Ctenopharyngodon idella (grass carp): 127518730
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Entry
127518730 CDS
T08802
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127518730
Glycosaminoglycan binding proteins [BR:
cide00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
127518730
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Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
FAM60A
Motif
Other DBs
NCBI-GeneID:
127518730
NCBI-ProteinID:
XP_051761716
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All DBs
Position
9:20125235..20136158
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AA seq
898 aa
AA seq
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MEVTAEAPSAVVTMELDTEITNEIEQEAAALPTRPLVEQRVELAMLLSGEPWSEALLNST
SSEHGRLTQRITEKISAALEKLTEFKSVSVLNIRPQVDPSSGDKAVLVEYVVSLQSNSEV
ISSETLDFINLQSNMVEGTFSYSEGPTVQYTIIDLHPDITEALHEETSPEETHPAEEFPD
PDHKDDILSVEKPSELPGEVAKEVFTINDHLDPTMSEEEGMGEQDVIHLDENTPPLIDHP
SGSFSEDLQDKDMALLFPPSQTPAVEGETVGSIIDAKQDSDITMYDLDPASGSGAIEYNW
VTVLPTEAQEPAGETEVDEEFLINVDMPQIDNYEFSTITTVVEEDQILPEETTELITVEA
GEDKNLQHISDAPAVPSVKVAEVESTPEPEKELILPAEEEGQEEDNKEESILTETQKDED
SEVAVITKEKSEEAEEEEEYVDITTMPQENKDFVLTDTSVIQFSEEILKEDEILLVTIEP
ASPVYPTPLSPEIEQPFSLMTMKTPEEVELGHTLNSEVMTTSLDVIDYREEEGSGFPSVI
QGDGVSSIALPTNPGRSLIVFFSLRVTNMMFSDDLFNKSSAEYKALEQRFLELLVPYLQS
NLSHFENLEILNFRNGSIVVNSRMKFGKPVPRVINTAVYLILEDFCNTAYQTMNLAIDKY
SLDVESGEHADPCKFQACNEFAECTVNRWSGEAECVCNAGYFSVDGLPCQSICDLQHDFC
LNDGKCDVIPGQGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASGVIF
FLARTLRDQYDKDETEDPVRSDDSPPFIDRATKYNPMFESDLTTGYSHYYQRYPEPPVHS
STSAEASTDFSSEEIQHIYENSELTKEEIQDRIRILELYTRDRQFADFLRQHQMQVFF
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggaagttactgcagaagcaccatctgctgtcgtgacaatggagctggatactgagatc
actaatgagattgagcaggaggcagctgctttgcctacacgtcctctggttgagcagagg
gtagagctggctatgttactgagtggagaaccatggagtgaagcgctgctcaactccacc
agcagtgagcatggcagactcactcagcggatcacagagaagatttccgctgctttggag
aaactaacagaattcaagagtgtttcagtattgaacatcaggccacaggtggatccctca
agtggtgataaggctgtactggtggaatatgttgtgtccctccagagcaacagtgaagtg
atcagcagtgagacgctagacttcattaatcttcaatccaacatggtagagggcaccttt
agttactcagaggggcccacagtccagtacaccattattgacctccaccctgacatcact
gaggctctgcatgaggaaacatctccagaggaaacccatcctgccgaggagttcccagac
cctgaccacaaggatgatattttatcggtagaaaaaccgtctgagctgcctggagaagtg
gcaaaggaggtctttaccattaatgaccatttggatcctacaatgtctgaagaggaaggt
atgggagagcaagatgtcatacatttagatgagaacacaccaccccttatagaccatccc
agcggtagtttctcagaggaccttcaagacaaggacatggcattactgtttcctcctagc
cagacccctgctgtggaaggtgaaactgttggttccattatcgatgccaagcaagacagt
gacattacaatgtatgaccttgatcccgcctcaggatctggtgcaatagaatacaattgg
gtaactgtccttcctactgaggctcaagagccagctggagagacagaggttgatgaagag
tttttgattaacgtagacatgccacagatagataactatgaattctccacaattacaaca
gtggttgaagaagaccagatcttgcctgaggaaaccacagaattgattactgttgaagct
ggagaagataaaaacctacaacatattagtgatgcgcccgcagtgccatcagtcaaggtg
gctgaggtagaatctaccccagaacctgagaaagagctcatattacctgcagaagaagag
gggcaagaggaagacaacaaggaagaaagtattctaacagaaacacaaaaggatgaggat
agtgaagttgctgtaatcacaaaggagaaatcagaggaggctgaagaagaggaagaatat
gttgacattaccacaatgccacaggagaacaaagattttgtgctaacagatacttcagtt
atacagttttcagaggaaattctaaaagaggatgagatcctattggtcacaattgaacca
gcaagcccagtctacccaacaccactttcacctgagatagaacaacccttctccctcatg
accatgaagaccccagaagaggttgagttggggcataccttaaattcagaagtcatgact
acatctctggatgtgattgattacagagaggaagagggtagtggtttccctagtgtcatt
cagggtgatggagtttccagcattgccttgccaactaaccctgggaggtctttgatagtg
tttttcagtcttcgtgtaactaacatgatgttttctgacgatctgttcaataagagctct
gcagagtacaaagccttggagcaacggttccttgaactgttggtgccatatctgcagtca
aacctcagtcactttgagaacctggagatcttaaactttagaaatggaagtattgtggtg
aatagccgtatgaagtttgggaagcccgttcctcgtgtaatcaatactgctgtttacctc
attcttgaggacttttgcaacactgcttaccagaccatgaaccttgccattgacaaatat
tcattggatgtcgaatcaggggaacatgcagacccgtgcaagtttcaggcatgtaatgag
tttgcagaatgtacagtgaaccgctggtcaggtgaggctgaatgtgtgtgtaatgctggt
tacttcagcgtggacggactaccctgccagagcatctgtgaccttcagcatgacttctgc
ctgaatgatgggaaatgtgatgtcattccaggacaaggagccatttgcagatgccgtgtg
ggggaaaactggtggtacagaggagaacattgtgaagaatatgtttctgagccactcgta
gttggcattgccatagcatctgttgctgggttcctgctggtggcatcgggagtaatcttc
ttcttagcaagaactctgagagaccagtatgacaaggacgagacagaagacccagtacgg
agcgacgacagtccaccgtttatagacagagccactaagtacaaccccatgttcgagagc
gatttaacaacaggctacagccattactaccagcggtacccagagcccccagtccacagc
agcaccagtgctgaagcatccactgacttcagcagtgaagagatacagcatatttatgag
aacagcgaactcaccaaggaggagattcaagatcgcatacgcatccttgaactctacacg
agagatcgtcagtttgcagattttttgcggcagcatcaaatgcaagtatttttttaa
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