KEGG   Ctenopharyngodon idella (grass carp): 127518571
Entry
127518571         CDS       T08802                                 
Name
(RefSeq) alsin isoform X1
  KO
K04575  amyotrophic lateral sclerosis 2 protein
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cide03036]
    127518571
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    127518571
SSDB
Motif
Pfam: RCC1 MORN RCC1_2 VPS9 PH RhoGEF
Other DBs
NCBI-GeneID: 127518571
NCBI-ProteinID: XP_051761386
LinkDB
Position
9:23278292..23304708
AA seq 1683 aa
MLMEEQSSSGEDEGSREKGVLYRWQGYFCSVTPERLLLSRPVLHAALGTLHGLLLTEDGH
VYSIGEQPWKRVSSQPTGPVLESALKEQHVISVSAGSFHSSAVTEDGLVHMWGENSHGQC
GISGIDQVPNPTPVSVVDGETHPPQLVQVLNVACGAQHTLALSRKHEVWAWGSGCQLGLV
TNIFPVWTPQKVEHLVGRYVVQIACGGFHSLALAQFLPSQEASQQAQDRCGQCKKNLYTM
TEKDDHVIISDEHYCPLGVELADSKQGRRSGQSSPAQTPQTKNSSPNSQVSPLTLKNTCA
GQGSSFESQQSTTSQETQLDLAVSEAGNVRLRRTKSTPYPDEQALKDYLKRISDQTLAEQ
ADATSVGGSHPPSRQSSLTCPFRSNQSDELTLRPSSPTLSRPDGITPSARQRSASDSVTD
RKHSLHFLPTLDSTSDDSSQHSSVDGGICLSELLISNGCLFESCEEGVETAGMDFCPANS
LQSKKSTSLTDITLVDAEAHARRGSFPGFSPVSPSDSHRTNSLRGAVTTSSTSESRNLLP
SLYTEVWSWGRGQEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYS
WGSDKFGQLGHMNAPCTVPNLIMVSDGIRVWDVAAGQTHTLLLADGDCYQPILYYSGEQV
LENTDSAHPLSGTYTQTPTLLPFCMNIGYVSQVFGGGLNCLALADQNAMGFIATVHELAS
AERKFYCILSKVKSQILSPLLARASLALSLGQSSMLLFQEMAGSFSKLCHLTGQHSASLT
NFLQRGKVIKTLVLIKNTAIFIDTYKEYSDPVGNFLVMGGFQSLLKPSQELFGKKLELIQ
SLLESKEKNPSPCDLLVSLFYMPLQHLHGYNRLLLKLANCFEVNTEEYQWIQNGCSKYEA
LARLVSKQRKDAEATFNFWKNFKGKNSESLRKPSRRLVCESSNKALTLQNAGRFSASWFI
LFSDVLVHAQGTIPSKKLFSSHYVYPLATLWVEPISDESLGLLALKLTTPEDSFVVLASS
PLEKGKWLRAINQAIDDVLAAGLNRRTRGSRSSQNGDPPVSRTSTYTFSKEGRLKDALYE
GRWLSGKPHGKGILKWPDGTVYCGTFKNGLEDGFGDYMMPNTTLNKFERYQGHWKEGKMH
GFGTYWHASGEVYEGSFRENMRHGHGMLRSGKLASPSSSSVFVGQWVQGKRTGYGVCDDF
SSGEKYMGIWLDDQRHGDGVVITQFGLYYEGNFSNNKMMGNGTLLCDDDTVFEGEFSEDW
TLCGKGVLFMPNGDSLDGVFDGHWGTGLRVAGTFTKPFETLRREVKMPVAGQHAVPAEEK
WKAVFEECWGRLGCETPEQGVYEKAWENIAISLTARRRQQRDRPEELSRSQTKMLESLEV
IPQHVGPVTADSYNNIRRYLMKACDTPLHPLGWLLETLVTVYRMTYVGVGSNRRLLQQAV
EEIQSYLTRIFQIVRFLFPGLPEDGGFILDSSTSSDEGTDSLNSSIHSETPQHGWIVSSS
SLLLPVLLPRLYPPLFTLYTLEKEREEEVYWNCVLRLNKQPDLALLAFLGVQQKFWPDSI
SVLGEIKQVLPSTKDACFATAVETLQQISTAFTPSDKLQVIQLTFEEVTQEVQALLGQEF
LWCMDDLFPIFLYVVLRARIRNLGSEVSLIEDLTDSSLQLGQLGFMLTTLKACYNQIQLE
KTT
NT seq 5052 nt   +upstreamnt  +downstreamnt
atgctcatggaggaacagagcagctctggagaagatgagggctctagagagaaaggtgtg
ctctacagatggcagggctatttctgcagtgtaaccccagagagactgcttctgtccagg
cctgtgcttcatgctgcactggggactttacatggacttctgctgacagaagatgggcat
