Ctenopharyngodon idella (grass carp): 127518571
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Entry
127518571 CDS
T08802
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127518571
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
127518571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
MORN
RCC1_2
VPS9
PH
RhoGEF
Motif
Other DBs
NCBI-GeneID:
127518571
NCBI-ProteinID:
XP_051761386
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All DBs
Position
9:23278292..23304708
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AA seq
1683 aa
AA seq
DB search
MLMEEQSSSGEDEGSREKGVLYRWQGYFCSVTPERLLLSRPVLHAALGTLHGLLLTEDGH
VYSIGEQPWKRVSSQPTGPVLESALKEQHVISVSAGSFHSSAVTEDGLVHMWGENSHGQC
GISGIDQVPNPTPVSVVDGETHPPQLVQVLNVACGAQHTLALSRKHEVWAWGSGCQLGLV
TNIFPVWTPQKVEHLVGRYVVQIACGGFHSLALAQFLPSQEASQQAQDRCGQCKKNLYTM
TEKDDHVIISDEHYCPLGVELADSKQGRRSGQSSPAQTPQTKNSSPNSQVSPLTLKNTCA
GQGSSFESQQSTTSQETQLDLAVSEAGNVRLRRTKSTPYPDEQALKDYLKRISDQTLAEQ
ADATSVGGSHPPSRQSSLTCPFRSNQSDELTLRPSSPTLSRPDGITPSARQRSASDSVTD
RKHSLHFLPTLDSTSDDSSQHSSVDGGICLSELLISNGCLFESCEEGVETAGMDFCPANS
LQSKKSTSLTDITLVDAEAHARRGSFPGFSPVSPSDSHRTNSLRGAVTTSSTSESRNLLP
SLYTEVWSWGRGQEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYS
WGSDKFGQLGHMNAPCTVPNLIMVSDGIRVWDVAAGQTHTLLLADGDCYQPILYYSGEQV
LENTDSAHPLSGTYTQTPTLLPFCMNIGYVSQVFGGGLNCLALADQNAMGFIATVHELAS
AERKFYCILSKVKSQILSPLLARASLALSLGQSSMLLFQEMAGSFSKLCHLTGQHSASLT
NFLQRGKVIKTLVLIKNTAIFIDTYKEYSDPVGNFLVMGGFQSLLKPSQELFGKKLELIQ
SLLESKEKNPSPCDLLVSLFYMPLQHLHGYNRLLLKLANCFEVNTEEYQWIQNGCSKYEA
LARLVSKQRKDAEATFNFWKNFKGKNSESLRKPSRRLVCESSNKALTLQNAGRFSASWFI
LFSDVLVHAQGTIPSKKLFSSHYVYPLATLWVEPISDESLGLLALKLTTPEDSFVVLASS
PLEKGKWLRAINQAIDDVLAAGLNRRTRGSRSSQNGDPPVSRTSTYTFSKEGRLKDALYE
GRWLSGKPHGKGILKWPDGTVYCGTFKNGLEDGFGDYMMPNTTLNKFERYQGHWKEGKMH
GFGTYWHASGEVYEGSFRENMRHGHGMLRSGKLASPSSSSVFVGQWVQGKRTGYGVCDDF
SSGEKYMGIWLDDQRHGDGVVITQFGLYYEGNFSNNKMMGNGTLLCDDDTVFEGEFSEDW
TLCGKGVLFMPNGDSLDGVFDGHWGTGLRVAGTFTKPFETLRREVKMPVAGQHAVPAEEK
WKAVFEECWGRLGCETPEQGVYEKAWENIAISLTARRRQQRDRPEELSRSQTKMLESLEV
IPQHVGPVTADSYNNIRRYLMKACDTPLHPLGWLLETLVTVYRMTYVGVGSNRRLLQQAV
EEIQSYLTRIFQIVRFLFPGLPEDGGFILDSSTSSDEGTDSLNSSIHSETPQHGWIVSSS
SLLLPVLLPRLYPPLFTLYTLEKEREEEVYWNCVLRLNKQPDLALLAFLGVQQKFWPDSI
SVLGEIKQVLPSTKDACFATAVETLQQISTAFTPSDKLQVIQLTFEEVTQEVQALLGQEF
LWCMDDLFPIFLYVVLRARIRNLGSEVSLIEDLTDSSLQLGQLGFMLTTLKACYNQIQLE
KTT
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggaggaacagagcagctctggagaagatgagggctctagagagaaaggtgtg
ctctacagatggcagggctatttctgcagtgtaaccccagagagactgcttctgtccagg
cctgtgcttcatgctgcactggggactttacatggacttctgctgacagaagatgggcat
