KEGG   Ctenopharyngodon idella (grass carp): 127518351
Entry
127518351         CDS       T08802                                 
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03250  Viral life cycle - HIV-1
cide04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127518351
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    127518351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cide03021]
    127518351
   03110 Chaperones and folding catalysts [BR:cide03110]
    127518351
Enzymes [BR:cide01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     127518351
Transcription machinery [BR:cide03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     127518351
Chaperones and folding catalysts [BR:cide03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    127518351
SSDB
Motif
Pfam: Rotamase Rotamase_3 WW WW_TCERG1 Rotamase_2 MBD X8
Other DBs
NCBI-GeneID: 127518351
NCBI-ProteinID: XP_051760870
LinkDB
Position
1:3583384..3586300
AA seq 159 aa
MSDDEKLPSGWEKRMSRSSGRVYYFNHITNASQWERPSGSGADGVGEVEKVRCSHLLVKH
NQSRRPSSWREENITRSKDEALQLIHKYIEQIKSGEEEFESLASQFSDCSSARNGGDLGI
FGRGQMQKPFEDVSFALKVGDMSGPVFTESGVHIILRTG
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtctgacgatgagaagctgccgtccgggtgggagaagcgcatgagccggagttcaggt
cgggtttattacttcaatcacatcactaatgcgagtcagtgggagcggccgagcggatcg
ggggctgacggggtcggcgaggtggagaaagttcgctgctctcacctgctggtcaaacac
aaccagtcacgccggccgtcctcctggagagaggagaacatcacgcgcagcaaagacgag
gcgctgcagctcattcacaagtacattgaacagatcaaatctggagaggaggagtttgag
agtttggcgtctcagttcagcgactgcagctcagcgaggaacggaggagacctgggcata
ttcggcaggggtcaaatgcagaagccctttgaagacgtctcgttcgcgctgaaggtcgga
gacatgagcggccccgtgttcaccgagtctggagttcacatcatcctgagaactggataa

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