Ctenopharyngodon idella (grass carp): 127518714
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Entry
127518714 CDS
T08802
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127518714
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Protocadherins
127518714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
127518714
NCBI-ProteinID:
XP_051761691
LinkDB
All DBs
Position
9:complement(350625..356198)
Genome browser
AA seq
966 aa
AA seq
DB search
MKNFYSHISFQVIFLFANMKIYCSYFMLLCMICNGCCTTTKYFTFEEDSPGTEIGNLSQD
LKIDPAEDPETSFKFIQKTNSIIHMRQIDGLLTVGEVIDREQLCHRSPQCLITFDVVAFS
KEKFQLIHVEIEVKDINDHSPQFTRNETHLDISEDAPLNSRFPLDVAVDLDVGDNYVQSY
HISHTNHFVVEVSTREDGAKSAELVLIKKLDRETEEFYTIEVTATDGGTPAKSGLTTVYI
RVLDFNDNSPTFEHNSLKVQLSEDSPIGSRVLKVHAFDPDAGINGEVVYGFVEGSPTEVT
RVFQIDLITGEVTLRDEVDYETKKSYELHIQASDLGANSVSSTCRAVVDILDVNDNAPEI
SIKPMTSTSDGVAFITEAAAEESFVALISTSDGDSGPNGYVSTTLEGHEHFKLQQAYSDT
FMIVTTATLDREAISEYNLTVIAEDLGTPPFKTIKHYTIRITDENDNAPMFSKATYDVSV
IENNIPGSYMTTVVARDLDFGKNGKVSYSLIDSKTSDGSPISTFVSIDPHSGSLYTLRSF
NFETLKEVEFAVKASDKGFPSLSSTTLIQIRVVDENDNFPYFTYPVLRNDSADVPIPLNA
QAGYLALRVTAQDEDSGVNKELSFHILEDETQIFSIDKKTGEIILNRRLAASCGDVLQIK
VSVVDGGREPLSSTATVRFVVTDTGAQEDQVVILLRSKDEETLEFDVWTVVIVGFSGSCV
LLLAAITVLTVTCTIKRRRRNFGRDGLYGSTPLSKNGTVGSNIYGGANAFLRNESDSMQP
CLYEDKSLDFEEKLFLPCKPFEQTFLWQDEKYCLQRSGTSNTDQLSVKDSGKGDSDFNDS
DSDSSGAALKRGLTTFQPLARGSLSAAGDWKSGGHVIQTRNMHVPPGSAYTIGFSPVYNT
THLTSHSWKEGHSQGNMNGRSGMQTFSRTGTLPSYSAHQVRRMRTGVEEQTHTVLLSDAS
EVATTF
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttttattctcacatttcttttcaagtgatttttttgtttgcaaacatgaag
atctactgcagttacttcatgcttctgtgcatgatttgcaacggctgctgcacaacaacg
aagtactttacatttgaggaagattcacctggtacagagatcggaaacctttctcaagac
ttgaaaatagacccggcggaggatcccgagacatcgttcaagtttattcagaagacaaac
tccatcatccacatgaggcaaatcgacgggctgttaaccgttggagaagtcattgaccga
gagcagctgtgtcaccgatccccacagtgtcttataacttttgacgtcgtcgccttttca
aaggagaaatttcagctcatccacgtggagattgaggtaaaagacattaacgatcattcg
cctcagtttacacgcaacgaaacgcatttggatatatcagaagacgcacctttaaactca
cggtttcctctggacgtcgctgtggaccttgatgttggagataactacgttcaaagctac
catatttcacacacaaaccattttgttgttgaagtcagcactcgtgaggacggagcaaag
tctgctgagcttgtgttgatcaaaaagcttgaccgggagacggaagagttttacacaatc
gaggtgaccgcgaccgacggcgggactcctgcgaaatcaggcttgacaaccgtttacatc
cgagtgttggacttcaacgacaacagcccgacgtttgagcacaactcactcaaagtccaa
ctcagtgaagattcacccatcgggtcccgtgtgctgaaagtgcacgctttcgaccccgac
gccggcatcaacggagaagtcgtctacgggttcgtcgaaggctccccgaccgaagtcaca
cgtgttttccagatcgacctcatcacaggagaagtgaccctcagagacgaggtcgactac
gagaccaagaagtcgtacgagttgcacattcaggcctccgatctgggcgccaattcagtt
tcgtctacatgccgggctgtcgtcgacatcctcgacgtgaacgataacgcgccggagatc
agcatcaaaccaatgacttccaccagcgacggagtggcgttcatcaccgaggccgcggcc
gaagagagttttgtggcgctgatcagcacctcagacggagattcaggtcccaacggttac
gtcagcaccactttggaaggacacgagcattttaagttgcaacaagcctacagcgacacc
ttcatgatcgtcacgaccgcaactttggacagagaagccatttcagagtacaacctcact
gtgattgctgaggatttgggaacgccgccgtttaaaaccatcaagcattatacgatacgc
atcacggacgagaacgacaacgctccgatgtttagtaaagccacatatgatgtctcggta
atagaaaacaacattcccggctcgtacatgactacagtggttgcacgagatcttgacttt
ggaaaaaacgggaaggtctcctacagtcttatcgacagcaaaacttcagacggttcgcca
atatctacatttgtgtccatcgaccctcactcgggctctttgtacacgctgagatccttc
aattttgagactctgaaagaagttgagttcgccgtgaaggctagcgataaaggtttccct
tcattatccagcacgactttgatacaaatccgtgtggtggatgagaacgacaactttccg
tattttacgtatccagttttgcggaatgattctgccgatgttccgattcccctcaacgct
caggctggttatttggcgttacgagttaccgctcaagatgaagacagcggcgtcaacaaa
gagctcagttttcatatcctagaagacgaaacgcagattttttccattgacaaaaagact
ggcgaaatcatcttgaaccgaagactcgctgcttcatgcggagacgtcctgcagattaaa
gtttcagttgttgacggcggcagagagccgctttctagcaccgcaaccgtccggttcgtg
gtgacagacactggtgcacaagaggaccaggtggttattttactccgatcgaaggatgag
gagactctggagtttgatgtctggaccgtggtgatcgttgggttctctggaagctgtgtg
ctgttactggcggcgatcaccgtcctcaccgtgacttgtacgatcaaacgcagacggagg
aactttgggagagacggcctgtacggatcaaccccgctgtccaagaacggcactgtcggc
tcaaacatttacggcggcgctaatgccttcctcagaaatgaaagcgattcaatgcaaccc
tgtctgtatgaagacaagagcctggattttgaggaaaagctgttcctgccatgcaaacct
tttgagcaaacatttttatggcaagatgaaaaatactgtctgcaaaggagtggcacgagc
aacacggatcagctgagcgtgaaggacagcggcaaaggagacagtgacttcaacgacagc
gactctgacagcagcggagcggctctgaagagaggcctgaccaccttccagccgctggcc
agaggttccctcagcgccgcaggagactggaagagcggaggtcacgtgatacagacccgt
aacatgcacgtccctcctggcagcgcctacaccatcggattctcacccgtttacaacaca
acacatctcacttcccattcctggaaagaaggccacagtcaagggaacatgaatggacgg
agcggcatgcagacgttctcacggacaggaactctgccttcatactcggcccatcaggtg
aggaggatgaggactggggtcgaagagcaaactcacactgtcctgctctcagatgcgtct
gaagtcgccaccacattttag
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