Ctenopharyngodon idella (grass carp): 127518538
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Entry
127518538 CDS
T08802
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127518538
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127518538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
127518538
NCBI-ProteinID:
XP_051761295
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Position
9:complement(10846376..10871074)
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AA seq
1237 aa
AA seq
DB search
MPTIYGSKGKLASVCFMLQHASQDMTQSWPYQQPAGEGSNQHFLYSHSKEGKQHNSRHRH
VRDGVSMRMPSRPLVAPHKSMLADDLKLSSDEDDKDEGSERTTSWANNDRLSGQQQQHTH
THVGRVRHSSSGSSGSDPSSEWESSSQRSRSPSPGSHARCRTPTQQQTLNCSTETESPPS
TQWQLDRWLEKVPKKHQSTDHDPGGQRRSAKSDCGRGPSPGRYWGRDSESRRDYSPCDSP
VPSPKFDYSPRNSPRPSPEYSPCPSPGNSLVPSPVPSVCPSPGDSLRESRSPSPLFPHPP
RSPSPNLSSTPVPIQGTYPQVQSPQREIPRYISHPTVASNPPHRPKVRPWVPPDHSSDQR
KEFRPKDSRSRDSRAKDSRPCPPQQPHHSKHSSTEKLHKDLTHKPESKNSESTSKQRFNS
PSNPITKHSLKQRPHVSPKPQARHSSTTDHSIEHNHRSNEPTGASNHSSTPKSGHSSHLN
TLKSSDRGPSSKSRDSSQSEVNSRYSHSSSKSKSFPDTKQSSSKQTSQPHSSPKRRVKLG
DNPVPRTGHSLKEPKPREREREVDSRGKAQGVTLVPTGKEQRQRILAEEQVIRRRWVRSS
EEEEDEDDRRTEEGERERKRRRRREQEAEWKAVQPKQRPHTNSQHHTQQECNGLNLEEQR
RKKKRWSNDDISSHPHLIDSSPSPPLSPPSPTPVVKPTRPSSSSSSSSSSSSSSSSESDS
ESSPPRNVAKVPADSTSNQKTVPKRRHDKQGSGTGAHPHGSNLSTPETDKQVRGRHKLYT
LVPFGRSEKSPTVAHRGLKKLVVRIDLSLLGRVPSADEITKGQSSSSSLSSGKAKEKTLM
KQLHHSDQLPGDGRSKRKAENGDAQRENKRNHSHADKLPPSVHNESEETCADNKQNGCQD
DYFYSKRPVSPLSPPSDILELSKPSVKAQHAENYRTPTGKDNDSTAQKTQVQKTQPKVEV
ECVGVSGHLQPLSGSRGPPPNLPLHYRGTVPISDVSHHAEYYMHEAKRLKHRADAMVDKL
GKAVNYVDAALSFMECGKAMEEGPLESKSPYTMYAETVELIRYAMRLKSHAGPGASQEDK
QLAVLCFRCLALLYWQMFRLKKDHALKYSKVLLDYFKSSPKGPHKPLWNDAGKGTVPPAS
ICSVNIMGSHTGSSPSSVISIPHRIHQMAANHLNITNSVLYSYEYWEVADTLAKENKEFF
NYLNTLTGPLTLHSSMAHIVQYTRQGLQWIRISANLS
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccatttatggaagtaagggaaaacttgcaagtgtttgtttcatgcttcagcac
gcatcccaggacatgacccagtcctggccttaccagcagcccgcaggggaagggagcaat
cagcatttcctgtactcgcactcaaaggagggaaaacagcacaattcacgacacagacat
gtgagggatggtgtctctatgaggatgccctcacgtccactcgtggcccctcataaatcc
atgctcgctgatgacctgaagctcagcagtgatgaagatgacaaggacgagggaagtgag
cgaacaacttcctgggccaataatgaccgcttgtcaggccagcagcagcaacacacacac
acacatgttggaagggtgagacattctagctcagggtcttcaggatcagacccctccagc
gagtgggaaagcagcagccagcgatcacgcagcccgagcccagggtcgcacgcccggtgc
aggacaccgacccaacagcagaccctaaactgcagcacagagacggagagtccaccatcc
acacagtggcaactggacaggtggcttgagaaagtccctaaaaagcatcagtcgactgac
cacgacccaggaggacagcgacgaagtgcaaaatctgactgtggccgaggaccatcacct
ggaagatactggggcagagactctgagtcaagacgggattatagtccttgtgatagtccg
gttccaagtccaaaatttgactacagccccagaaacagtcctcgtcccagcccagaatac
agtccatgtcccagtccaggaaatagccttgtgccaagcccagtgccaagtgtgtgccca
agtccaggagacagtctccgagagagtcgaagtccaagccctttatttccgcaccctccc
agaagcccaagtccaaatctctcatccaccccagtacctatccaaggtacatatcctcag
