Ctenopharyngodon idella (grass carp): 127518415
Help
Entry
127518415 CDS
T08802
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127518415
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127518415
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127518415
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127518415
Ubiquitin system [BR:
cide04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127518415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Dsc3_N
DUF2014
Motif
Other DBs
NCBI-GeneID:
127518415
NCBI-ProteinID:
XP_051761008
LinkDB
All DBs
Position
9:complement(18136171..18173940)
Genome browser
AA seq
2607 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGDCPTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINLLKSLE
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHTDFDPQTVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHIT
LIVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDR
KLTGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVEGCLP
GVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARILMKLMPPDNTTVESLRAICLDHAKL
GENSLSPTLDSRFFGPPPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKSVAEACQPVVEGTIPVSPI
NQTTHDQALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQ
KIVWASGCGSVQHVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALMPTAL
DALGKEKAWQTFIIDLLLHCQSKSVRQMSQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGDPGVE
ETILEGHIGVTKELLAFQTPEKKFYIGCEKGGASLIKELMDDFLFPASNVYLQYMKSGEF
PTEQAIPVCSTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDEDMSGDEKQDNE
SNVDPRDEVFGYQHQFEDKPSLSKSEDRKEYNIGVLRQLQVIFGHLAASRLQYYVPRGFW
KQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCP
HRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKK
LPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQVIQ
QNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGIGGEGERNRWYKFDDGDVT
ECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSELV
KYITELTVTSKPHQVKMPSVIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVYLNS
PPGQEHLLPEAEEMAMISIQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHNKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPSSQA
CDNLSLSEHLFRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLGVPATFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLPNPYGDPNITA
PIMPLQQLVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQVS
EVAYSYTYELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKR
AYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWS
PPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEVVSEEDAGRNPSSTQQLLP
GEVTGQQQHTEPDEQEALEEQDPSPPEDTALYPHSPGSKFQQQNNLPHTQPYTGPAAQHV
NNPQRPGPRAQENWEPPEEVPPSQTKD
NT seq
7824 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctcccctgtgggagggaatgacggtcagggccaggctccg
gatggccagtcccagccacccttgccccagaaccagacatcctctcccaactcatccaac
gagaactctccagtgagcccaccagatgagcagggtcagggggactgtcccactcccctg
gaggaggaggagccagctttccctcacactgaactggccaagctggatgacatgatcaac
agacctcgttgggtcgttccagttttgccaaagggtgaattagaagttcttcttgaagct
gctatagatctttgtaaaaaaggacttgatgtcaagtgtgaagcatgccagagatttttc
agagatggcttgacaatatcctttacgaaaatactgacagatgaggctgttagtggatgg
aaatttgagatccatcggtgcatcattaataacgcccaccgattggtggagctgtgtgtg
accaagctttctcaggactggttccctctgctagaactcttggcaatggccaccaacccc
cactgtaagttccacatctacaatggtactcggccctctgagacggtgcctgctggggtt
cagctagctgaggatgagctgtttgcccgtccacctgaccctcgctctcccaagggctgg
ttggtggatttaataaacaaattcggcaccttaaacgggtttcaaattctgcatgatcga
ttcatgagcggccaagctctgaatgttcagatcatcgctgcactcattaagccttttgga
cagtgctatgagtttctcactttgcacacggtgaagaagtacttccttcccatcatagaa