gtgtatagtataggcgagcagccatggaaacgagtcagttctcagcctaccggccctgtt
ttagagagcgcactgaaggaacagcatgtgatctctgtgtcggcgggcagctttcactct
tctgctgtaacagaggatggcctcgtccacatgtggggtgagaactcccacggccagtgt
ggcatctctggaatagaccaagtacccaatcccactcccgttagtgtggtggatggtgag
acccatcctccgcaactggtccaagtcctaaatgtagcctgcggagcgcagcacactttg
gccctgtcaagaaagcatgaggtgtgggcctggggtagtggctgccagctgggactggtt
accaacatattcccggtatggacaccccagaaggtggagcatttagtgggaagatatgtg
gttcagatcgcttgtggtgggtttcacagcctggctctggctcagtttcttccttcacaa
gaggccagtcagcaagctcaggatagatgtgggcagtgtaagaagaacctttacaccatg
actgaaaaggatgaccatgttattatttcggatgagcattactgtccacttggagtggaa
ctggctgattctaaacaaggtcggaggtcaggacaaagctctccagctcagacaccacaa
accaaaaactcctcgcccaactcccaagtatccccattgaccttgaagaacacgtgtgca
ggtcagggatcctcattcgaatctcagcaaagtactacaagccaggagactcaactagac
cttgctgtatctgaggctgggaatgtacgtctacgacgaaccaaaagcactccttaccct
gatgagcaggctctgaaagactacctcaaaaggatttcggaccagaccctcgctgagcag
gctgacgctacctctgtgggaggttcccatcctccgagccgccagtcatctctcacgtgt
cctttccgatcaaaccaaagtgatgagcttacactacgtccctcttcaccaacactgagc
agacctgatgggatcacaccttctgccagacaacgcagtgcatcagatagtgtcacagac
cggaagcactctctccattttttaccaacactggattccacttctgatgattcttcacag
cactcaagtgtggatggaggcatttgcctcagtgagcttttaatcagcaatggatgttta
tttgagtcctgtgaggagggcgtagagactgctggaatggacttctgtccagccaattct
ctgcaaagtaagaagagcaccagtctgacggacatcacattagtggatgctgaagcacat
gctcgcagagggtcttttcctggcttctctccagtgtcgccttctgacagtcatcgaacc
aacagtttgagaggtgctgtgacaacttcttctacctcagaatccagaaatctccttcct
tccctctacactgaggtgtggagttgggggaggggccaggaaggtcagctaggtcatgga
gactatttacccaggttacagcctctctgcattaagagtttaagtaaaaaggaagttgtc
aagatcactgctggagcaaatcactctttggcactgacagctcagtgtcaggtttattcc
tggggaagtgacaaatttggccagctgggtcatatgaatgctccctgcacagttcctaat
ctcatcatggtctctgacggtatccgtgtgtgggacgtggcagcagggcaaacgcacact
ttgctgctggctgatggagactgttatcagcccattctctattacagcggagagcaggtg
ctggagaacactgacagtgctcatcccctctccgggacctacacccagacgcccaccctt
ctgcccttctgcatgaatattggctatgtgagccaagtgtttggaggaggattgaattgt
ttggccttggctgatcagaacgcaatgggtttcatagcgacagtccacgagctcgcttcg
gcagagaggaaattctactgcatcctcagcaaggtgaagagccaaatcctaagccccctg
ctagctcgtgcgagtttggcattgtctctgggacagtcctccatgttgctgtttcaagag
atggctggtagtttcagcaagctttgccatctgacaggacagcactcagcatccctcact
aacttcctgcagcgaggcaaagtgatcaaaacactggtcttaatcaagaacacagccatt
ttcattgacacctataaagagtacagcgatccagtgggaaactttcttgttatgggagga
ttccagtcattgctgaaaccctcacaagaattatttggaaagaaactggagttgatacag
tctctgctagagtccaaggagaagaacccatcaccctgtgatctgttagtcagcttgttt
tatatgcccttgcagcacctgcatgggtataacagattacttctgaaactagccaactgc
