KEGG   Ctenopharyngodon idella (grass carp): 127518412
Entry
127518412         CDS       T08802                                 
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cide03032]
    127518412
DNA replication proteins [BR:cide03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    127518412
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 127518412
NCBI-ProteinID: XP_051760990
LinkDB
Position
9
AA seq 2482 aa
MMAAVPLSSASLLPLLECLEDEAAGLSEQTDAYITIANRLNGEEGRQFLPVVVKHFARLS
KVLLVHISSENEELCQAALQALGFCVFHSLIVSVIPANISEDILSTLCNVVVKSKEKFTC
TRALWVISKQNFPPEVASKKAPEILKSLEAMQTREVQSILIDHESLNVVIRLLEQAPSQM
AAGAVCWAKLVIPLVVHSANKVRLRAAAALELGLPLLLEKQQEVAAIVEPMMSSMLIPEM
QKLFASKNETNMLKLWPLFVKLLGKLLHKGGAFINSLLYLEELGFRNSSPNIKKIAFIAW
KSLIDNFALNPDILCSSKRLKLLMQPLSSIQVRTEALLLTKLEVWWYLVVKLGPNLSTNF
EQVGVPLLHSTLPPDPPLQSPTTPARTPNPSNGTPNTPKTGVPSCSTPSTTPRINLNSSM
QSPQSYRSIQLLGLEMLLHWLVGPEVTAIAPKENLQLSLEPLTHPLLTSPSFFSRHASTL
ISATREGFITVGKHAPEVLLNLIWSNLIGSVSAAIEAGNKKERQGSEVLTLLLQALQSIL
SSDALPAERELLLLEATIKGIPQKVLGSAAYQVANMDVLNGTPALFLILLFYKSNQLSSF
LEDERFFSSLETLVSCGFCGPTSPLAFGEAVLGAVSGRVEDVKNKKQLWRMWSVVVNPLT
DTITQTNEVNQGDALEHNFSAIYSALMFPVFHLLPGSALPQVTQKAMISTWSRLYKAFAR
CSALVATAEENICCEELCAKISASLDSDSLKSLSMLDAIANILLIIIESIDFSPYTPQFQ
QKMKSPHTPLSWVRKRSKALGNLSTFHTLLMQTLDAFLSVDPSEESVEPTCGALNGLGLT
VVSILSTLFTNITLPTFIQEVLFTLTKPLAQLYERFSSYDEPSKPSATLGHKLEKLATDL
LGCLQTQLTLHNDEMIAVLSPLLCVLFPHKSKQIRTVVTQFWNATFGKALTLTYPEPLKS
VLSQAKQKTPLILPGFEAVDAPDDCSGQYTGESSQLDPQISGVKMTSVGKRDSLLARAEE
LKGRGSVPVAKPVSMKLDFGSPKPLNREAIEEEASVDFVFIPPETKERVLTEHQKEVKRT
KRVDIPALYNNLDASQDTSVFSQYTQSQEESMDKLTKDERDQPEEEPKVHLKEVTTSEEP
STDVKVTQGTTSDTPEKSMPNKAQTLENDRSPSSGISVDVSGHEKSGLEGTSPNVSSSSD
MISGTPPKPNSRRQSFITLEKYVEGKSSPASVAFTGPPIRKSSRLDSSKSLECTPNDSQN
QTTKEDSQKSQNISSTDPSAQNEKAREEDKDGIKSTGGHPCEGTDEEDLVPDTQTQVSSE
ASGVKSSPVSKASVEEQDSPEKDSQSFADSQSSQEPRRSSRRRSKPVRPGEDPGEVKGKE
HVNQVADSTMTNTQKSVLAPPSSTLTGRRRSKVLEDTKVEGDQQKSKGMKSQSVSQIFSA
ESSQALPRASQTQSSPQSSPVTQSDSQSRERLPTLNESEGLSLGRLTKKTRTQLDESTDK
EADENSENDPQNAASSLKKRHSQTPLSDSEADSQQTVRTRRTRRSESQLLEMSGLQTKED
LSQTDSQTVTMVKGRAMRRRTAEEETDSSRDVTSTVNADELSASQDSSQGLGRYRTRRSK
GLLTTDNTESESPDSREDGPRPKKRLRKPLSTEVLPVATEPKFTEMVPDKEDVNIQSDVS
IEMAQDEADLKPETSLGISVSETKEEQDDKEVLAPVSQPHEPISSEIVEIELKTDTDEKE
IICDKGEGEEANSFSQAGSEDLKTDGLRKCPHTRGRGRGRRRSRSCNCFLNIQEVFSQNS
DFQESQDLKNEEVPHAVDTQESQDLKNEQVPLAVDTQESQDLKNEQVPLAVDTQESQDLK
NEQVPLAVDTQESQDLKNEQVPLAVDTQESQDLKNEQVPLAVDTQESQDLKNEQVPLDAD
TINSQPEQSSPTSVSEKSKSSAIADFPDADVQHFSDLPAQLLCEVSSSESPITKLGVIVS
QLSEAEEGAQLELSNAMDESNNVFVKVLVVETNQLESSGCTDSPKHNKELDNPSVSQEPL
QSSTPQDTSPSQGRPVEDASICQEQLESSHVQQEDAVKESEDLAVSETSGEKVVLPEESN
GKELLDNNVALIEKDKDTQIDNQALSVDIQELSVLPQSSTSEACLDSPLKPKPLDALSGE
