Ctenopharyngodon idella (grass carp): 127518166
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Entry
127518166 CDS
T08802
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127518166
Enzymes [BR:
cide01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
127518166
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
127518166
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
127518166
NCBI-ProteinID:
XP_051760494
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Position
8:complement(21148105..21151766)
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AA seq
560 aa
AA seq
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MKIVTWNINGIRTFKNGIKKTLDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR
GRSGYSGVATYCKDTATPFLAEEGLTGLLANQGEAVGCYSDQEELSSEELLALDNEGRAV
ITQHHFIGTDGPQKLTVINVYCPRADPDKPERKQYKLQFYQLLQCRAEAILSSGSHVIVL
GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDHFLFETAENGNTEDEFADISQKSTSGGKF
VDSFRHFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFSDRPLVETAFIGVDIMPEVEGSD
HCPVWAQLSCTLQSSPKCPPLCTRHMPEFTGRQQKLSRFLVKVPEKLSVSKGCEESLPGS
QDSGEIRENLNPVVQGNSVAKKRPTDREADTNAHKAKRSKQTKTESNAKGSLLAFFKPKQ
TALMLSSGNLSPKQEESSQDGPGSESDTKSCPSDVQKETNLSKVTEMENENQDEVEGEST
SIDKSKDCKKGPCAGFWKTILHGPPQPPLCKSHNEPCVLRTVKKAGPNLGRQFFVCARPQ
GHASNPQARCNFFAWVEKGK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtaacatggaacataaacgggatacgaacatttaaaaatggcatcaagaaa
actctggattcattcgatgccgatataatctgcgtccaagaaactaaagttacccgtgac
ctgttggatgagaagacagcgattgttgatggctacaattcatactttagttttagccga
ggacgaagtggatactcgggtgtcgcgacctactgtaaagataccgctactccattcctg
gccgaagaaggattgacgggtctgctcgccaatcagggagaggctgttggttgctatagt
gaccaggaagagttgtccagtgaggagcttctggcactagacaatgaaggaagggctgtt
atcacccagcatcacttcattggcacagatggaccacagaagctgacagttatcaatgtt
tattgtccccgagctgacccagacaaacctgagagaaaacagtacaagctgcagttttac
caactcctccagtgcagagctgaagccatcttgagctcagggagtcatgtgattgttttg
ggtgatgtcaacacctctcacagacccatagaccactgtgatccagatgatgtggataac
tttgaagataatcctgggaggaagtggctggatcatttcctgttcgaaacagcagaaaat
ggaaatactgaagatgaatttgcagacatatcccagaaatctacctctggtggcaagttt
gttgactccttccgccattttcacccaaagcgctctaatgctttcacatgctggtccact
ctcacgggtgccaggcagaccaactacggcacacgcatcgactacatcttctctgaccgc
cctctggtggagactgcctttattggtgtggacattatgccagaggtggagggatcggat
cattgtcctgtatgggcgcagctcagctgtaccctccagtctagtcccaagtgcccgccc
ctgtgcacacgccacatgccagagttcaccggcagacagcagaaactttcacgcttctta
gtgaaagttccagagaaacttagtgtttctaaaggctgtgaagagagtctacctggatca
caggattctggggaaattcgggaaaacctgaatcctgtagtacaggggaacagtgttgca
aagaagagacctacagatagagaagcagacacaaatgcacacaaagccaaaagaagcaag
cagacgaaaaccgaaagtaatgctaaaggtagtcttttagctttctttaagcctaaacaa
acagcgttgatgctttcaagtgggaacttgagcccgaaacaagaagaatcctctcaggat
ggcccgggtagtgagagcgacactaaaagctgccccagcgatgtgcaaaaggagacaaat
ctctccaaggttacggaaatggagaatgaaaatcaggatgaagtggaaggagaatctaca
tccatagacaagtctaaggactgtaagaaagggccatgcgctggtttttggaaaaccatt
ttgcatgggcctcctcagccgccactttgtaaatcacacaacgagccctgtgttttacgg
actgtgaaaaaagcaggacctaatttaggccggcaattttttgtatgtgcccgtcctcaa
ggccacgcctccaatcctcaggcaaggtgcaattttttcgcctgggtagaaaaaggaaaa
tag
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