ttcgaagtgaacactgaggaataccagtggattcaaaatggctgctccaaatatgaagct
ttagctcgccttgtcagcaagcagagaaaagatgctgaggccactttcaatttctggaag
aacttcaaaggaaagaattcggaatccctgcgtaagccatctcgtcgtctggtttgtgag
agcagtaataaagctctgacgttacagaacgctggaagattctctgccagctggttcatc
ctcttcagtgatgtcctagttcatgcacagggcactattccatcaaagaagcttttctca
tctcactatgtctacccacttgctacactctgggtggagcctatctcagatgaaagtttg
ggcctacttgcccttaagctgaccacacctgaagatagctttgttgttctggcatcttct
cctctggaaaagggaaagtggctgagagccattaaccaggccattgatgacgtgcttgct
gcaggccttaacaggaggacacgtgggtctagaagtagccagaatggagatcctcctgtg
tcacgtacttccacctacactttcagcaaagagggccgacttaaggatgctttgtatgag
ggccgctggctatcaggcaaacctcacggcaaggggattctgaagtggccagatgggaca
gtatactgtgggacattcaagaacgggttggaggatggatttggagattatatgatgccc
aacacaaccctcaacaagtttgagcgttaccaaggtcactggaaggaggggaaaatgcat
ggctttggcacatactggcatgcttcaggtgaggtatacgagggctcgttcagggagaac
atgcgtcatggtcacggcatgttacggagtgggaagttggcctctccctcctccagtagt
gtgtttgtgggtcagtgggttcaagggaagagaacaggctatggggtgtgcgatgacttc
agcagtggagagaaatacatgggaatatggcttgatgaccagcgacatggagacggggtc
gttatcactcagtttggattgtattatgaaggaaacttctctaataacaagatgatgggc
aatgggactcttctctgtgatgatgacacagtctttgagggcgagttttcagaagactgg
actctgtgtggaaagggtgttcttttcatgcctaatggtgactctttggatggggtcttt
gatggtcactggggaaccggtctgagagtggctggaacttttacaaaaccctttgaaact
ttgaggagagaagtcaagatgcctgtggctggtcaacacgcagtgcctgcagaagaaaag
tggaaagccgtgtttgaggagtgctggggccgacttggctgtgaaactcctgagcaggga
gtgtatgagaaagcctgggagaacattgccatctccctcactgccagacgcagacaacag
agagatcgtccagaggagctgagccgatctcagactaagatgctggagagtcttgaggtg
attcctcaacatgtgggccctgttactgcagactcctacaacaacatccgtcgttatctc
atgaaggcctgtgatacccctctgcacccactgggctggctgctggagaccctcgtcact
gtgtacaggatgacctatgttggcgtgggctccaatagacgcctcctacagcaggcagta
gaggagatccagtcatatctaacacgcatattccaaatagtcaggtttctgtttcctggc
ctccccgaggatggaggttttattctagattcctccacttcctcagatgagggcacagac
tctcttaacagcagtatacactcagaaactccacagcatggttggatagtgagcagctca
agtcttctcctgccggtgttgctgccgaggctttaccctcctctcttcaccctctacaca
ctagagaaagagagagaggaggaagtgtactggaactgtgtgttaagactcaacaaacaa
cctgatctcgccctcctagccttccttggagtacaacaaaaattctggccagattctatc
tctgttttgggagagataaagcaggtcttgcctagtactaaagatgcctgctttgctact
gctgttgaaaccctgcagcagatcagcacagcattcactccctcagacaagttacaggtg
atacagctgacctttgaggaggtcacccaggaagtgcaggctctgcttgggcaggagttt
ctgtggtgcatggatgacctctttccaattttcctctatgtggtgctccgcgcacggatc
agaaacctgggctctgaagtcagtctgatagaggaccttacagactccagtctacagctg
ggacagcttgggttcatgttgacaactctcaaagcctgctacaaccagattcagcttgag
aagactacatag

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