Ctenopharyngodon idella (grass carp): 127518647
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Entry
127518647 CDS
T08802
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cide03037
]
127518647
Cilium and associated proteins [BR:
cide03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
127518647
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_6
TPR_14
TPR_16
TPR_7
CFAP70_TPR_C
ANAPC3
TPR_11
TPR_9
TPR_17
RMD1-3
DUF6340
ARM_TT21_5th
SNAP
TPR_10
TPR_YpiA_C
TPR_CcmH_CycH
TPR-S
CNOT10_TPR
ARM_TT21_4th
TTC22_N
ARM_TT21_2nd
TPR_MalT
HAT_PRP39_C
RPN7
CFAP70_mid_TPR
DUF2225
TPR_YpiA
ARM_TT21_C
TPR_15
DUF6584
TPR_Psidin_N
RNPP_C
TPR_INTS8
Consortin_N
HEAT_Nup120
TPR_4
SUCH1_C
Motif
Other DBs
NCBI-GeneID:
127518647
NCBI-ProteinID:
XP_051761566
LinkDB
All DBs
Position
9:complement(10758659..10771308)
Genome browser
AA seq
855 aa
AA seq
DB search
MENVHLVPEEEEDDLYTGYNDYNPTFDSEDLHNDVGFQQAVRTSHGRRPPMTAKYPGTAI
GGRPIGTAYGSRIPVGTAMGRPMTGAVQDGAARPMTAVRAAGYSSSIARGSVFDPLGQAK
GPAPPLERQNEDTPEEKIKILEKKVNDLIEESCLAHARGDLQLSLEKAKEAGRKERALVR
QREQTGTADHINLDLTYSVLFNLANQYANNDMYTEALNTYQVIVKNKMFNNAGRLKVNMA
NIYFKQKNYTKAIKFYRMALDQISNAHNAMRIKIMQNIGVVFIHMGQYSDAITSFEYIMS
ESPNIKTGFNLILCYYAIGDRERMKKAFQKLICVPLDIDDEDKYIPANDDSHANMVIEAI
KNDKLHQMERERKALAEKYIMTSAKLIAPAIESSFAAGFDWCVDMVKGSQYVELANDLEI
NKAITYLRQRDFKQAVETLKMFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYAELAMSA
DRYNPAALINKGNTVFVKEDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEEALD
CFLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLTSVTPTDAQVLAKLGDLYDNE
GDKSQAFQYYYESYRYFPSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQDYATKLKKVEKM
KEIREQRVRSGRESSARGRREGSAGSGSSSSPINTPPLRASVSRSEAKYSPVLQQGRDSG
QSNHGTSAKGERLSVKLKTLPGSNEPYEASTQQEIDASYVDPLGPQMQRPKTAARKRTEE
DEFADEELGDDLLPE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtgcatcttgttccagaggaagaggaggatgatttgtatacaggctacaat
gattacaatccgacttttgactcagaggaccttcacaacgatgtgggctttcagcaggct
gtcaggacaagtcatggcagaagaccaccaatgactgcaaaatatcctggcactgctatt
ggagggcgaccgattggaacagcttatgggtctcggattcctgttggcactgcaatggga
aggcctatgactggagctgttcaggacggtgcggctcgtcccatgactgcagtgcgggca
gcaggatactcttcatctatagctagaggctcggtgtttgatccactgggacaagcaaaa
ggaccagcccctccattagagagacagaacgaagacacgccagaggaaaagataaagatc
ctggaaaagaaggtgaatgatttgatagaggagagctgtctcgctcatgctcgtggggat
cttcagctgtctctagagaaagccaaagaggcgggcaggaaggaaagggctctggtgaga
cagagagaacaaacaggcactgcagaccacatcaatctggatctgacctactctgtgttg
tttaatttagcaaaccaatatgccaataatgacatgtacactgaggccttgaacacatac
caagtcattgtgaagaacaaaatgttcaataatgctggacgattgaaagttaacatggca
aatatctatttcaagcaaaagaattacacaaaagcaatcaaattttaccgcatggctttg
gatcagatctcaaatgcccacaatgcaatgaggatcaagatcatgcagaacattggtgtt
gtgttcatacatatgggccagtactcagatgccatcacatcctttgagtacatcatgagt
gagagtcccaacataaagacaggcttcaacctcatcctgtgctactatgccatcggagac
cgtgaaaggatgaagaaagcttttcagaagctcatttgtgtgcccctcgatattgatgat
gaagacaagtatatccctgcaaatgatgactctcatgcaaacatggtgattgaggctata
aagaatgataagcttcaccaaatggaaagggagaggaaagcattagcagaaaaatacatt
atgacctcagccaagcttattgctccagccattgagtcgtcatttgcagctgggtttgac
tggtgtgtggacatggtgaagggttcacaatatgtggagcttgcaaatgacttggagatc
aataaagctattacatacttaagacagagggacttcaaacaggcagtggagacgctaaag
atgtttgagaagaaggacagtcgggtaaaaagtgccgctgccactaatctatcttttctc
tactttttggaaaaagattatgaccaggctgaccgctatgctgagctggccatgagcgct
gaccgctataaccctgctgccctcattaacaaaggcaacacagtgtttgtgaaagaggac
tatgagaaagcagcagagttttacaaggaggctcttcgtaatgactcgtcctgtactgaa
gccctctataacttaggtttgacctataagaggctgggtaggctggaggaagccctggac
tgcttcctcaaactgcacgctatcctcagaaacagtgctcaggtcatgtaccagctggct
aatctatatgagatgttggaagaccctcatcaggccattgagtggctgatgcagctcacc
agtgtgacccccacagatgcccaggtgctggccaaactgggagacctctatgacaatgaa
ggagacaaatctcaggccttccagtactattatgagtcgtacaggtattttccctcaaac
attagtgtgattgaatggttgggagcatattacattgacacccagttctgtgagaaagct
attcagtactttgagagagctaccctcattcaaccaacacaggtcaagtggcagctgatg
gtggctagctgttacaggagaagtgggaattatcagaaggcacttgagacctataaggac
attcatcggaaatttcctgaaaatgttgaatgtctacgcttcctggtcaggctgtgcact
gatatgggactaaaagaggtgcaggattatgccaccaaactgaagaaagttgaaaaaatg
aaggagatcagagagcagagggtgagatctgggagagagagcagtgctcgaggtcgcagg
gaaggcagcgctggcagtgggagcagctcaagccccatcaatacccctcctctgagagcc
agtgtttctcgctctgaagctaagtatagtcctgtgctgcagcagggcagagacagtgga
caaagcaaccatggcaccagcgccaagggtgagaggcttagcgttaaactgaaaactctt
cccgggtccaatgaaccgtatgaggccagcactcagcaggaaatagatgcttcttatgtc
gatccattggggcctcaaatgcagagaccaaaaacagcagcgaggaaacgcacagaggaa
gatgagtttgctgatgaagagctgggagatgacttactgcctgagtga
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integrated database retrieval system
