Ctenopharyngodon idella (grass carp): 127518621
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Entry
127518621 CDS
T08802
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127518621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127518621
03110 Chaperones and folding catalysts [BR:
cide03110
]
127518621
03029 Mitochondrial biogenesis [BR:
cide03029
]
127518621
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127518621
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127518621
Messenger RNA biogenesis [BR:
cide03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127518621
Chaperones and folding catalysts [BR:
cide03110
]
Heat shock proteins
HSP60 / Chaperonin
127518621
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127518621
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127518621
Exosomal proteins of other body fluids (saliva and urine)
127518621
Exosomal proteins of breast cancer cells
127518621
Exosomal proteins of colorectal cancer cells
127518621
Exosomal proteins of bladder cancer cells
127518621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
127518621
NCBI-ProteinID:
XP_051761516
LinkDB
All DBs
Position
9:18789536..18797703
Genome browser
AA seq
575 aa
AA seq
DB search
MLRLPSVMKQMRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIELKDRYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RAVAKEGFDTISKGANPVEIRRGVMMAVEEIINELKKLSKPVTTPEEIAQVATISANGDT
EVGNIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLQDMAVSTGGTVFGDEAMGLAIEDIQAHDFGRVGEVIVTKDDTMLLKG
RGDPSAIEKRVNEIAEQLESTNSDYEKEKLNERLAKLSDGVAVIKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALENIKAANSDQKIGIDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQSAPEIGYDAMLGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTELPKEEKDMPAGGMGGMGGMGGMGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtttacccagtgtaatgaaacagatgaggccagtgtgcagggcgctggcccca
cacctgactcgtgcgtatgccaaggacgtcaagtttggcgcagatgcccgggccctcatg
cttcagggtgttgaccttttagctgatgctgtggctgtcaccatgggaccaaagggtcgc
actgttattattgagcagagctggggaagccccaaagtcaccaaagatggtgtcaccgtt
gccaaaagtatcgaactgaaagataggtataagaacatcggggccaggctggtacaggat
gtggccaacaacactaacgaggaggctggagacggcactacaaccgccacagtactggcc
cgtgctgttgccaaggagggttttgacaccatcagcaaaggtgccaaccctgtggagatc
cgtagaggagtaatgatggcggtggaagaaatcatcaatgaactcaagaaactctccaag
ccagtcacaacaccagaggaaattgctcaggtggccactatttctgccaatggagacact
gaagttggtaacatcatctccaatgccatgaagaaagttggacgcaagggtgttattaca
gtgaaggatggtaaaaccctacatgatgagcttgagatcattgagggcatgaagtttgac
cgtggctacatttctccttacttcatcaacaccactaaaggccagaagtgtgagttccag
gatgcttacgtgcttctgagtgagaagaagatctccagcgtacagagcatcgtaccagct
ctggaaattgccaaccagcatcgcaagcctctggtcatcgtggctgaagatgtggacgga
gaggcactcagcactttggtcctcaacaggttgaaggttggacttcaggttgtggcagtc
aaggctccaggatttggggacaaccgaaagaaccagctgcaggatatggcagtttccact
ggaggcacggtgtttggtgacgaggctatgggactggccattgaggatatccaggcacat
gactttggcagggtcggcgaggtcattgtgacaaaggatgacacaatgctcctcaaaggc
cgtggtgatccatcagccattgagaagcgtgtgaatgagattgctgaacagctggagagc
acaaacagtgactacgagaaggagaaactcaacgagcgtctggccaagctctctgatgga
gtggctgtgattaaggttggtggaacaagtgacgttgaagtgaatgagaagaaagaccgt
gttactgatgcgctgaatgccactcgagctgctgtggaggagggaatcgttcctggagga
ggatgcgccctgctccgctgcatcccagccctggagaacatcaaagcagccaattctgat
cagaagattggtattgacattattcgcagagctcttcgcattcctgcaatgaccattgcc
aagaatgcaggagttgaaggctctctggtggtggaaaagatcttgcagagtgctccagag
atcggatatgatgctatgcttggagaatatgtcaacatggttgaaaaaggcattattgat
cccacaaaggtcgtgaggaccgcattgctagatgccgcaggtgttgcatctcttctgtct
actgctgaagccgttgtcaccgagctaccgaaggaggagaaggacatgccagctggagga
atgggtggaatgggaggcatgggcggaatgggtggcatgggattctaa
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