Ctenopharyngodon idella (grass carp): 127518440
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Entry
127518440 CDS
T08802
Name
(RefSeq) speckle-type POZ protein-like A isoform X1
KO
K10523
speckle-type POZ protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127518440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127518440
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
127518440
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
127518440
NCBI-ProteinID:
XP_051761079
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Position
9:complement(21357173..21368039)
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AA seq
416 aa
AA seq
DB search
MARKGQVVKALGPSALLVVGSELAMSGVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMW
TINNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKS
EVRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLT
LFCEVSVVQDSVNISGQSNMNMLKVPECQLSDDLGNLWECSRFTDCTLYVGGQEFKAHKS
ILAARSPVFNAMFEHEMEESKKNRVDISDVEPEVFKEMMGFIYTGKAPNLEKMADSLLAA
ADKYALERLKVMCEEALCNSLSVENVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGC
KDGKNWNSNHATDIMETAGWKSMIQSHPHLVAEAFRALASAQCPHFGLPRKRLKQS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaaaggtcaagtggtgaaagctttgggaccgtcagcgcttcttgtagtgggg
agtgagctggcgatgtcaggggtcccaacccctcctcctccaggggagatgtccagtggg
cctgtggcagagagctggtgctatacccaggtcaaggtagtgaaattttcctacatgtgg
acaataaacaacttcagcttctgtcgagaagagatgggtgaagttttgaagagctctacc
ttctcctcagggcctaatgataagatgaaatggtgcctgcgggtcaatccgaagggactc
gatgatgaaagtaaagattatctatcgttatatttgctattagttagttgtccaaaaagt
gaagtcagagccaagttcaaattttctttactgaacgctaaacgggaggagacaaaagct
atggaaagccaaagagcctatcggtttgtccaaggcaaagactggggcttcaaaaaattt
attaggagagattttctgcttgatgaagcaaatgggctgctaccagatgataaactcacg
ttattttgtgaggtaagtgttgtccaggactccgtgaacatctctggacagtccaacatg
aacatgttgaaggttccagagtgccagctgtccgatgacctgggtaacttgtgggaatgc
tcacgcttcacagactgcactctatatgtgggggggcaggagttcaaagcccacaaatcc
atcctggcagcgagatcaccggtctttaatgccatgtttgaacatgaaatggaggagagt
aaaaagaaccgagtggacatcagcgatgttgaaccagaggtttttaaagaaatgatgggc
ttcatatacacgggaaaagcaccaaatttagaaaaaatggctgatagtttattagctgca
gctgataaatacgctctggagcgcttaaaggtcatgtgtgaggaagccctttgcaacagc
ctctctgtggagaacgtggcagacaccctcatcctggctgacttgcacagcgccgaacag
ctcaaagcacaggccatagattttatcaataggtgcagtgtcctccgacagctgggctgt
aaagatgggaaaaactggaatagcaatcatgccacggacataatggagaccgcaggctgg
aagtcaatgatccagtctcatcctcacttagtggcggaggctttccgtgcgcttgcgtcg
gcacagtgcccccacttcggcctgcccaggaagcgcctaaaacagtcgtga
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