LEPGQSPSRNRSRVWSPSASPSTSILKKGQKRTCEEDTPSPLHKSRRVSFATPIYHQELA
DDIDRRSPVIRTSSPRSKVLSGQSKYITTPTKGYSSLSPRNLRSPGSKSSKKCLISEMSQ
EPHPIAKDCVYPALVGCSTPVEAVLPQISSNMWPRGFGQLVRARNIKTVGDLSALTPSEI
KSLPIRSPKLSNVRKALKTYHEQQRKGRSDDLKSFDEMEKMTSEPEEMELPQNQDEEQTP
GETQDDKPSEVGMDAGPMAEEKKCQDLLSDVVALGGRLTSEELGRCSPNHLGLMHEHLSG
MMRSIVTHLQSRLLRNPDDSLP
NT seq 7449 nt   +upstreamnt  +downstreamnt
atgatggctgcagtaccactatctagtgctagcctccttcctcttctggagtgtctggaa
gatgaagcagctgggctgtcagagcagacagatgcctacatcaccatcgcaaaccgtctc
aatggagaggaagggcgtcagtttctgcctgtggttgtaaagcattttgcacgtcttagt
aaagtccttttggttcatatctccagtgagaacgaggagctgtgtcaagctgcactgcag
gctttgggattctgtgtcttccactcactcattgtttcagtcataccagcaaatatttca
gaagatatactgtctacgctctgtaatgttgtggtcaaatccaaggagaagtttacgtgt
acgcgagcattatgggtgatttcaaaacagaattttccgccagaggtggcatccaaaaag
gccccagagattctcaagagtctagaggccatgcagacccgagaggttcagtcgatcctc
attgaccatgagtccctcaatgtcgtcataaggttgctggagcaggccccctctcagatg
gctgctggagctgtgtgctgggccaagctggttattcctctcgtggttcactcagcaaat
aaagtgcgcttgcgtgcagcagcagccctggaactgggcttgcctcttcttctggagaaa
cagcaggaggtggcagctattgtagagccaatgatgtcctctatgctcatccctgaaatg
cagaagctgtttgcctctaagaatgagacgaatatgctgaagctctggcccttgtttgtg
aaacttctggggaagttactccacaaaggcggtgcttttattaattccttgctgtattta
gaggagctgggtttccgcaactcttctcctaatattaagaagattgctttcatagcttgg
aagagcctcattgacaattttgcccttaatccagatatcctgtgcagcagtaagcgcctg
aagctcctcatgcagcccctcagttccatccaagtcaggactgaagctcttctgctcacc
aagctggaggtgtggtggtatctcgtagtcaagctcggacccaacctgtccactaacttt
gagcaggttggcgtgcctctactgcacagcacacttcctcctgatcctccactgcagtcc
ccgactacacctgctcgaacacctaacccaagcaatggcacccctaatacacctaaaaca
ggcgttccctcctgcagcacgccgagcactactcctcgcatcaatctgaacagcagtatg
cagtcgcctcagtcctaccgctccattcagctcctgggactagagatgcttctgcactgg
ctcgtgggtccagaggtcacggccatagctcctaaagaaaatcttcaactcagcctggag
cccctgacacacccgctcctcaccagcccttccttctttagcagacatgcctctaccctc
atatcagccaccagagaaggcttcattactgtgggaaaacatgctccagaagtactactt
aatctcatttggagcaacctgatcggttctgtcagcgcagcaatagaagctggtaataag
aaggaacgacagggttcagaggtccttacgcttctcctacaggctctgcagtccatcttg
tcctcagatgctctgcctgctgaacgtgaactgcttttgttggaagccaccattaaagga
atccctcagaaggtgcttggttctgcagcttatcaagtggcaaacatggatgtgttgaac
ggtacacctgcacttttccttatattgctattctataaaagtaaccagctttcatcattt
cttgaagatgagaggtttttctcaagcctggagacccttgtgagctgtgggttttgtgga
cctacatcgccccttgcatttggagaggctgttttaggagcagttagtgggagggtggag
gatgttaagaacaaaaaacaactctggaggatgtggagtgtggtggtaaaccctctgacg
gacaccatcactcagaccaatgaagtgaatcaaggagacgctctggagcataacttcagt
gccatttacagtgccttgatgtttccagtctttcatctcctgcctggttcagccctaccc
caggtcactcagaaggccatgatcagtacttggtccaggctttacaaggcatttgcccgc
tgctcagctttggtagccacagcggaggagaacatatgctgtgaagagctgtgtgccaag
atctctgcctctcttgacagtgattctctgaaaagtctgtctatgctagatgcaatagca
