| Entry |
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| Name |
(RefSeq) DEAD-box helicase 3 X-linked a isoform X1
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| KO |
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| Organism |
cide Ctenopharyngodon idella (grass carp)
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| Pathway |
| cide04622 | RIG-I-like receptor signaling pathway |
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| Brite |
KEGG Orthology (KO) [BR:cide00001]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127519012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cide03019]
127519012
03041 Spliceosome [BR:cide03041]
127519012
03036 Chromosome and associated proteins [BR:cide03036]
127519012
Enzymes [BR:cide01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127519012
Messenger RNA biogenesis [BR:cide03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127519012
mRNA cycle factors
Common to processing body (P body) and stress granule
127519012
Spliceosome [BR:cide03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127519012
Chromosome and associated proteins [BR:cide03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127519012
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:complement(18113399..18127912)
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| AA seq |
729 aa
MSHVVVDGSHGLEQQLAVLDLNSADGQGAGTGRRYIPPHLRNKDVSQNAGNAYSSGRQSG
YSVAPVQSYSPGWDGGRSNGFVNGYHDGRMNGTANFGRGPPRNDRGGRGSFRGSRNGGSF
NQPMHNAGYGTYENKDGGWNSVVNRDAYTSFGGRSDRGKSAFFNDRGAGSRGRYERGGFG
GGTGGNSRWVEESRDEEDWSKPMPPNERLENELFSGSNTGINFEKYDDIPVEATGTNSPG
HIESFHDVDMGEIIMGNINLSRYTRPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLP
VLSQIYTDGPGEALQATKASAQQENGKYVRRKQFPISLVLAPTRELALQIYDEARKFAYR
SRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRM
LDMGFEPQIRRIVEQDTMPPKGARQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTS
ENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIH
GDRSQRDREEALQQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRT
GRVGNLGLATSFYNDKNSNITKDLLDILVEAKQEVPSWLENLAYEHQHKSTNRGRPKRFS
GGFGARDYRQMAGGGNTFGNRGARSAGGHGGNRGFGGNKGGFGSFGGDSYGGNYGNYGGN
YAQVDWWGN |
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| NT seq |
2190 nt +upstreamnt +downstreamnt
atgagtcatgtggtcgtcgacggttcacacggtctagagcagcagcttgctgtcttagac
ttgaactcagctgatggacagggtgctggcactggtcggcgttacattcctcctcatttg
agaaacaaagacgtatcacaaaatgcaggaaatgcttattcctctggtagacagagcggt
tattcagtggcaccagtacagagctattctccaggatgggacggcggtcgtagcaatggt
ttcgtcaatgggtatcatgatggtcgtatgaatgggactgcaaactttggccgtggacct
cctcgcaatgacagaggaggacgtggtagctttcgtggaagcaggaacggtggttccttc
aaccagccaatgcataatgcaggttatggcacttatgagaacaaagatggaggctggaac
tcagtggtaaacagagatgcctacactagctttggtgggcgttctgacagagggaagtct
gcgttcttcaatgacaggggagctggctcaagaggaagatatgagcgtggaggctttgga
ggaggaacaggagggaacagtcgttgggttgaagagtccagagatgaagaggactggtca
aagccaatgccccccaacgagcgtctagaaaatgagctgttctctgggagcaacacaggg
attaactttgagaagtatgatgacattcctgtggaggccactggaacaaactctcctggg
catattgagagtttccatgatgtggatatgggcgagatcattatgggcaacatcaactta
agccgctatacacgccctactcctgttcagaagtatgcaatccccatcatcaaggccaag
agggacctgatggcctgtgcacaaacaggctcggggaagactgcagccttcctgcttcct
gttctcagtcagatctacactgatggacctggagaggcactgcaggccaccaaagccagt
gctcagcaggagaatggaaagtacgtccgtcgtaagcagtttcccatctctctagtcctg
gctccaaccagagaacttgctcttcagatttatgatgaggccagaaagtttgcttatcgc
tccagagtgcgcccgtgtgtagtatacggaggcgcagatataggccagcagatccgtgat
ttggaaagaggctgtcacctgctagtggccacacctggtcgtctggtagacatgatggag
cgaggcaagattggcctggactactgcaaatatctggtgttggatgaggcagacagaatg
cttgatatgggtttcgaaccccagatcagacgtattgtggagcaggacaccatgcctcca
aaaggtgctcgtcagaccatgatgttcagtgccaccttcccgaaagagatccagattctg
gcccgtgactttctggaggagtacatcttcctggctgtgggccgcgtgggctccacctca
gagaacatcacccagaaagtggtttgggtggaagagaatgacaagcgctccttcctcctc
gacctgctcaatgccacaggcaaggattctctcacactggtgtttgtggagactaagaag
ggtgccgacgctcttgaggacttcctctaccgcgagggctatgcctgcaccagtatccat
ggcgaccgctctcagcgtgatcgtgaggaagcgctccagcagttccgttctggacgctgc
cctatcatggttgccactgctgtggctgcacgtggcctggacatctccaatgtgaaacac
gtgatcaattttgacttgcccagtgacattgaggaatacgtccaccgcattggtcgtaca
ggccgtgtgggaaaccttgggctggccacatccttctacaatgataagaacagcaacatc
actaaagatctgctggatatcttggtggaggccaaacaggaggtgccttcctggcttgag
aacctagcctacgagcaccagcacaagagcaccaaccgtgggcgacccaaaagattctct
ggtggctttggggccagggattaccgccagatggctgggggtggaaacacttttggcaac
cgtggtgctcgcagtgctggtggccatggagggaacagaggttttggaggcaataagggt
ggctttgggagtttcggcggtgacagctacgggggcaactatggaaactatggaggaaac
tatgcccaggtggactggtggggcaactaa |
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