Ctenopharyngodon idella (grass carp): 127519000
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Entry
127519000 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127519000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127519000
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127519000
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127519000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_4
Pur_ac_phosph_N
zf-C3HC4
zf-C3HC4_2
TRIM_CC
zf-RING_2
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
PRY
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127519000
NCBI-ProteinID:
XP_051762292
LinkDB
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Position
9:complement(505879..544703)
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AA seq
676 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCSSFDESTKPYSAFQCPTC
RYVITLDQQGLDGLKRNVTLQNIIDRFQKASLSGPNSPTETRRCPREQFPPAVDDGRAMS
SPCEAVQCQFCEQDPPQEAVKTCVTCEVSYCQECLRATHPNKKPFTGHRLTEPVPDARLR
GLACPEHGEEKVNMYCVTDEQLICSLCKLVGHHREHQVAALGERFDKLKQMLDSNLSNLI
KRNSELENLMGKLIQTCQHVEHNAAHQESKLTEECDTLINIVQQRRQIIGTKIKEGKVVR
LRKLAQQIANCKQFVERSSSLIAQADQALKETDHARFLQTAKSISERVSMATASSQVLIP
EINLNDAFDAFALDFSREKKMLEGLDYLTAPNAPTIREELCTASHDTITVHWTSEDEFSV
VSYELQYTISTGQANVVSLCNSMDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKAMNQAGS
RSSPPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDEASSMKSHAQDRFGGTGNYGVT
GNVYIDSGRHYWEVLIGGSTWFAIGIAYKSAPKHSWVGKDSASWVLSRCNTSWAVRHNSK
EFPIEPSPHMRRLGVLLDYDSGSLAFYDGAGTQHLYTFDIAFSQPICPVFSVWNKCLTVL
TGLPIPDHLEISDPHD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggacacactggagtcggagttgacttgcccaatctgtctggagcttttcgaggatcct
ctgctgctgccctgcgcccacagcctgtgcttcaactgcgcccaccgcatcctggtgtcc
cactgcagctcattcgacgagtccaccaaaccgtactccgccttccagtgtcccacctgt
cgctatgtcatcacccttgaccagcagggtctagacggcctcaagcgcaacgtcactctg
cagaacatcatcgaccgcttccagaaggcctctctgagcgggcccaactcgccgaccgag
acccggcgctgcccccgcgagcagttccctccagccgtggatgacggcagggccatgagt
tcaccgtgcgaggcggtgcagtgccagttctgcgagcaggacccgccgcaggaggcggtg
aagacctgcgtcacctgcgaggtttcctactgccaggaatgcctgcgtgcgactcacccc
aataagaagcccttcaccggacaccggctgacggagcccgtgccggacgcgcgtctccga
ggactggcctgtcccgagcacggagaggagaaggtcaacatgtactgtgtgacggacgag
cagctgatctgctctctgtgtaagctggtggggcatcaccgcgaacaccaggtggcggcg
ctgggggagcgattcgacaagctgaagcaaatgttggattccaacctcagcaatttgatc
aagaggaacagcgagctggaaaacctcatggggaagttgatccagacgtgccaacatgtg
gagcacaacgcggctcatcaggagagcaaactgacagaagagtgtgacacgctgatcaac
atcgtacagcagaggagacaaatcatcgggaccaaaataaaagagggaaaagtggttcgg
ctgagaaagctagctcaacagatagctaactgcaaacagtttgtggagagatcgtcctcc
ctcatcgctcaagcggatcaggctctgaaagagaccgatcacgctcgattcctacagact
gcaaagagcatctcagagagagtctcaatggcaacagcgtcctcacaggtcctgattcca
gagatcaacctgaatgacgcgtttgacgcattcgcactggacttttccagagagaagaag
atgctggaaggtctggattatctcacagctccgaacgctcccaccatccgcgaggagctt
tgcacggcatctcacgacaccatcacagtccactggacatcagaggatgaattcagtgtg
gtttcatatgaactccagtataccatctccaccggccaggctaatgtcgtcagtctgtgt
aactcgatggacagctggatgatcgtgcccaacataaagcagaaccactacaccgttcac
ggcctgcagagcggaaccaggtacatcttcatcgtgaaggccatgaatcaggccgggagc
cgcagcagtccgccgggaaaactcaagacaaacagtcagccgtttaagcttgaccccaag
tcggcccacaggaagttaaaggtctcgcatgacaatctgacggtggagcgggacgaagcc
tcgtccatgaagagccacgctcaggaccgcttcggcggcacggggaactacggcgtcaca
gggaatgtgtacatcgacagcgggcggcactactgggaggttctgatcggagggagcaca
tggtttgccattggcatcgcttataaatctgctcccaaacacagctgggtcggtaaggac
tcggcgtcgtgggtcttgagccgctgcaacacctcgtgggccgtgcgtcacaacagtaaa
gagtttcccatcgaaccgtcccctcacatgcggcgtctgggcgtcctgctggactacgac
tccggctctctggcgttctacgacggcgcgggaacacaacacctctacaccttcgacatc
gccttctcacagcccatctgccccgtcttcagcgtgtggaacaagtgcttgaccgtcctg
acggggctgcctattcctgaccacttagagatcagtgacccgcacgactga
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