aatatcttgctgatcatcattgagagtattgacttctctccttacaccccacagtttcag
cagaagatgaaatctcctcatacacctttgagttgggtacgcaagagaagcaaagctctg
gggaatctctcgaccttccacactctcctgatgcagactctagatgcatttctttctgtg
gacccctcagaagaatctgtagagcccacctgtggagctttaaatggacttggcttgaca
gtggtctctatcttgtctactcttttcactaatatcacattgcccacgttcatacaagag
gtgctgttcaccctcaccaaaccacttgcacaactttatgaacgattctccagttatgat
gaaccatcaaagcccagtgcaacactcggacacaagttggagaaactagccacagacctg
cttggctgtcttcagacacagctgactctgcacaatgatgagatgattgctgtgttgtca
cccttgctctgtgtgctttttccgcacaagagcaagcaaattcgcaccgtggtcactcag
ttctggaatgccacctttggaaaagcactcaccttgacttaccctgagcctcttaagtct
gttttaagtcaggctaagcagaaaactccattgattttacctggttttgaagccgttgat
gctccagatgattgcagtggacagtatacgggtgagagttctcaactggacccacaaatt
agtggggtgaagatgacctctgttggaaagagggactctcttctggcgagggcagaagag
cttaaaggaagaggctctgtacctgtagcaaagccagtgtctatgaagttggattttgga
tcacccaagcccttgaatcgagaagctattgaggaggaggcatcagtagattttgttttc
attccacctgagacaaaggagagagtgctgactgagcaccagaaagaggtcaaaaggact
aaacgggttgacattcctgctctctataataatttggatgcctcacaggacaccagtgtc
ttttcacagtatactcagagtcaggaggagtccatggacaaattgacgaaagatgaaagg
gatcaacctgaggaagagcctaaggttcacctgaaggaggttaccacaagtgaagaacca
tccacagatgttaaagtaacccaaggcaccacatcagacacaccagagaaatctatgcca
aataaagctcaaactttagagaacgatcgttctccatccagtggcatctcagttgatgtg
agtgggcacgagaaaagtggactagaggggaccagccctaatgtatcgagttcatctgat
atgatatctggtacacctcctaaacccaacagcagacgtcaatcgttcataacgttagag
aaatatgttgaagggaaatcaagtcctgcaagtgttgcatttacgggtccaccaatccgg
aaatcaagtagactggattcttcaaagtctttggaatgtactccaaatgactcacagaat
cagactacaaaagaggactctcagaaatctcaaaacataagcagcactgacccatctgct
caaaatgagaaagcaagggaagaggacaaagatgggattaagtcaacaggaggtcatcct
tgtgaaggtactgatgaagaggatttggtacccgatacccagacccaagtatctagtgaa
gcatcgggtgttaagagcagtcctgtgtccaaagccagcgtggaggaacaagactcgcct
gaaaaagattcacagagttttgctgattctcaatctagtcaagaaccaagaaggtcgagc
agacggcggagtaaaccggttcgcccaggggaagatccaggggaggtgaaaggcaaagaa
catgtcaatcaggttgcagactcaacaatgacaaacacacagaagtcagtacttgcacca
ccaagtagcacgttgactggaaggaggagaagtaaggttctagaggacactaaagttgaa
ggtgaccagcagaaaagtaaaggaatgaaaagccaaagtgtttcacagattttctctgca
gagtcttcacaggcacttccacgggcaagccaaactcagtcctctccccagagttcacct
gtaactcagtcggatagccaaagcagagagagactgccaactctcaatgagtctgagggg
ctgtcactgggtagactgacgaagaagactagaacacaacttgatgaatccacagacaag
gaggcagatgagaactctgaaaatgatcctcaaaatgctgcatcttctttaaaaaagaga
cattcacagacacctctttctgattctgaggctgatagccagcaaactgtccgaacgcga
agaacaaggagatctgaatcccagttactggagatgtctggtttgcagaccaaagaagat
ttgagtcagacagactcccaaacagtgacaatggtgaagggaagagctatgagaaggaga
actgcagaagaagagacagactctagcagagatgttacatcaactgtaaatgctgatgag
ttaagtgcgagccaagattcctctcaagggcttggtagatacagaactcgacgatctaaa
