KEGG   Ctenopharyngodon idella (grass carp): 127518618
Entry
127518618         CDS       T08802                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127518618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cide03041]
    127518618
   03036 Chromosome and associated proteins [BR:cide03036]
    127518618
Spliceosome [BR:cide03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    127518618
 Complex B
    127518618
 Complex C
   U2 SnRNP specific factors
    127518618
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    127518618
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central DUF2298
Other DBs
NCBI-GeneID: 127518618
NCBI-ProteinID: XP_051761507
LinkDB
Position
9:18811175..18821605
AA seq 1315 aa
MAQIAKTHDDIEAQILEIQGMKAALAEGVDQGVGLDSTGYYDQEIYGGSDSRFAGYVTSI
AANEQEEDDDEDSSTSLLGQKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKISDREDEY
KKRRQKMIISPERHDPFADGGKTPDPKMQVRTYMDVMKEQHLSKEEREIRLQMVEKAKSG
ELKAVNGSAASQAAVAKRKRRWDQTADQTPSNATPKKMSSWDQADASSETPGHTPGHTPS
NSRWDETPGRPKGSETPGATPSTRMWEPTPSHTPAGAATPGRDTPGHATPGHGGASSSVR
KNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPASQMGSS
TPLLTPGKTPLGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFP
EGYKVLPPPAGYVPIRTPARKLAATPTPIGGMTGFHMQTEDRSMKQVNDQPSGNLPFLKP
DDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAG
PLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYA
RVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLK
AVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAI
AALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREV
MLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRN
YRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLE
EQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQ
QAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKM
TPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAH
KKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVL
PALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTAS
AVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQY
CLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPLVFNDEKNSYVRYELDYFL
NT seq 3948 nt   +upstreamnt  +downstreamnt
atggcgcagatcgccaaaacacatgacgacatagaggctcagatcctggaaatccagggg
atgaaagccgccctggcagagggagttgaccagggagtcggccttgattccactggatat
tatgaccaggagatctacggaggcagtgacagccgctttgccggatatgtgacttcaatt
gctgccaacgagcaggaagaagatgatgatgaagattcttccacaagtctgcttggacaa
aagaaaccaggatatcatgcaccggttgcaattctcaattccattcctcagtcagatgag
cagtatgatccttttgctgaacacagaccacagaagatttcggaccgcgaggacgagtac
aagaaacgcagacaaaagatgatcatctccccagagcgtcacgacccgtttgctgatggg
ggcaaaacaccggaccccaagatgcaggtcaggacgtacatggatgttatgaaggagcag
catctgtccaaagaagagagagagatcaggctgcagatggtagagaaagcaaaatctgga
gagctgaaagcagtgaacggctctgctgcttctcaggctgctgtggccaaacgcaaacgt
cgctgggatcagacagccgaccaaacccccagcaacgccacacccaaaaaaatgtccagt
tgggaccaggcagatgcatcttctgaaacccccggacatacacccggacacacaccttcc
aacagtcgttgggacgagacaccaggccgtcccaaaggtagcgagaccccgggagccact
ccgagtacccgtatgtgggagcccacaccgagtcacaccccagctggagctgccacacct
ggtcgagacacccctggacatgccactcccggacatggaggggcctcttccagtgtgcgc
aagaaccgctgggacgagacaccaaagacagagagagagacacctggtcatggcagtggc
