Ctenopharyngodon idella (grass carp): 127518850
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Entry
127518850 CDS
T08802
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127518850
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
127518850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_MYOM1
Ig_4
VEGFR1-3_N_Ig-like
Ig_6
Ig_5
Izumo-Ig
C2-set_2
BiPBP_C
WD40_Apc4_C_fungal
Motif
Other DBs
NCBI-GeneID:
127518850
NCBI-ProteinID:
XP_051762023
LinkDB
All DBs
Position
9:<8342286..8367735
Genome browser
AA seq
1396 aa
AA seq
DB search
SKSVIVFFVAFLTAQLSHYEVFSGETYDDSVRCTEDIKAPPVTFAYIPEDDLHRNIVEQD
NLLLCCQVSRSDATAQWYKDGVELKSSDNVLIEAENTLRRLIILSAQLSDSGTYTCRAGD
SALIFKVNVREPPVMIVYPKEDVHLDRYVPEEIVLSCELSRPNGKVTWFKDGQKLQESEN
IKLKTEGPYRRLKILRSGVEDSGEYVCDTADDSIFFNLNIKEPPVRIVSPSQSQMELCQQ
TSERMVLSCEISRPNANVRWYRDGLEVEESDSLILEVDGVYRRLIIPKPTVKDSAEYVCD
TAEDSVTFFVNIAEPPVRFIRPRKTTYAVEKLVGDIVVLECEVSRPNAEVSWKKDGEEIE
ENINITITEDGTSRQLTIHSAALDDAGQYVCDARDDVMDFLVKIKDPPLKILRKADIETK
RQFVVSDAIVLKCEISRANGVVSWLKDNEKIEGKEHFICEEEGAFRSLIVLSAELMDSGE
YICDAQDDKVVFTVTVEEAPVSIVGNSEKPEHHILMTGDELILECEVSRANAIVQWYCNG
SLLQEDSRTHIESRDTMRKLVISRLQTSDSGEYLCDAIDDKMITRLTVQEPPFKFIKKEE
RTNISAYEEDSVTLRATVNRVNAPVKWRRGHDPIRGDRFHTTSDGNTHYLTINPLKRCDT
GEYTCHVGSDEMHFSVQVKAMKVKFSKPLENIVGLEGSDVVLKCELYKSKGDVQWLKDSQ
EIVPNRHFTIRADGRVRSLTIYNITEDDAGEYACESKDERTSAAVVVNIPRIVEFIAELH
NITVMEGEDATFKCVVSPEDAKLAWFRNGQPISSNDKFNISSNGLCHMLHINKCQVSDSC
KLTAKAEGVISRAILQVQEAQVLFTKSMDPVVAEEFGEATLEVEVSLETAEVQWMRQGVV
IHPGSKFTLKQSGKKRSLTIHKLTLSDRGTYSCETLHDRTQAKLSVEPRKIKIRKGLTEI
QTYERETASFEVELSHSNVEGVWQKDGHALKNNNRLRMTAKGRVHSLTISSLTLDDTGTY
IFSVENVRSLARLNVKEIPVSILKKLEDIRQPEGSGITLECELSRHNVDVKWTKNEVQLK
PGKNHRIYSMGRKCFLHILKCELGDSGLYVCDAGEAKTSCSVEIYERELEILQSLEDLDI
QEDQNAVFMCEVSLDDVPGEWFKNKEKIKPTSTIKIRQEGTKHFLLICNVKGDDSGEIKF
VAKNVESTAYLEVEALPANIAKPLQDKTALEKTRVILDCTVTNPRCSIRWYKGPNVILPS
ERFEICSEGCYRKLVIQQVLLEDEGTYSVQVGNYTSSAKLTVEAQSVVMVRELQDVDVTA
PADACFECEVSLPVVKAPTWTLKGETLHPGPKVVVEKMGTVHRLTLKQTSADMSGIVCFI
TGRVKSTAHLCVISNH
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
agcaagtcagttattgttttctttgtggctttcctaacagcacaactgtctcactatgag
gtgttcagtggtgagacctatgatgactctgtccggtgcacggaggatataaaagcacct
cctgtgacatttgcctatataccagaagatgatctgcacagaaatattgtggaacaagac
aatctactcctttgctgtcaagtgtccaggtcagatgctacagcacaatggtacaaggat
ggagtagagttaaagtctagtgacaatgtcctcatagaggcagaaaacactttacgaagg
ctgatcatcctgtcagctcagctgtcagattctggaacatatacctgtcgtgctggagat
agtgccttaatatttaaagttaacgtaagagaacctccagtgatgattgtatatcccaag
gaagatgtccaccttgatcgctatgttcctgaagaaattgtcctcagctgtgaactttca
cgaccaaatggaaaggtgacatggttcaaggatggacagaaactacaagagagcgaaaac
ataaagctaaagacagagggtccatatagacggctaaaaattctgcgcagtggtgttgag
gactctggagaatatgtctgtgacacagctgatgattcaatattctttaatctaaacata
aaagaaccaccggtgcggatagtttctccaagccagtcccaaatggaactttgccaacag
acttctgagaggatggtcttaagctgtgaaatctctagacccaatgccaacgtacgttgg
tatcgagatggtcttgaagtggaggagagtgacagcctaattctggaggttgatggtgtc
tataggaggcttattatcccaaaacctaccgtcaaagactctgcagaatatgtctgtgac
actgctgaggactcagtaaccttctttgtaaatattgcagagccaccagttaggtttatt
cggccaaggaaaacaacctatgcagtagagaaacttgttggagacattgtggtccttgag
tgtgaagtgtctcgaccaaatgctgaagttagctggaagaaggatggagaagagattgag
gagaacatcaacattactatcacagaggatggcacaagtcgacagttaaccattcactcc