ggcttgttgactaccgacaacacagagtctgaaagccctgatagcagagaagatgggcca
aggcctaaaaagagacttcggaaacccctgtccactgaggtgctgccagttgccacagaa
cctaaatttactgagatggtgccagacaaggaggatgttaatattcaatcagatgtttca
atagagatggcacaggatgaggcagatctgaaacctgaaactagtttgggaatttcagtc
agtgagaccaaagaagagcaagacgataaagaggtccttgcccctgttagtcagccacat
gaaccgattagctctgaaatagttgagatagaattgaaaactgatacagatgaaaaagag
atcatctgtgataagggagagggtgaagaagcaaattcattttcacaagctggatcagaa
gatttaaagactgatggtttgcgtaaatgcccacataccaggggacggggacgtggacgt
agacgatctaggagctgcaactgctttttaaacatccaggaggtgttctcacaaaacagt
gactttcaagaatcacaggatctgaaaaacgaggaggttccacatgctgttgacacccaa
gaatcacaggatctgaaaaatgagcaggttccacttgctgttgacacccaagaatcacag
gatctgaaaaatgagcaggttccacttgctgttgacacccaagaatcacaggatctgaaa
aatgagcaggttccacttgctgttgacacccaagaatcacaggatctgaaaaatgagcag
gttccacttgctgttgacactcaagaatcacaggatctgaaaaatgagcaggttccactt
gctgttgacactcaagaatcacaggatctgaaaaatgagcaggttccacttgatgctgac
accataaactctcaacctgagcagtcaagcccaacatccgtatcagagaaaagcaagagc
tcagcaattgcggatttcccagatgctgatgttcagcatttttcagacttgcctgctcaa
ctcctatgtgaggtttcatcttctgaaagccccattacaaagcttggtgtaattgtttct
cagctgtctgaagcagaggaaggagcacagcttgaattatccaacgcaatggatgaatca
aacaatgtgtttgtaaaagtcctggtggtagagacaaatcagttagagagttctgggtgc
acagatagtccaaagcacaacaaagaattggacaacccttcagtaagtcaagaacctctc
caaagttcaacacctcaagacacatctccaagtcaaggtcgcccagtggaagatgcatct
atatgccaagagcaactagagtcttcacatgtccagcaggaggatgcagtgaaggaaagt
gaagaccttgctgtttcagagacgagtggagaaaaggttgtgttgccagaggagtcaaat
ggcaaagaattacttgacaataatgttgctctcatcgagaaggacaaagacactcagatt
gacaaccaggctctttctgttgatatacaagagttgtctgtactacctcaaagtagtaca
tctgaagcctgcttagattctccactcaagcctaaacctttagatgctctcagtggtgag
ctagagcctggccagagcccgagcagaaaccgatctcgagtatggtcaccatctgcttca
ccatctaccagtattctgaagaagggacagaagagaacatgtgaagaagataccccatcc
ccccttcataagtctcgcagagtgtcttttgcaaccccaatttaccatcaagaactggct
gatgatattgatagacgtagtccggttattcgcacaagctcacctaggtcaaaagtcttg
agtggacagtcgaagtatatcactacacccacaaaaggctattcaagtctaagtccacgt
aacctccgtagccctggatccaaaagctctaaaaaatgcctgatttcagagatgagccag
gagccacatcctattgctaaagattgtgtttatccagcacttgttggctgctctacccct
gtagaggctgttttaccgcagatatcctccaacatgtggcctcgtggctttggtcaactt
gttagagccaggaacattaaaacagttggagacctgagtgctcttacccctagtgaaatc
aagtcacttcctattcgttcaccgaagctgtccaatgtgaggaaagcacttaaaacctat
catgaacagcagagaaaagggcgttctgatgacctcaagagttttgatgaaatggagaaa
atgacatctgagcctgaagagatggagcttcctcaaaaccaagatgaggagcaaacacca
ggagagacacaagatgacaaaccatcagaagtgggaatggatgcaggaccgatggcagag
gagaaaaaatgtcaagatttgctctcagatgttgtagcacttggtggacgcttaacttca
gaggaacttggtcgctgttcacccaaccacttgggcctgatgcacgaacatctgagcgga
atgatgagaagcattgtgacccatctgcagtcacgcttgctgagaaatcctgatgatagc
ttgccataa

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