gtgtatagtataggcgagcagccatggaaacgagtcagttctcagcctaccggccctgtt
ttagagagcgcactgaaggaacagcatgtgatctctgtgtcggcgggcagctttcactct
tctgctgtaacagaggatggcctcgtccacatgtggggtgagaactcccacggccagtgt
ggcatctctggaatagaccaagtacccaatcccactcccgttagtgtggtggatggtgag
acccatcctccgcaactggtccaagtcctaaatgtagcctgcggagcgcagcacactttg
gccctgtcaagaaagcatgaggtgtgggcctggggtagtggctgccagctgggactggtt
accaacatattcccggtatggacaccccagaaggtggagcatttagtgggaagatatgtg
gttcagatcgcttgtggtgggtttcacagcctggctctggctcagtttcttccttcacaa
gaggccagtcagcaagctcaggatagatgtgggcagtgtaagaagaacctttacaccatg
actgaaaaggatgaccatgttattatttcggatgagcattactgtccacttggagtggaa
ctggctgattctaaacaaggtcggaggtcaggacaaagctctccagctcagacaccacaa
accaaaaactcctcgcccaactcccaagtatccccattgaccttgaagaacacgtgtgca
ggtcagggatcctcattcgaatctcagcaaagtactacaagccaggagactcaactagac
cttgctgtatctgaggctgggaatgtacgtctacgacgaaccaaaagcactccttaccct
gatgagcaggctctgaaagactacctcaaaaggatttcggaccagaccctcgctgagcag
gctgacgctacctctgtgggaggttcccatcctccgagccgccagtcatctctcacgtgt
cctttccgatcaaaccaaagtgatgagcttacactacgtccctcttcaccaacactgagc
agacctgatgggatcacaccttctgccagacaacgcagtgcatcagatagtgtcacagac
cggaagcactctctccattttttaccaacactggattccacttctgatgattcttcacag
cactcaagtgtggatggaggcatttgcctcagtgagcttttaatcagcaatggatgttta
tttgagtcctgtgaggagggcgtagagactgctggaatggacttctgtccagccaattct
ctgcaaagtaagaagagcaccagtctgacggacatcacattagtggatgctgaagcacat
gctcgcagagggtcttttcctggcttctctccagtgtcgccttctgacagtcatcgaacc
aacagtttgagaggtgctgtgacaacttcttctacctcagaatccagaaatctccttcct
tccctctacactgaggtgtggagttgggggaggggccaggaaggtcagctaggtcatgga
gactatttacccaggttacagcctctctgcattaagagtttaagtaaaaaggaagttgtc
aagatcactgctggagcaaatcactctttggcactgacagctcagtgtcaggtttattcc
tggggaagtgacaaatttggccagctgggtcatatgaatgctccctgcacagttcctaat
ctcatcatggtctctgacggtatccgtgtgtgggacgtggcagcagggcaaacgcacact
ttgctgctggctgatggagactgttatcagcccattctctattacagcggagagcaggtg
ctggagaacactgacagtgctcatcccctctccgggacctacacccagacgcccaccctt
ctgcccttctgcatgaatattggctatgtgagccaagtgtttggaggaggattgaattgt
ttggccttggctgatcagaacgcaatgggtttcatagcgacagtccacgagctcgcttcg
gcagagaggaaattctactgcatcctcagcaaggtgaagagccaaatcctaagccccctg
ctagctcgtgcgagtttggcattgtctctgggacagtcctccatgttgctgtttcaagag
atggctggtagtttcagcaagctttgccatctgacaggacagcactcagcatccctcact
aacttcctgcagcgaggcaaagtgatcaaaacactggtcttaatcaagaacacagccatt
ttcattgacacctataaagagtacagcgatccagtgggaaactttcttgttatgggagga
ttccagtcattgctgaaaccctcacaagaattatttggaaagaaactggagttgatacag
tctctgctagagtccaaggagaagaacccatcaccctgtgatctgttagtcagcttgttt
tatatgcccttgcagcacctgcatgggtataacagattacttctgaaactagccaactgc
