gttaagataaagagtgaacacagccaaagggaaaaagagagaggaagtggtaacatcaag
aaacccaaaacagacaaacctgtaaaaaacgataaggtggcatccaaattcaaagaccaa
aagaacggaaaacttgagagcagtgcaaaggagaaggacaaaaagaaaagcagccatggg
agcggcagtaccaacagcagtagcactaaagataaaagtaaaaaaagcagctcgatccgt
gatcacaaacaggcaagagaaaccaaacagaggaatctgagccacgtggacttgttcggt
gctgagagtgccgaagaggatgatgaggaagacgagaggatagtgaggaagtctgcttct
gcttttaaacggggaagcctcatgaataataagaggaaaacctctgaagatatgtcatca
tcgtcagaggatgattctgaagtggataacgatgatggcggtggtgatgaagcagtggac
tactcctgtctgcaggatgagatggagtatgactcagaccctatggaggagtgtctgcgg
atatttaatgaatccaaagaggtcaagacggaagacaaagggagacaagctaagcagcct
tcaagggaacaggaggaggaggaggaggaagaaacagaaagcactttaactactctcttt
cctggtcagaagaagagggtgtcacattttaaagctcaaggaaagtcagaggcgtcactg
aacgctgtgccgatgacacagcggaggatgacggcgcaggagatctgttaccagcgcatg
cagaaggcccagcagcaggcagcacagctggctgctgcagtaaagactgcgtctgcatcg
accaacccaatactggggctctctggagaaaaacgacgggtggcgcaccggccaactgcc
tccctgccctcctcaaagcctggattagctaatgccagcagtcaggtgttgtcgcccacc
agggtggcgatagatcagctttcagtcaaagctcaaacgtcggcaggcatcctgtcaaag
accacatccactgcaatgcagaagagagtggctcatacccccaccctgaagagctctgcc
atgaagcgtcctgtcattcctgctgaatttggggccaaggtgcccacaaatgtccgtcag
cgttaccttaacatattcattgatgagtgcctgaagctctgttcttctgaacaagaagcc
tttcagatggctctggatgaagagaaggtggtgtatgacaggagcagcagtaagaacatc
tatctgaatgtagctgtgaacacactgaagaagctccgcagcaagagcacacctacgtcc
cctgccctcaagaccccggctgtatctgtgaatagaaaggctcagtcccatgaaggagta
cttggtggacggcttgctgccacaaccagctacacaatcaaccgctccggcaaacagcag
gatgtggaccttaaaggtgccattctctataataaactgaaaaagtatgcaatgaatgaa
gaacagctgcaagagcatggctaccccagacctcaccccgagatgtcgggtcacgctgtc
gtccataaccttccagaaaagaaaagcaatgaccctttttccaaaatctgtagtcgatgt
ggtgccgagtacaagataaacgctaacggcagctgtgtgcgtaaggaggagtgcagtcac
cactggggaagattacgcagaaacagagttccaggaggttgggagaccctttacagctgc
tgctctggtgcagttggttctcctggatgtgaagtgtgtaaacaacatgtacaagatggc
cgtaaagagtccttggatggttttgtgaagacttttagcaaaccgttgccagtagatgga
aatgcaggtgtctacgccttggactgtgagatgtgctatacaaagcaaggtttggagctg
accagagtgaccgtcattaactctgacctcaaagttgtgtacgacacgtttgtcaagcca
gggagcaaagtggtggattacaacacacggttttcaggtgtgacacaggatgatctggag
aacaccaccatcacccttagagatgtgcaggcggtgctgctgagcatgttcagtgccgag
tccattctaattggacacagtcttgagagtgacctgtttgcgcttaagcttattcacagt
gtagtcgtggacaccgccattgtgtttcctcaccgcctgggtctgccttacaaacgtgcc
ctacgcaaccttatggccgactacctcaaacgcatcatacaagacagtgtgggggggcat
gactccagtgaggatgcccgggcctgcatggaactcatgatctggaagatcaaagaggat
gccaaggtgaagagatga
DBGET
integrated database retrieval system