atggttccccagtttctagaaaacctcactgatgaggagttgaaaaaggaagcaaagaac
gaagccaaaaacgatgccctgtctatgataatcaaatctttgaagaatctggcttctcga
gtaccaggacaagaggaaaccgtgaagaatttagaaatatttaggttaaaaatgattctt
aggttattgcagatttcttcttttaatggcaaaatgaatgcactaaatgaagtaaacaag
gtgatttcaagtgtttcctactacacgcatcgtcatggtaatcctgaagaagaggaatgg
ctgacagcagagcgcatggcagaatggattcagcagaacaacattttgtctattgtgcta
agagacagccttcatcagccacagtatgtggagaaactggagaagatcctgcgatttgtc
atcaaagaaaaggccctaacacttcaggacctggacaacatctgggccgctcaggctggg
aaacatgaggctattgtcaagaatgttcatgatctccttgcaaagctagcatgggatttc
tcacctgaacagctggaccatctcttcgactgcttcaaggagagctggactaatgcaagt
aaaaagcagagagagaagttactggaattgattcgtcgactggcagaggatgacaaggat
ggtgtgatggctcacaaagtgcttaatctgctgtggaatttggcccatagtgatgatgtt
cctgtggatataatggaccaggcccttagtgctcacatcaagattttggactatagctgc
tcccaggacagggacacacagaagatgcagtggatagacaggttcatagaagaattaaga
actaatgacaaatgggtgattcctgcactgaagcaaatacgggagatctgtagcctcttt
ggagaagccccccagaatttaagaaagaaaatacctattaacttactaaagagcttagag
ggtcaaacacagcggagcccccatgtcttctatcgacatgacctaatcaaccaactgcag
cacaaccatgcactagtcactcttgtagcagagaacctgtctgcatacatggagaatatg
aggcagttctcaaaagagcacacagactttgatcctcagacagttaggccaggaagtcgg
tatagtcatgttcaggaggtccaggaacggcttaatttcttgaggttcttactaaaagat
gggcagctctggctgtgcgcacctcaggctaagcagatctggaagtgtctggcagagaat
gcagtgttcttgtgtgatcgggaggcctgcttcaaatggtactccaaactcatgggggac
gagcccgaccttgaccctgacatcaacaaggacttctttgagaacaatgtgctgcagctc
gacccctcactgctgacagagaacgggatgaaatgctttgaacgattcttcaaggcagtc
aactgcagggagggcaaactagtggcaaaacgccgggcgtacatgatggatgatttggag
ctgatagggctggattacctgtggagggttgtgattcaaggaagtgatgacattgctagc
cgagcaattgatttgcttaaagagatttatacaaaccttggaccaaaattacaagccaat
caggtagagatccatgaggattttattcagtcttgctttgaccggctcaaagcctcctat
gacactctgtgtgtactggatggagataaagacagcattaactgtgccagacaggaggcc
atccgcatggtgagagtgctgactgtgctcagggagtatataaccgagtgtgacagtgac
taccatgaggagaggaccatcctgcccatgtctagggctttcagaggaaagcatatcacg
ctaattgtgcgtttcccaaatcaaggccgacaagttgatgatctggatatttggtcacat
accaatgacacaattggttctgtgcgacgctgcattctgaaccgaataaaggccaacagc
acgcacaccaaaatagaacttttcatcgggggagagatcatagacccagcagatgacagg
aagctaactgggcagctaaacctcaaagacaaaactctcatcacagccaagctcacccag
gtcagcgccaatatgccttccagtccagacagctcctcagactcctccactggctcccct
gggaaccatggcaatcactatagtgatgggccaaatcctgaagtagagggctgtcttcct
ggagtgataatgtcgctgcacctgcgctacatctctttcctctggcaagttgcagacctg
ggctgtaatctcaacatgcctctcctacgggatggagctcgtattttaatgaagctcatg
cctccagataacaccacggtggaaagcctgcgagccatttgtctggatcatgccaaactt
ggcgaaaacagccttagccccacattggactcgcgtttctttgggccgccaccatctcaa
gtgctttacttgatagaggtggtgtacgccttgctcatgcctgccagtgggacgttgggc
gaggatgctagtgacttccagtacaacttcttgaagagtggtggcctgccactggttttg
agcatgctcaccagaaataacttcctgccaaatgctgacatggagacccggcggggagct
tatctcaacgcactaaaaatagccaaactgctgctcacagctgtaggctttggccatgta
aagtctgtggcggaggcctgccagcctgtggtggaggggactatccctgtatctcctatc
aaccagactacacatgaccaagctctagtgctacagaacgccctgcagaatatccccaac
ccgtccgccgaatgcatgctgcggaacgtggcaatccgccttgcccagcagatctcggat
gagaacttcttccaggcctccaagtatatcccagatatctgtgtcattcgagcagttcag
aagatagtctgggcttctggctgtggctctgttcagcatgtcttcagttctaacgaggag
atcagcaagatctacgagaagaccaatgctggcaatgagccggatgcagaagacgagcag
gtgtgctgtgaagctctggaagtcatgaccctttgtttcgccctaatgcccactgcacta
gatgcacttggcaaagaaaaggcctggcaaaccttcattatagatctgctgctgcactgc
cagagcaagtctgttcgtcaaatgtcccaagaacaattcttcctcatggcaacccgatgt
tgtatgggccataggcctcttctgttcttcattaccctcctcttcacagttttaggtagc
actgcaaaagagcgggcaaagcacgctgctgattacttcactcttctaaggcacttactc
aactatgcatataacagcaacattaatcttccaaatgcagaagttctcttaaataatgag
attgattggttaaagcgaatccgggatgaagtgaagaggactggggatcctggggttgag
gagaccattttagaaggtcatattggtgtcacaaaagagctactggctttccagacccca
