KEGG   Ctenopharyngodon idella (grass carp): 127518564
Entry
127518564         CDS       T08802                                 
Name
(RefSeq) desmin a isoform X1
  KO
K07610  desmin
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04519  Cadherin signaling
cide04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cide00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    127518564
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127518564
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cide04812]
    127518564
Cytoskeleton proteins [BR:cide04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     127518564
SSDB
Motif
Pfam: Filament Filament_head DUF8429 ZK652 Mis14 PMD1-like DUF7491 DUF4200 CCDC192 KASH_CCD CCDC89 Baculo_PEP_C ABATE AAA_13 Mua CCDC57_N bZIP_1 KIF21A_4th CLIP1
Other DBs
NCBI-GeneID: 127518564
NCBI-ProteinID: XP_051761358
LinkDB
Position
9:24436894..24445108
AA seq 483 aa
MSKTYSTSAETASSYRRTFGSGLSSSIFAGRGSAGSSRMSSRVYEVSKSSASPIYSSHRV
SSSSLGGGSMVRSYAGLGEKLDFNLADAMNQDFLNTRTNEKAELQHLNDRFASYIEKVRF
LEQQNQALTVEIERMRGREPTRIAEMYEEEMRELRRQVDALTNQRSRVEIERDNLADDLQ
KLKQRLQEEIHQKEEAENNLSAFRADVDAATLSRLDLERRIEGLHEEIAFLKKVHEEEIR
ELQNQMQESQVQIQMDMSKPDLTAALRDIRLQYEGIAAKNISEAEEWYKSKVSDLNQAVN
KNNDALRQAKLETMEFRHQIQSYTCEIDSLKGTNESLMRQMREMEERLGREAGGYQDTIA
RLESEITKMKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRISLPVQSFSSLNF
RETSPEQHHQQQQRASEVHSKKTVLIKTIETRDGESRTASEGMSALSAQCVVSESTQHQQ
DIM
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgagcaaaacatattcaacttctgccgagacggcttcctcctaccgccgtaccttcggc
tctggtctgagctcctccattttcgctggccgtggttctgctgggtcctctcgtatgtct
tccagagtttatgaggtgagcaagagctccgcttctcccatttattccagccaccgcgta
tccagctcttccttgggtggtggctcaatggtccgttcctatgccggtcttggcgagaag
ctggacttcaatctggccgacgccatgaaccaggacttcctcaatacacgcactaatgag
aaggcagagctgcaacatctcaatgaccgttttgccagctacatcgagaaggtgcgcttc
ctggagcagcagaaccaagcgttgacggtggagattgagcgtatgcggggccgcgagccc
acgcgtatcgcagagatgtatgaagaggagatgagagaactacgcagacaggtggacgca
ctgaccaatcagaggtctcgtgttgagatagagagagacaacctggccgatgacctacag
aaactaaaacagagacttcaagaggagatccaccagaaagaagaagctgagaacaacctc
tctgcttttagagctgatgtagatgctgccactctgtccaggctggacctggaaagacgt
atcgagggccttcatgaagagattgcattcctcaagaaagtccatgaggaggagatccgc
gagctgcaaaaccagatgcaggagagtcaggtgcagatccaaatggacatgtccaagcct
gacctgaccgccgccctgagggacatccgcctgcagtacgagggtattgctgccaagaat
atctcagaggctgaggaatggtataagtctaaggtgtcagatctgaaccaggcagtaaac
aagaataatgacgctctcagacaagccaagctggagaccatggagttccgtcaccagatc
cagtcctacacttgtgagattgactctctcaagggcaccaatgagtctctgatgaggcaa
atgagggagatggaggaacggttgggtcgtgaggccggaggttatcaggacaccattgct
cgtcttgagagtgagatcacaaaaatgaaggatgagatggctcgccacctccgtgagtac
caggatctgctgaatgttaagatggcacttgatgtggagatcgccacctacaggaagctt
ctggaaggagaggagagcagaatctctctccctgtgcagtccttttcttccttgaatttc
agagagaccagccccgagcagcaccaccagcaacaacagagagcatctgaagtccactct
aagaaaacagttctgatcaagaccattgagacccgggatggcgagagtaggacggctagt
gagggcatgagcgccctcagtgctcagtgtgtcgtcagtgagtccacacagcaccagcag
gacatcatgtaa

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