Ctenopharyngodon idella (grass carp): 127518485
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Entry
127518485 CDS
T08802
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127518485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127518485
03021 Transcription machinery [BR:
cide03021
]
127518485
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
127518485
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
127518485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
127518485
NCBI-ProteinID:
XP_051761159
LinkDB
All DBs
Position
9:complement(17435563..17457648)
Genome browser
AA seq
727 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNPSETSKCAMESGDENTGAQTNGLDFQRQTVQTTSAITNA
HAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQHSAGQQSSTSGASISASAATPITLSQP
IQITPSSTLRICSGGIFTYPGDVSSVKQLQQLQQQQNLNLQQFVLVQPGHPIATQLQPAQ
FIISQTPQGQQSLLQAQNLLTQLPQSQANLLQTQPSITLATQPATPTRTIAATPIQSLAH
SQTTPKHIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTI
SRFEALNLSFKNMCKLKPLLEKWLNDAENQTSDQALSSPSSLGSPGLGLEGLNRRRKKRT
SIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSG
SIASTPIKAIFPPTTPLAPSTASLVMFKFSPSTASLVTSNTPTTMTVNPVMSLTSTSVSN
VGFTGTTIGSATNTASVISTAPVVTTAASSPSLSPSPSAVQTSSAEQASAQETVTAVSQA
PSSLASTLGTGQVMVAAPSLSAALQGAAQLPTSASIAAMAAAAGLNPGLMASSQFTPGGA
LLSLAPGGLGSALSPALMSNSTLATIQGVWSALASGGTLPITSLDGSGNFLFANTSAGST
PNLVTAPLFLNPQNLSLLASNPVSLVSAGGAAGAGALNLHITADAHQSAVTTATMPASTI
TTASKAQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatccatcggaaacaagtaaatgtgcaatggagagcggggacgaaaacactggtgcccaa
acaaatggactggactttcagaggcagactgtgcaaacaacaagcgcaatcaccaacgca
cacgcacaggccttgctccaacagttgactttgactccagcgcagcagcagttattgctg
cagcaggctcaggctcagctcctggcagcagcggtgcagcattcagccggccagcagagt
agcacttcaggagccagcatctctgcctccgctgccacccccatcaccctctctcaaccc
attcagatcacacctagctcaacactaaggatttgctctggcggtattttcacctatcca
ggggatgtctcaagtgttaaacagttacagcagctgcaacagcagcagaacctcaacctg
cagcagtttgtgctggtccagccgggccaccccatcgcaacacagctgcagcccgcgcag
tttatcatctcgcagacaccacagggccagcagagtctcctgcaagcccagaaccttcta
acacaactacctcaaagccaagccaacctcctgcagacccagccaagcatcacacttgcc
acacagcctgcgacacccacacgcacgatagcagcgacccccatccaatccctcgctcac
agccagacgacaccaaagcacatcgacacacccagcctggaggagcccagcgacctggag
gagctagagcagtttgccaagaccttcaaacagagacgcatcaaactgggcttcacgcag
ggggatgttggccttgccatgggaaaactttatggaaatgacttcagccaaaccaccatt
tctcgctttgaggccttgaacctgagctttaaaaacatgtgcaaactgaagcctctgctt
gaaaaatggctcaatgatgcagagaaccagacgtctgaccaggccctgtccagtcccagc
tctcttggctcgcctgggctgggcttggagggcctgaaccgccgccgcaagaagaggacc
agcatcgagaccaacatcagagtggccttagaaaagagctttctggagcagaaccaaaaa
cctacctctgaggagatcaccatgatcgcagaccagctcaacatggagaaggaggtgatc
cgagtatggttctgtaaccgcagacagaaagagaagaggatcaacccgcccagcagtggc
agcatcgccagcacccctatcaaagcaatctttccacccaccacacctctggcaccaagt
acagccagtcttgtgatgtttaagttttcaccaagtacagccagtcttgtgaccagtaac
acaccgactactatgactgtaaacccagttatgtctctcaccagcactagtgtctccaac
gtcggtttcactggcacaactattggctcggctactaacactgcatcggtcatctccact
gcacctgtggtcaccaccgcagcatcctctccttcgctcagcccttcccccagcgcagtg
cagacgtcctccgcagagcaggcttcagctcaggagacggtgacggcagtaagtcaggca
ccttcctctctagcgtccactttgggcactgggcaggtgatggtggcggcacccagcctt
tcggctgctctgcaaggagccgcccagctgcctaccagcgccagcatcgctgccatggct
gcagccgctggcctcaatcctgggctcatggcatcctcacagttcactcctggcggagct
cttcttagtttggcaccaggtggtctcggaagcgctttgagtccagcactgatgagcaac
agcaccttggccacaatccaaggtgtgtggagcgctctggcatctggtggcactctgccc
attacatctctggacgggagcgggaactttctgtttgccaacaccagcgctggcagtacc
cctaacctcgtgacggcaccgctctttctgaaccctcagaacttgtcactgcttgccagt
aaccctgtcagcctagtgtctgcgggaggggctgcgggtgccggagcccttaacctgcac
atcaccgccgatgcccaccagagcgctgttactacggcaactatgcccgcctccaccatc
accacggcctctaaggcccagtga
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integrated database retrieval system
