KEGG   Ctenopharyngodon idella (grass carp): 127518713
Entry
127518713         CDS       T08802                                 
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
  KO
K16499  protocadherin delta 2
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cide04515]
    127518713 (si:ch211-199f5.1)
Cell adhesion molecules [BR:cide04515]
 Cadherins
  Protocadherins
   127518713 (si:ch211-199f5.1)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_3
Other DBs
NCBI-GeneID: 127518713
NCBI-ProteinID: XP_051761690
LinkDB
Position
9:392218..399604
AA seq 978 aa
MELARILGVTQLLICISVVVCEERTVRYKIHEEVRPPMVIGTLASNVTWTPDKTRRTFPG
IRFKLMSPSTGSFIRFRESDGRLTVEERVDRERICKRNPRCVITFDVAFVSAEQFELFHV
EVEVLDVNDNSPEFPRAECTVEISESAALGTRIALDAAEDADVGSNSIQSYHLSENTHFS
IDIITRVDGVKYAELVLVKELDRESRAFFALKLVAADGGNPPKSGATNVTVKVKDSNDNS
PLFEHSHYSVDVPEDTPTESLLLDLNAVDPDEGLNGQVVYEFGKQVTTKIRQLFKLDYKT
GYLTLQSPVDYEDETAYEIDVQASDLGHNPVPSVCKIIINIRDVNDNPPEIIITSIASVT
DGVAHVSEATGPDILVALISIKDKDTGANGQVSCTLNGGHGNFRLKRAYEGSYTIVTMAP
LDREKIAEYNLTVVAEDFGVPPLRTLTHYIVRLTDVNDNAPAFSAKIYEGFIEENQLPGT
YITTILASDQDAGLNGEITYELFDSDTNSVSRFAIMNQAGNVYALQSFNYEVTKRLDLRV
QASDRGWPQLHNNAVLVVNVVDQNDNAPFITHPPLNNGSAEIQLPRDAPPGYIVTRITAK
DSDAGLNAELTYKLYDDFGFAIDPNTGEIYINRKIAYDEYDMWKVLVTVNDNGHPSQTST
ATIHFTLTESAPSNGNFYDEREEDEPKQWTLILILALTSSSLMFLAILSYILCKSRKNGP
KRCADLPDAVDIPYSNEKNAVSMISSQTANVFDTHTFHSTTVIGTPEELHSSVQATAEVF
NETPHTFKSKYRSVAGEIDGYSTLPGYGKDNARPITVWKGNSMMTIAVRDPQISGKDSGK
GDSDVNDSDSDISEGLKKDYTSYKGLWACTSECRILGHSDRCWSPSVSRTSGSINTRHLS
TFSRTRPSSQAAGLQRSSYDTQTPRSVALHSLSEDQQSQYDYIHVCSPQSQRRRDTEDRD
GTVFTHSTNSPGRFTDTA
NT seq 2937 nt   +upstreamnt  +downstreamnt
atggagctcgcgcggatacttggagttacgcagcttctcatctgcatctcggtggttgtg
tgtgaggagcggacggtgaggtataagatacacgaggaggttcgaccgccgatggtcatc
ggaactctagccagcaatgtgacctggaccccggacaaaacgcgcaggactttccccggc
atcaggtttaagctcatgagtccgtccaccggctccttcatccgatttagggaaagcgac
gggaggctgacggtcgaggagcgcgtcgaccgcgagcgcatctgcaagcgcaacccgcgg
tgcgtaatcactttcgacgtcgccttcgtgtccgccgagcagttcgagcttttccacgtc
gaggtggaagtgctggatgtgaacgacaactcgccggagttcccgcgcgccgagtgcact
gtagagatctccgagagcgcggcgctggggacgcgcatcgcgctggacgccgcggaggac
gcggatgtgggctcgaactctatccaaagctaccacttgagtgaaaacactcacttcagc
attgatatcataacgcgagtggatggggttaaatatgcggagctggtgctcgtcaaagag
ctggaccgagaatcccgcgcttttttcgcgctcaaacttgtggcggcagacggcgggaat
ccgccgaaaagcggcgcgactaatgtcaccgtcaaagtgaaggactctaatgacaacagc
