Ctenopharyngodon idella (grass carp): 127518042
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Entry
127518042 CDS
T08802
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00310
Lysine degradation
cide01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127518042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127518042
03036 Chromosome and associated proteins [BR:
cide03036
]
127518042
Enzymes [BR:
cide01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
127518042
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
127518042
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127518042
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
SET
zf-H2C2_5
zf-BED
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
Flavi_propep
DUF7128
Motif
Other DBs
NCBI-GeneID:
127518042
NCBI-ProteinID:
XP_051760297
LinkDB
All DBs
Position
8:4789386..5045674
Genome browser
AA seq
1345 aa
AA seq
DB search
MRSKARARKLAKNDSEAVDSMYDTEPNLVTGESAEEETEDSIMSPIAVGPTSPQPCNEDF
TPKEGSPYEVPVYIPDDIPIPADLELRESSVPGAGLGIWAKVKIRMGERFGPYNGLQSAT
VKETTYGWEQMLNDHETSSQDSCIKKVMDNMGNVKFCLDGALEASGSWLKYVRTAPSHEE
HNLVMCHISEDQIYYKAIRDIEIGEELLVYMKDGVFPEGSMAPNLEDEQMYRCEHCDELF
TSKLELRRHQKYSCSSSNSIFDSLSEDFKQEREDSDEPVHECKDCEKIFPSEYSLGQHMI
VHTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCDKMDVTPQDVNFPKVFTDP
SNLQRHIRSQHVGARAHTCPECGKTFATSSGLKQHKHIHSSVKPFICKSEQSCLSLRYNY
QCPKTSRLAPPQDCDSCCFIGEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTT
SSLNKHRRFCEGKNHYNPGGIFTPGIPMTSSPILGKSKSHPGLNHGGLGFSDYFSSRAHH
AGLPFSPAPPAFPAISHGFPGIFPPSLYPRPPLLPPSPLLKSPLSNSQDGKLPPLDAPTL
SVVSSMHNSNGNVGSGLSSQSEENRESKLDLSFSDNKNKVKMNDMSDGSDLEDVNTSSGT
DLDTTTGTVSGSDLESEAESEREKSRRKPVQESKQDEVSSSSVSVSSSGNLPCERPFLSS
QHSFFPPPEEQALPPSGATTDSIKAIASIAEKYFGPGFMGLQEKKMGSLNYHSMFPFQFL
PNFPHSLYPFTDRALNPGMFFKPEPKSPREHIQKLPTATGADSPFDLTTKPKEVKPLPPP
PSKPALPSNALLAPGEEQPLDLSIGSRSRANQNGGTHEQRKNHVYGANCKAAKDEHPALT
QSQNLHQPQMPQPQVSLPQPPPPQQQPSLHYAKPSPFFMDPIYSRVEKRKLIDPVGALKE
KYLRPAPLLFHPQVSAMENMTEKLESFSALKLDAPNSLQHPSHHLFNFRSPPPSLSDAIL
RKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNK
EKPFKCHLCNRCFGQQTNLDRHLKKHEHENIPVSQQSGILSNLGTNISSPNSESDNHALL
DEKEDSYFSEIRNFISNSELNQACSSSEKRSELTEEEHPQSHTHAASKLEEEEEEMEGDD
EDEEGSLTEKSQDETASPATMVQGTYDEDEEPTPLPMSYEHTRRCIEEDAGLLDLEPLAG
FPKGLEFHKAGEEPYDIKDIFSTSVESEALKETLFRQAKTQAYAMMLSLSENANLHSSSQ
NSLDAWLNMGGGPSETSSFHPLNNI
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaaactggccaaaaatgacagtgaggcagtagacagc
atgtacgacacagagcccaatctcgtgactggcgagagcgcggaagaggagacagaagac
agcatcatgtcccccattgcggtggggcccacgtcccctcagccctgcaatgaggacttc
actcctaaagagggttcaccctatgaggtgcccgtctacattcccgatgatattcccatc
cctgctgacttggagctccgcgagtcgtctgttccaggggctggccttgggatctgggct
aaagtcaaaattcggatgggagaacgcttcggaccatacaacggactgcagagcgccacg
gtaaaagagaccacttatggatgggagcaaatgctgaatgatcatgaaacgtcgtctcaa
gacagctgtatcaaaaaggtaatggacaacatgggcaatgtgaagttctgtctggatggg
gctctggaagccagtgggagttggctcaaatatgtgcgcacagctccttcccatgaagag
cacaacctggtcatgtgccacatcagcgaagatcagatctattataaagctattagagat
attgaaataggggaggagttactggtttacatgaaggacggagttttccccgagggctca
atggcaccgaacctggaagatgagcagatgtaccgctgtgaacactgtgatgagctcttt
acatcaaagctggagttacggcggcatcagaaatactcctgcagtagcagcaactctatc
tttgactcgctaagcgaagacttcaaacaggagcgtgaagacagtgatgagccagtgcac
gagtgcaaagactgtgaaaagatcttccctagcgagtacagtctcgggcagcatatgatt