gtacagtcacctcaacgggaaattcctagatatatttcacatccaacagttgcctccaat
ccaccacatcgtcccaaagtcaggccatgggtgcctccagaccatagctccgaccagaga
aaggaatttagacccaaagactctagatccagagactctcgagccaaagactccagacct
tgtcctcctcaacaaccccatcattccaaacacagctcaacagaaaagttacacaaagat
ctcacacacaagcctgaatccaaaaactctgaatccacaagcaagcaaaggtttaactca
ccttcgaacccaattacaaagcattcgttgaagcaaaggccacatgttagcccaaaacca
caagccaggcactcatctacaactgaccatagtattgaacataatcacagaagcaatgaa
cctacaggagcatcaaaccacagttcaacccccaaatcggggcattcatctcatttaaat
actctaaagagctcagaccgtggtccttcgtcaaagtccagggactcttcccaaagcgaa
gtcaacagtcgatatagtcacagcagctctaagagtaaatctttcccagacaccaagcaa
tccagctctaaacagacttcccaaccacattccagcccaaagcgcagggtcaaactaggg
gacaacccggtgcccagaactgggcactccctaaaagagccaaagcccagagagagagag
cgggaggtggacagccgaggtaaggcccagggagtgactctggtgccaactggcaaggag
cagagacaaagaatactggcggaagagcaagtaataaggcgccgctgggttcggagttct
gaggaagaggaagacgaggacgataggagaactgaggaaggggaaagagagaggaagcgg
agaaggagaagggagcaggaagctgaatggaaggcggtacagcccaagcaaagacctcac
accaacagccagcatcacactcaacaggaatgcaacggactcaaccttgaggagcagagg
aggaagaagaaaaggtggagcaacgatgacatttcctcacatcctcatttgatagactct
agcccttctcctccactctctccaccttcaccgactcctgtcgtcaagcccactcgtcca
tcgtcttcctcatcctcatcctcctcatcgtcctcctcatcttcctctgaatcagactct
gagtccagtccaccccggaacgttgccaaagtccctgcagattcaacatcaaaccaaaaa
actgttccaaagaggaggcatgacaaacagggttctggcactggtgctcacccccacggc
tcgaacttaagcacccctgaaacagacaaacaagtccggggcaggcacaaactctataca
ctggttcctttcggccgatctgagaagtcccccaccgtcgcacatcgaggcctgaaaaaa
cttgttgtgaggatagacctctcacttctgggtagagtacctagtgcagatgagattact
aagggacagtcctcgtcttcatctttgtcatcgggaaaggcaaaagaaaagacattgatg
aagcaactgcaccactctgaccaactgcccggagatggcagaagtaaaagaaaagctgag
aatggagatgctcaaagagaaaataagagaaatcactctcatgcagataaactcccaccg
tcagtccataatgagtctgaggaaacctgcgctgacaacaaacaaaacggatgtcaggac
gattacttttactccaaaaggccagtgtcgccattgtctcctccatctgacatactagag
ctctcaaagccctctgtgaaagctcagcatgcagagaattaccgcacacctacaggaaaa
gacaatgattcaacagcacagaaaacacaggtccagaagacgcagcccaaggtagaagtg
gagtgtgttggggtgtcaggacacctacagcctctatctggatctcggggtcctcctcca
aaccttccacttcactacagaggaaccgtacctatcagtgatgtctctcatcatgctgag
tactacatgcatgaggccaagaggctgaaacatcgagcagacgcaatggtggataagtta
ggaaaagctgtgaattatgtggatgctgctttgtccttcatggagtgtggtaaagccatg
gaagagggaccgttggagtccaagtccccctacaccatgtatgctgaaactgtggagctc
ataagatacgctatgagacttaagagtcacgcaggccctggagccagccaggaagacaaa
cagctagctgtactgtgtttccgctgtcttgctcttctttattggcaaatgttcagactt
aaaaaggaccacgctctgaaatactctaaagttctgctggactacttcaagagttctcca
aaaggacctcacaaacccctttggaacgatgctggaaagggaactgtgcctcctgcctct
atttgttctgtcaatataatgggatctcacacaggcagctcaccaagtagtgtcattagc
attccccaccgtatccaccagatggcagcaaatcacctcaacatcaccaacagtgtcctg
tacagttatgagtactgggaggtggctgataccctggccaaggaaaataaggaatttttc
aactatctgaacacactgactggacccttgactctgcatagcagcatggcccatatcgtc
cagtacaccaggcaagggctgcagtggattcggatcagtgctaatctatcataa
DBGET
integrated database retrieval system
