Ctenopharyngodon idella (grass carp): 127518713
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Entry
127518713 CDS
T08802
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127518713 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Protocadherins
127518713 (si:ch211-199f5.1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
127518713
NCBI-ProteinID:
XP_051761690
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All DBs
Position
9:392218..399604
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AA seq
978 aa
AA seq
DB search
MELARILGVTQLLICISVVVCEERTVRYKIHEEVRPPMVIGTLASNVTWTPDKTRRTFPG
IRFKLMSPSTGSFIRFRESDGRLTVEERVDRERICKRNPRCVITFDVAFVSAEQFELFHV
EVEVLDVNDNSPEFPRAECTVEISESAALGTRIALDAAEDADVGSNSIQSYHLSENTHFS
IDIITRVDGVKYAELVLVKELDRESRAFFALKLVAADGGNPPKSGATNVTVKVKDSNDNS
PLFEHSHYSVDVPEDTPTESLLLDLNAVDPDEGLNGQVVYEFGKQVTTKIRQLFKLDYKT
GYLTLQSPVDYEDETAYEIDVQASDLGHNPVPSVCKIIINIRDVNDNPPEIIITSIASVT
DGVAHVSEATGPDILVALISIKDKDTGANGQVSCTLNGGHGNFRLKRAYEGSYTIVTMAP
LDREKIAEYNLTVVAEDFGVPPLRTLTHYIVRLTDVNDNAPAFSAKIYEGFIEENQLPGT
YITTILASDQDAGLNGEITYELFDSDTNSVSRFAIMNQAGNVYALQSFNYEVTKRLDLRV
QASDRGWPQLHNNAVLVVNVVDQNDNAPFITHPPLNNGSAEIQLPRDAPPGYIVTRITAK
DSDAGLNAELTYKLYDDFGFAIDPNTGEIYINRKIAYDEYDMWKVLVTVNDNGHPSQTST
ATIHFTLTESAPSNGNFYDEREEDEPKQWTLILILALTSSSLMFLAILSYILCKSRKNGP
KRCADLPDAVDIPYSNEKNAVSMISSQTANVFDTHTFHSTTVIGTPEELHSSVQATAEVF
NETPHTFKSKYRSVAGEIDGYSTLPGYGKDNARPITVWKGNSMMTIAVRDPQISGKDSGK
GDSDVNDSDSDISEGLKKDYTSYKGLWACTSECRILGHSDRCWSPSVSRTSGSINTRHLS
TFSRTRPSSQAAGLQRSSYDTQTPRSVALHSLSEDQQSQYDYIHVCSPQSQRRRDTEDRD
GTVFTHSTNSPGRFTDTA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgcgcggatacttggagttacgcagcttctcatctgcatctcggtggttgtg
tgtgaggagcggacggtgaggtataagatacacgaggaggttcgaccgccgatggtcatc
ggaactctagccagcaatgtgacctggaccccggacaaaacgcgcaggactttccccggc
atcaggtttaagctcatgagtccgtccaccggctccttcatccgatttagggaaagcgac
gggaggctgacggtcgaggagcgcgtcgaccgcgagcgcatctgcaagcgcaacccgcgg
tgcgtaatcactttcgacgtcgccttcgtgtccgccgagcagttcgagcttttccacgtc
gaggtggaagtgctggatgtgaacgacaactcgccggagttcccgcgcgccgagtgcact
gtagagatctccgagagcgcggcgctggggacgcgcatcgcgctggacgccgcggaggac
gcggatgtgggctcgaactctatccaaagctaccacttgagtgaaaacactcacttcagc
attgatatcataacgcgagtggatggggttaaatatgcggagctggtgctcgtcaaagag
ctggaccgagaatcccgcgcttttttcgcgctcaaacttgtggcggcagacggcgggaat
ccgccgaaaagcggcgcgactaatgtcaccgtcaaagtgaaggactctaatgacaacagc
ccgctgtttgagcacagccattactctgtggatgtgccggaggacaccccgactgaatcc
ctactgctggatctcaacgccgtcgatccggatgagggtctaaacgggcaggttgtgtat
gaatttggcaaacaagtaactacaaagattagacaactgtttaaactggattataagact
ggatatttgacattgcaaagccctgtggattatgaagacgagactgcgtatgaaatcgac
gtgcaagctagtgatttggggcacaatccggttccctcggtgtgcaagattatcatcaac
atcagagatgtgaacgacaaccctcctgagatcatcatcacgtccatcgcgtcggtgaca
gatggtgtcgcacatgttagtgaagctacaggtccggacatcctggtggctctgatcagc
attaaagataaggacaccggggcgaacggacaggtgagctgcactctgaacggcggacac
ggcaacttcaggcttaaaagagcgtacgagggcagctacaccattgtcacgatggcacct
ttggatcgagagaagattgcggagtataatttgactgtagtggcggaggatttcggcgtt
ccgccgctacgcacgttgactcattacatcgtacggctcaccgacgtcaacgataacgcc
ccggcgttcagcgccaagatatacgaaggtttcattgaggagaaccaattaccaggtaca
tacatcaccacaattctggcgagcgatcaagacgcgggattgaacggggaaataacctac
gagctttttgactcggacacgaacagcgtctccaggtttgccatcatgaatcaagcggga
aacgtttacgccctgcaaagcttcaattacgaagtgacgaagaggctggatctgcgcgtc
caggccagtgacagaggatggccgcagcttcacaacaacgccgtcctcgtcgtcaatgta
gtcgatcagaacgacaacgccccctttataactcacccgccgctcaacaacggatccgcc
gaaatccagcttcccagagacgccccgcccgggtacatcgtgacccgaataacggctaaa
gattcggacgccggtctgaacgccgagctcacttacaagctttacgacgacttcggcttc
gcgatcgatccgaatacgggagaaatatatatcaatcggaaaatcgcttacgacgagtat
gacatgtggaaagtcttagtgacggtcaacgacaacggccacccgtcgcagacctccacg
gccaccattcatttcactctaaccgagtcggcgccctccaacggaaacttctacgacgaa
agagaggaggatgaacctaaacaatggacgcttattttaatcttggccctgaccagttcc
tcgctgatgtttttggctattttatcatacatactatgcaaaagtcggaaaaacggtcca
aagagatgcgctgacctccctgacgcggtggatattccgtactcgaacgagaagaacgcc
gtctccatgatctccagccagaccgccaatgtgttcgacacgcacacgtttcactccacc
accgtcatcggcactcctgaggaactgcacagcagtgttcaggcgaccgccgaagtcttc
aacgaaacgccacacaccttcaagagcaaatataggagtgtggcgggggagatagatgga
tattctactttgcctggttatggcaaagacaacgctcgaccgatcacagtgtggaaagga
aactcgatgatgaccatcgcggtcagagacccacagatcagcggaaaagacagtggaaaa
ggagacagtgatgttaatgacagtgactctgacatcagtgaaggcctcaagaaggactac
acctcatataaaggtctgtgggcttgtaccagtgaatgcaggatcctgggccactcagac
agatgttggagcccatctgtaagcagaaccagcgggagcattaacaccagacatctctcg
accttctcaaggacgaggccgtcctcacaggccgcagggcttcagaggagcagctacgac
acacagacgcccagaagcgtggctttgcacagcctctccgaagatcagcagagtcaatac
gattacattcacgtctgctctccacagtcacagaggagacgagacactgaggacagagac
ggcaccgtgttcacacactccacgaacagtcccgggaggttcacagacacagcctga
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