tgggctgagactccacgtacagatagaggagatgagtcagtgggtgagacgcccaccccg
ggtgcaagcaagaggaagtcaagatgggatgaaacaccagccagtcagatgggctcttca
actcctctgctcacccctggaaaaacacctctgggtacacctgccatgaatatggccacg
cccactccaggccacctgatgagcatgactccagaacagctgcaggcttggcgctgggag
cgagagattgatgagaggaaccgcccattgactgatgaggaactggatgccatgtttcca
gaaggatacaaagtgctgcccccaccagcaggctacgtgcccatccgcacccctgcgcgt
aagctagctgccactcccacccccatcggaggaatgactggcttccacatgcaaacagag
gacagatctatgaaacaagtcaatgaccagccctctggaaacctgcccttcctcaagcca
gatgacatccagtactttgacaaactgctggttgaagttgatgagtccaccctcagtcca
gaagaacagaaggagcgcaagatcatgaagctgcttctgaagatcaagaatggaacacct
cccatgagaaaggctgctcttcgtcaaatcacagataaggccagagagtttggtgcagga
cccctatttaaccagatcctgccactgctgatgtctcctactctggaggaccaagagcgt
catctattggtgaaagtcattgatcgtattctctacaaacttgatgacttggttcgacca
tacgtccacaagattcttgtggtgattgagcctttgctgattgatgaagattactatgct
agagtagagggtagagagatcatctccaacttggcaaaagctgccggtctggccaccatg
atctccaccatgaggcctgacattgacaacatggatgagtatgtgagaaatacgacagct
cgtgcttttgccgtcgttgcgtctgccctgggcattccatctctcctgcctttcctcaag
gctgtttgcaagagcaagaaatcctggcaggctcgtcacacaggcatcaagattgtacag
cagatcgctattctcatgggctgtgctatcctgccccatctccgcagcttggtggagatt
atcgagcatggtcttgtggatgagcagcagaaagtgcgaaccatcagtgctctggctatc
gctgccctggctgaagctgctacgccgtacggtatcgagtcctttgattctgtgctgaaa
cctctttggaaaggtatcaggcaacacagaggcaagggtcttgctgcctttttgaaagct
attggatacttgattcctctgatggatgctgaatatgccaactattacaccagagaagtg
atgcttatcctcatccgagagttccagtctcctgatgaggagatgaagaagattgtcctc
aaggtggtgaagcagtgctgtggcacagatggtgtggaagccaattacattaaaacagag
atcttgcctcccttctttaaacacttctggcagcacagaatggcattggatagacgcaac
tacagacagttagtggacactacagtggagctggccaataaggtaggcgcagctgagatt
atttcccgtatcgtggatgacttgaaggatgaagctgagcagtacagaaagatggtgatg
gagaccattgagaaaatcatgggcaaccttggtgctgctgacatcgatcacaaactggag
gagcagcttattgatggtatcctgtacgcctttcaggaacagaccactgaggactctgtg
atgctgaatggctttggtacggtggtgaatgctctgggtaagagagttaaaccgtacttg
cctcagatctgcggtacagtgctgtggcgtctcaacaacaaatccgccaaagtccgtcaa
caggccgctgacctgatttctcgcacagcggtggtcatgaagacatgccaagaggaaaag
ctcatgggccatttgggtgtggtgttgtacgagtatctgggagaagaatacccagaagtg
ctgggtagcattcttggagctcttaaagccatcgtcaatgtcattggtatgcacaagatg
accccacctatcaaagacctgcttccacgtttgactcccatcttgaagaacagacatgag
aaggtgcaggagaactgcattgatctagtgggcaggatcgctgacaggggtgcggagtac
gtgtctgccagggaatggatgcgaatctgttttgaattgctggagttgttgaaagcccac
aagaaggccatccgcagagctactgtcaacacttttggctacatcgccaaggccattggt
cctcatgatgtgctggccacactgctcaacaatctgaaggtgcaagagcgtcagaaccgt
gtgtgcacaacggtagccattgctattgtggccgagacgtgttcgccattcaccgtgctt
cctgcgttgatgaatgagtatcgtgttcctgagcttaacgttcagaacggtgtcctaaag
tctctgtccttcctctttgagtatattggtgaaatgggcaaagattatatctatgccgtc
acacctctgttggaggatgctctgatggatagggatctagtacacagacaaacagccagt
gctgtggtgcagcatatgtctctgggagtttatggctttggctgtgaagattctctcaat
catttgctcaactatgtttggcccaatgtcttcgaaacgtctcctcatgtcatccaagct
gtaatgggggccctcgagggtctgcgggtggcaattggaccttgccgcatgctgcaatat
tgcttacagggtttgttccatcctgctcgcaaagtgcgtgacgtgtactggaagatctac
aactccatctatatcggctcccaggatgcactgatcgcacattatcctcttgtcttcaac
gatgagaagaactcatatgttcgctatgagctggattacttcctgtga

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