ttcgaagtgaacactgaggaataccagtggattcaaaatggctgctccaaatatgaagct
ttagctcgccttgtcagcaagcagagaaaagatgctgaggccactttcaatttctggaag
aacttcaaaggaaagaattcggaatccctgcgtaagccatctcgtcgtctggtttgtgag
agcagtaataaagctctgacgttacagaacgctggaagattctctgccagctggttcatc
ctcttcagtgatgtcctagttcatgcacagggcactattccatcaaagaagcttttctca
tctcactatgtctacccacttgctacactctgggtggagcctatctcagatgaaagtttg
ggcctacttgcccttaagctgaccacacctgaagatagctttgttgttctggcatcttct
cctctggaaaagggaaagtggctgagagccattaaccaggccattgatgacgtgcttgct
gcaggccttaacaggaggacacgtgggtctagaagtagccagaatggagatcctcctgtg
tcacgtacttccacctacactttcagcaaagagggccgacttaaggatgctttgtatgag
ggccgctggctatcaggcaaacctcacggcaaggggattctgaagtggccagatgggaca
gtatactgtgggacattcaagaacgggttggaggatggatttggagattatatgatgccc
aacacaaccctcaacaagtttgagcgttaccaaggtcactggaaggaggggaaaatgcat
ggctttggcacatactggcatgcttcaggtgaggtatacgagggctcgttcagggagaac
atgcgtcatggtcacggcatgttacggagtgggaagttggcctctccctcctccagtagt
gtgtttgtgggtcagtgggttcaagggaagagaacaggctatggggtgtgcgatgacttc
agcagtggagagaaatacatgggaatatggcttgatgaccagcgacatggagacggggtc
gttatcactcagtttggattgtattatgaaggaaacttctctaataacaagatgatgggc
aatgggactcttctctgtgatgatgacacagtctttgagggcgagttttcagaagactgg
actctgtgtggaaagggtgttcttttcatgcctaatggtgactctttggatggggtcttt
gatggtcactggggaaccggtctgagagtggctggaacttttacaaaaccctttgaaact
ttgaggagagaagtcaagatgcctgtggctggtcaacacgcagtgcctgcagaagaaaag
tggaaagccgtgtttgaggagtgctggggccgacttggctgtgaaactcctgagcaggga
gtgtatgagaaagcctgggagaacattgccatctccctcactgccagacgcagacaacag
agagatcgtccagaggagctgagccgatctcagactaagatgctggagagtcttgaggtg
attcctcaacatgtgggccctgttactgcagactcctacaacaacatccgtcgttatctc
atgaaggcctgtgatacccctctgcacccactgggctggctgctggagaccctcgtcact
gtgtacaggatgacctatgttggcgtgggctccaatagacgcctcctacagcaggcagta
gaggagatccagtcatatctaacacgcatattccaaatagtcaggtttctgtttcctggc
ctccccgaggatggaggttttattctagattcctccacttcctcagatgagggcacagac
tctcttaacagcagtatacactcagaaactccacagcatggttggatagtgagcagctca
agtcttctcctgccggtgttgctgccgaggctttaccctcctctcttcaccctctacaca
ctagagaaagagagagaggaggaagtgtactggaactgtgtgttaagactcaacaaacaa
cctgatctcgccctcctagccttccttggagtacaacaaaaattctggccagattctatc
tctgttttgggagagataaagcaggtcttgcctagtactaaagatgcctgctttgctact
gctgttgaaaccctgcagcagatcagcacagcattcactccctcagacaagttacaggtg
atacagctgacctttgaggaggtcacccaggaagtgcaggctctgcttgggcaggagttt
ctgtggtgcatggatgacctctttccaattttcctctatgtggtgctccgcgcacggatc
agaaacctgggctctgaagtcagtctgatagaggaccttacagactccagtctacagctg
ggacagcttgggttcatgttgacaactctcaaagcctgctacaaccagattcagcttgag
aagactacatag
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integrated database retrieval system