ccgctgtttgagcacagccattactctgtggatgtgccggaggacaccccgactgaatcc
ctactgctggatctcaacgccgtcgatccggatgagggtctaaacgggcaggttgtgtat
gaatttggcaaacaagtaactacaaagattagacaactgtttaaactggattataagact
ggatatttgacattgcaaagccctgtggattatgaagacgagactgcgtatgaaatcgac
gtgcaagctagtgatttggggcacaatccggttccctcggtgtgcaagattatcatcaac
atcagagatgtgaacgacaaccctcctgagatcatcatcacgtccatcgcgtcggtgaca
gatggtgtcgcacatgttagtgaagctacaggtccggacatcctggtggctctgatcagc
attaaagataaggacaccggggcgaacggacaggtgagctgcactctgaacggcggacac
ggcaacttcaggcttaaaagagcgtacgagggcagctacaccattgtcacgatggcacct
ttggatcgagagaagattgcggagtataatttgactgtagtggcggaggatttcggcgtt
ccgccgctacgcacgttgactcattacatcgtacggctcaccgacgtcaacgataacgcc
ccggcgttcagcgccaagatatacgaaggtttcattgaggagaaccaattaccaggtaca
tacatcaccacaattctggcgagcgatcaagacgcgggattgaacggggaaataacctac
gagctttttgactcggacacgaacagcgtctccaggtttgccatcatgaatcaagcggga
aacgtttacgccctgcaaagcttcaattacgaagtgacgaagaggctggatctgcgcgtc
caggccagtgacagaggatggccgcagcttcacaacaacgccgtcctcgtcgtcaatgta
gtcgatcagaacgacaacgccccctttataactcacccgccgctcaacaacggatccgcc
gaaatccagcttcccagagacgccccgcccgggtacatcgtgacccgaataacggctaaa
gattcggacgccggtctgaacgccgagctcacttacaagctttacgacgacttcggcttc
gcgatcgatccgaatacgggagaaatatatatcaatcggaaaatcgcttacgacgagtat
gacatgtggaaagtcttagtgacggtcaacgacaacggccacccgtcgcagacctccacg
gccaccattcatttcactctaaccgagtcggcgccctccaacggaaacttctacgacgaa
agagaggaggatgaacctaaacaatggacgcttattttaatcttggccctgaccagttcc
tcgctgatgtttttggctattttatcatacatactatgcaaaagtcggaaaaacggtcca
aagagatgcgctgacctccctgacgcggtggatattccgtactcgaacgagaagaacgcc
gtctccatgatctccagccagaccgccaatgtgttcgacacgcacacgtttcactccacc
accgtcatcggcactcctgaggaactgcacagcagtgttcaggcgaccgccgaagtcttc
aacgaaacgccacacaccttcaagagcaaatataggagtgtggcgggggagatagatgga
tattctactttgcctggttatggcaaagacaacgctcgaccgatcacagtgtggaaagga
aactcgatgatgaccatcgcggtcagagacccacagatcagcggaaaagacagtggaaaa
ggagacagtgatgttaatgacagtgactctgacatcagtgaaggcctcaagaaggactac
acctcatataaaggtctgtgggcttgtaccagtgaatgcaggatcctgggccactcagac
agatgttggagcccatctgtaagcagaaccagcgggagcattaacaccagacatctctcg
accttctcaaggacgaggccgtcctcacaggccgcagggcttcagaggagcagctacgac
acacagacgcccagaagcgtggctttgcacagcctctccgaagatcagcagagtcaatac
gattacattcacgtctgctctccacagtcacagaggagacgagacactgaggacagagac
ggcaccgtgttcacacactccacgaacagtcccgggaggttcacagacacagcctga

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