gaaaagaagttctacattggctgtgaaaaaggaggtgctagtctcatcaaggagttaatg
gatgacttcctgttcccagcatctaatgtgtacctgcaatacatgaagagtggagaattc
cctactgaacaggccatacctgtttgtagcaccccagccaccatcaatgctggctttgaa
ctgctggttgcacttgccgtcggatgtgtgcgaaatctcaagcagattgtggacacacta
actgatatgtactatttaggttgtgaaccacttacagaatgggaatatttgccaccagtt
ggcccacggcccaccaaagggtttgtgggtctgaaaaatgcaggtgcgacttgctacatg
aactcagttatccagcagctctacatgattccccccatcagaaatggcatcctggccatc
gaaggcacaggcagtgacgtagatgaagatatgtctggagacgagaagcaagataatgag
agtaatgtggatccccgggatgaggtgtttggctatcagcatcagtttgaagacaaacct
tctctcagtaagtcagaggacaggaaggaatacaacattggggttcttcggcagttgcag
gtcatctttggacacttggctgcctccaggttgcaatactacgtccctaggggattctgg
aagcagtttcggttgtggggtgagccagtcaatctgagggaacaacatgatgctctggag
tttttcaactcgctggtggacagtttagatgaggctttgaaagcattgggtcaccctgcc
atgctgagcaaagtactgggtggctcttttgctgaccagaaaatatgtcagggctgtcct
cacagatatgaatgtgaggaatcgtttacgacgttgaatgtagatatcagaaaccatcaa
aatctccttgattctatggagcagtatgtgaaaggagacttgcttgagggtgcaaatgcc
taccactgtgaaaaatgcaacaagaaggtggacacagtgaagcgtttactaattaagaag
cttcctccagtcctggccatccagttgaaacgctttgattatgactgggaacgagagtgt
gccattaagttcaatgactactttgagttcccacgagagttagacatggagccctataca
gtagctggagtagctaagctggaggggtctgatgtgcacccagaaaaccaggtgatccag
cagaatgagccttcagagccggaacccccctgcagctctcgttatcgtttggtgggagtg
ctggtccactcaggccaggctagtggaggccattattactcctacatcattcagaggaat
ggaattggtggtgagggagaaaggaaccgttggtataagtttgatgatggtgatgtcacc
gagtgcaagatggacgatgacgaggagatgaagaaccagtgctttggtggagagtacatg
ggtgaggtctttgatcacatgatgaagcgcatgtcctacaggcgacagaagcgctggtgg
aatgcctacatcctcttttatgagcgaatggacacattagacaaggacagtgagctggtt
aaatacatcactgagctcacagtgaccagcaaacctcaccaggtgaagatgccctctgtt
atcgaacgcagtgtgcgcaaacagaatgtgcagtttatgcacaaccgtatgcagtacagc
ttggagtacttccagttcatcaggaaactgctgacctgtaacagcgtgtacttgaactca
ccgccaggtcaagaacaccttttgcctgaagcagaagaaatggctatgattagtatacag
cttgctgctagatttctcttcagtactggattccacaccaagaaagtagttcgtggccct
gctagtgattggtatgatgcactgtgcatcttgctgcgacacaataagaatgtgcgttac
tggtttgcacacaacgtcctcttcgcatatccaaaccgcttctcggagtacctgcttgag
tgccccagtgcagaggttcgcggggctttttccaaactcatcgtattcattgcacatttc
tcattgcaagatggaccctgcccgtcacccattgcctcacctggaccttcaagtcaggcc
tgtgataatttgagtctaagtgagcacttattccgtgctgtacttaatctgctgagaagg
gaagtgtctgagcatggccgtcacctgcaacagtactttaacctattcgtcatgtatgcc
aatcttggcttggcagagaagactcagctgttgaagcttggggtaccagccaccttcatg
cttgtggccctggacgagggtccgggccctccaattaagtaccagtatgctgagctagga
aagctctatactgttgtgtcacagctggttcgctgctgtgatgtgacgtcacgtatgcag
tcatcaatcaatggtaaccctcccttgccaaacccatatggagaccccaacatcactgct
cccatcatgcctctgcagcagctggttgtagacattctgtttgtgcgcaccagttatgta
aagaagattatagaggactgcagtaactcagaggacactatcaaattgctaagattctgc
tgttgggagaaccctcagttttcttccactgtgctcagtgaactactgtggcaggtgagt
gaggtggcatattcatacacgtatgagttaaggccttacctggacttgctcctccagatc
ttgtttattgaggactcatggcagactcacaggatccacaatgtgctgaagggaatccct
gatgaccgtgatgggctttttgacaccattcagcgctctaaaaaccactaccaaaagaga
gcttatcagtgcatcaaatgcatggtggctcttttcagcaactgctcagtggcctatcag
attctccagagtaatggcgatctaaagaggaagtggacatgggcagtggagtggctcggt
gacgagctggaacgaaggccgtacactggcaatacccagtacacgtataacaactggtcc
cctcctgtccagagcaatgagacttccaacggatacttcctggagcgctcccacagtgct
cgtatgactttagccaaggcctgcgaattgtgcccagaggagtgtcacttaacgaagcac
gaggtggtatctgaagaggacgctggccggaacccgtcctcgacacagcagcttttgcca
ggggaagtgacaggccaacaacagcacaccgagcctgatgagcaggaggcccttgaagag
caggacccttctcctccagaggacactgctctgtaccctcactctccaggctcaaagttt
caacagcagaataacctcccgcatacgcagccgtacactgggcccgcagcacagcacgtc
aacaaccctcagcgtccaggcccacgagcacaagagaactgggagccccctgaggaggtg
ccacccagccagactaaagactaa
DBGET
integrated database retrieval system
