Ctenopharyngodon idella (grass carp): 127518021
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Entry
127518021 CDS
T08802
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127518021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127518021
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
127518021
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
RING_XB3-XBAT31
Prok-RING_4
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
127518021
NCBI-ProteinID:
XP_051760254
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Position
8:complement(5192889..5199345)
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AA seq
320 aa
AA seq
DB search
MPLVPANQPQLIRSCQKDEYYQNNLTNNANELIHTFAGSRRWLQWRKEIELLSDLTYYVL
TTLSGYQTLGEEYVSIIQVDPSKRRIPSRMRRTALIFFHTFVPYLLDKVLICVENELETE
ANSQRQTSRTWNPLSHVRFWIQRAVGMLTESQRKSLIPLVFALQQGITLLYRLHVAVFYI
SGAFYHIGKRAAGVSYLRVGNVSGDDPRISNSYRLLGALSLLQLGVTLTLQFNNLKQRQR
ARQEWKQHRNLLPSRQVSESSSRSSRCILCLEERRNTTSTPCGHLFCWECITEWCNTKTE
CPLCREKFQPHRLVYLRSYK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcctctagttcctgcgaaccagccgcagctgatccgctcgtgtcagaaggatgagtac
taccagaacaacctgacaaacaacgccaatgagctcatccacacctttgctggttccaga
cgttggcttcagtggagaaaggaaattgaattactgtctgatctgacctactatgttctt
acaactttatctggatatcagaccctgggtgaggagtatgtcagcatcatccaggtggac
cccagcaagagaagaatcccctcaagaatgcgccgaacggcactaatcttcttccacacg
tttgtgccttatcttttggacaaggtcttgatttgtgttgagaatgagttggaaacagaa
gcaaactcacagcggcagacaagcagaacctggaacccgttatcacacgtgcggttctgg
attcagagagctgtggggatgctaactgagtctcagaggaagtctttgattccgcttgta
tttgccctgcagcagggaatcactcttctgtacaggctacatgtggctgtcttttacatc
agtggagccttttaccacattggtaaaagagctgcaggtgttagttatctaagagtggga
aatgtgtctggcgatgacccaaggatcagtaacagttaccgtctgctgggggcgctgtcg
cttctacagctgggcgtcactctcacactgcagtttaacaacctcaagcaaagacagaga
gcacgacaggagtggaaacagcatagaaatcttctccctagtcgtcaggtcagcgagtca
tcatctcgctcttcacgctgtatcttgtgtttggaggagcgcagaaacaccactagcact
ccctgtggtcatctcttctgctgggagtgcattactgagtggtgcaataccaagaccgaa
tgcccactgtgtcgagagaaattccagcctcacagattggtttacctgagaagctacaag
tag
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integrated database retrieval system