gcagctttggatgatgcagggcaatatgtctgtgatgccagagatgatgtaatggacttc
ctagtgaaaatcaaagatccaccactgaaaattctgcggaaagctgacatagaaacaaaa
cgccagtttgtagtatctgatgcgattgtcttaaaatgtgagatctcaagagcaaatggg
gtggtcagttggcttaaagacaatgagaagattgagggaaaggagcatttcatctgtgaa
gaggaaggggcattcagatctctgattgttctgagtgctgagttgatggactcaggagag
tacatttgtgatgcacaagatgataaagttgtcttcactgttactgtagaagaggctcca
gtgtccattgttggaaattcagagaagccagaacatcacattttaatgacaggagatgag
cttatcctggaatgtgaggtatcacgagcaaatgctatagtccagtggtactgcaatgga
agtttactacaagaggattcacgcacacacattgaaagcagagacacaatgaggaagctt
gtgatatcaagacttcagacatctgactctggagagtatctctgtgatgccattgatgac
aaaatgataactaggctaacggttcaagaaccaccattcaaattcatcaaaaaagaagaa
agaacaaatatttcagcctatgaagaagacagtgtgacactacgtgccactgttaacagg
gtcaatgccccagtgaaatggcgaaggggtcatgatccaatccgaggagatcgtttccac
acaacaagtgatggtaacacccactaccttactattaacccacttaagagatgtgatact
ggagagtacacatgtcacgtgggatccgacgagatgcacttcagtgtccaagtcaaagca
atgaaagtgaaattctccaaaccactggaaaacatagtgggactcgaaggtagtgatgtg
gttttaaaatgtgaactgtacaagtcaaaaggagatgttcagtggcttaaggacagccaa
gagattgtgccaaacagacattttacaatcagagctgatggtcgagtgagaagcctgaca
atatataacatcacagaagatgatgcaggagaatatgcttgtgaatccaaagatgaaagg
acatcagctgctgtagtggtcaatattcctcgcattgtggagtttattgcggagctacac
aacataactgtcatggaaggagaagatgcaacatttaagtgtgtagtgtctccagaggat
gcaaagttggcctggtttagaaatggccagccaatttcatcaaatgataagttcaacatc
tcaagtaatggattatgccatatgttgcatatcaacaaatgccaagtctcagatagctgc
aagttgactgctaaggctgaaggtgtgatttccagagctatccttcaggtccaagaggcg
caggtacttttcacaaagagcatggacccggtggttgcagaggagtttggtgaggcaacg
cttgaggtggaggtcagccttgagactgcggaggtgcagtggatgagacaaggagtggtt
atacatccagggtccaaattcaccctgaagcagagtggcaaaaaacgttctctcacaatc
cacaaactcaccctttcagaccgaggcacctacagctgtgaaacgctccatgaccgcacg
caagccaagctcagtgtggaaccacggaaaatcaagattcggaaaggtctaactgagatc
cagacttacgaacgagagacagcttcttttgaagtggagctgtcacatagcaatgtggag
ggtgtatggcagaaggatgggcatgctctcaaaaacaacaaccgtttgcgtatgactgca
aaaggacgggtacacagccttaccatctccagcctgaccttggatgacactggcacctac
atattctctgttgagaatgtcagatcattagcaagattgaatgttaaagaaatcccagta
tcaatcttgaaaaagcttgaggatatcaggcaaccagagggatctggtataacccttgaa
tgtgagctgtcacgccacaacgtagacgtaaagtggacaaagaatgaagttcagcttaaa
ccaggaaaaaatcatcgcatttactctatgggaagaaagtgctttctacatatcctgaag
tgtgagctgggagactctggtttatatgtgtgtgatgctggggaagctaaaacatcctgt
tcagtggaaatctatgagagggaacttgagatactacaaagcttagaggatctggatatt
caagaagatcaaaatgcagtgttcatgtgtgaagtgtcactggatgacgtgcccggagaa
tggtttaagaataaagagaagataaaaccaaccagcaccattaagatccgccaggaaggg
actaagcacttcctcctcatatgcaacgttaaaggagacgactctggagagatcaagttt
gtagccaagaatgttgagtctacagcttaccttgaggtggaagcactaccagcaaacatt
gcgaaaccacttcaggataaaacagctctagaaaaaacccgtgtcatactggactgcact
gtgaccaatcctcgttgcagcattcgctggtataagggacctaatgtcatcctgccctca
gagcgctttgagatctgcagtgaagggtgctatcgaaaacttgtgattcagcaggtgttg
ctagaggatgagggcacctatagtgttcaagttgggaactacacatcctcagcaaaacta
actgttgaagctcagtcagtcgtgatggtgcgagagctgcaggatgtggatgtaactgct
cctgcagatgcatgctttgaatgtgaagtctctctgcctgtggtcaaggcacctacatgg
accctgaaaggggaaacactgcatcctggtcctaaagttgtggtggagaaaatgggaact
gttcataggctcactcttaaacaaacttccgcagacatgagcggcattgtgtgctttatc
acaggaagagttaaaagcactgcacatctgtgtgtcataagtaaccactga
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integrated database retrieval system