gtgcacacagaagagagggagtataagtgtgaccagtgccccaaagctttcaactggaaa
tccaacctcattcgccatcagatgtcacatgacagtggcaagcgctttgagtgtgaaaac
tgtgataagatggatgtcacaccacaggacgtcaactttccaaaagtgttcacagacccc
agcaacctccagcgccacatccgctctcagcacgtcggtgcccgagcccacacctgccct
gagtgtggcaagacctttgccacctcctcgggcctcaagcagcacaagcacatacacagc
agtgtcaagcctttcatctgtaagtctgagcagtcttgtctaagcctcagatacaattac
cagtgtccaaagacctcccggctagctccaccccaagattgtgacagctgttgttttata
ggtgaggtgtgtcacaaatcgtatacccagttctctaacctgtgtcgtcacaagcggatg
catgcagactgccgcacacagatcaagtgtaaagactgtgggcaaatgttcagcactacc
tcctccctcaacaagcaccggcgcttttgcgagggcaagaaccattataatcccggaggc
atattcacaccgggcataccaatgacatccagtcccattttaggcaaatccaagtctcat
cctggcttgaaccatggtggacttggcttcagtgattacttctcatccagggcacatcat
gcaggtttgcccttttccccagcaccccctgcattcccagccatttcccatggcttccca
ggaatctttcccccatcactatatcctagaccgccattgttacctcctagtccactgctc
aagagcccactgagcaacagtcaagatgggaagctgcctcctcttgatgctcctactctt
tcagtggtttcatccatgcacaacagcaatggcaatgtaggaagtggtctcagcagccag
tcagaggagaaccgagagtccaaactggacttgtcattctcagacaacaagaataaagtg
aagatgaacgacatgtctgatggtagtgacttggaagatgttaacacatctagcggcaca
gatctggacaccaccactggcactgtgtctggctccgacttagaaagcgaggcagagagc
gaacgggagaagagcaggaggaaaccggtgcaggagagcaagcaggatgaagtgagcagc
agttcggtatctgtctccagttcagggaacctcccttgtgagcgccctttcctctcctcc
cagcattcctttttcccaccaccagaagagcaagcacttccaccctccggggccaccact
gactccattaaagccattgcctccattgcagaaaagtactttggcccgggattcatgggc
ttgcaggagaagaagatgggctccttaaactaccattccatgtttcctttccagtttctg
cccaacttcccacattccttgtacccattcacagacagagcactcaatcctggcatgttc
ttcaaacctgagcctaaatcccctcgtgagcacatacagaaattacctacagccactggt
gcggattcaccctttgacctaaccaccaaacccaaggaggtcaaacctctccctccaccc
cccagcaagccagccttgccatccaacgccctcctggcccctggcgaggaacagcctctg
gaccttagcataggcagtcgaagccgagccaaccagaatggtggcacacatgaacagcgc
aagaatcacgtctatggcgcaaactgcaaagcagctaaagatgaacacccagcactaact
cagtcccagaacttgcaccagccccagatgcctcagccgcaagtatcccttccccagcca
cctcctccccagcagcagccgtcgctccactacgccaagccctcgccgttcttcatggac
cccatctacagcagggtggagaagaggaagctaatagacccagtaggagctctaaaggag
aagtacctgaggccggcaccactacttttccatcctcaggtgtctgcgatggaaaacatg
actgagaagttggaaagctttagcgctctgaaactggatgctcccaattccctccagcac
ccctcacaccatctttttaacttccgctccccgcctccctctctctccgatgctatctta
cgcaaaggcaaggagcgatacacctgcaggtactgtgggaaaatctttcccaggtcagct
aatcttacaaggcacttacgaacacacacaggagaacaaccctacagatgtaaatactgt
gaccgctcattcagcatctcctccaacctccagcgacatgttcgtaacattcacaacaag
gaaaagccgttcaagtgccacctctgtaatcgctgcttcggtcaacagaccaatctggac
cgccacttaaagaaacatgaacatgagaatattccagtgagtcagcagtctgggatcctc
tccaatttaggaacaaatatttcctcaccgaactctgagtctgacaatcatgcacttttg
gatgagaaggaggactcgtatttctcagagattaggaacttcatctccaatagtgagctg
aaccaggcctgtagctcctcggagaaaaggtcagagctgacagaagaagagcatcctcag
agtcacactcatgctgcctccaaactggaggaggaggaagaggagatggagggggatgat
gaagatgaggagggctcgttgacagaaaagtcgcaggacgagacggcctctcccgccact
atggtgcagggcacttacgacgaggatgaggaaccaacccctctccctatgtcttacgaa
cacacgcgcaggtgtattgaggaggatgcaggcctattagatctggaacctctggctggt
ttccccaaaggcctggaattccataaggctggcgaggagccctatgacattaaagacatt
tttagcacctcggtagagtcggaggcgctgaaagaaacacttttcaggcaggctaaaaca
caggcttatgcaatgatgctctctctgtctgagaacgcaaatctgcattcatcctcccag
aactccttggatgcctggctcaacatgggaggagggccgtcggaaacgagctcctttcac
cccctcaacaacatctga
DBGET
integrated database retrieval system
